CF836278

Overview
NameCF836278
Unique NameCF836278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8966 contig Csv1_Contig8966:228..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP52_ARATH (Putative serine carboxypeptidase-like 52 OS=Arabidopsis thaliana GN=SCPL52 PE=5 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.977e-36
Identity = 73/162 (45.06%), Postives = 103/162 (63.58%), Query Frame = -1
Query:  158 FLPAQPAPKLWCRHQNYL-YAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 640
            FLP    P  +     Y+  A  WAND+ V+ AL I++G + +W RCN ++ Y  +++SS+ YH N    GY+ LIYSGD DME+P++ TE WI+SLN  I   W+PW+++ Q+AG+ M YA K    +T+AT+K +GHTA EYKP E   M  RW +  PL
Sbjct:   28 FLPGFEGPLPFELETGYIGIAKYWANDERVREALQIRKGSIGKWIRCNSNIHYDDDIISSIPYHMNNSINGYRSLIYSGDHDMEVPFLATEAWIRSLNYPIIDDWRPWIINNQIAGYTMTYANK----MTYATIKASGHTA-EYKPAESFIMFQRWISGQPL 184          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.807e-36
Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    YL    WAND++VQRAL + +G + EW RC   + Y  ++ SS+ YH N    GY  LI+SGD DME+PY+GT+ WI+SLN ++   W+PW++  Q+AG+   YA K    + FAT+KG GHT PEYKP+E   M  RW +  PL
Sbjct:  293 CYMYRYLLTTYWANDENVQRALHVNKGSIGEWVRCYFEIPYNHDIKSSVPYHMNNSIDGYASLIFSGDHDMEVPYLGTQAWIRSLNYSLIDDWRPWMIGDQIAGYTRTYANK----MAFATIKGGGHT-PEYKPEESYIMFQRWISGQPL 437          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.020e-35
Identity = 69/139 (49.64%), Postives = 98/139 (70.50%), Query Frame = -1
Query:  158 WANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 574
            WAN+KSV++AL + EG V++W RCN  ++Y  ++ SS+ YH+ +  +GY+ L++SGD DM +P++GT+ WI+SLN +I   W+PW+V  QVAG+   YA K    +TFATVKG GHT+ EYKP E   MI RW +  PL
Sbjct:  304 WANEKSVRKALLVNEGTVRKWIRCNTEIAYNKDIRSSVPYHKYISIEGYRSLVFSGDHDMLVPFLGTQAWIRSLNYSIVDDWRPWMVQNQVAGYTRTYANK----MTFATVKGGGHTS-EYKPVETYIMIKRWLSGQPL 437          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.060e-35
Identity = 73/151 (48.34%), Postives = 94/151 (62.25%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRN-LIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    YL A  WAND+ V+R L + +G + +W RCN  L Y  ++ SS+ YHRN  I   Y+ L+YS D DM +PY+GTE WIKSLN +I   W+PW V+ QV G+   YA      +TFAT+KG GHTA EYKP+E   M  RW +  PL
Sbjct:  319 CYMYRYLLASHWANDEDVRRELHVVKGSIGKWMRCNWDLPYEKDIKSSVPYHRNNSIIGDYRSLVYSSDHDMMVPYIGTEAWIKSLNYSITDDWRPWFVNNQVIGYTRTYAN----NMTFATIKGGGHTA-EYKPEESFMMFQRWISGRPL 464          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34
Identity = 69/144 (47.92%), Postives = 94/144 (65.28%), Query Frame = -1
Query:  176 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRW 607
            C    Y  +  W ND++V++AL I +  ++EW+RC+ S  YT +++SS+ YH N    GY+ LI+SGD D E+P +GT+ WIKSLN  I   W+PW+++ QVAG+   YA K    +TFATVKG GHTA EYKP E   M  RW
Sbjct:  297 CYIYRYSLSHYWVNDETVRKALQINKESIREWKRCDWSKPYTKDIISSVPYHMNNSINGYRSLIFSGDHDFEVPLIGTQVWIKSLNYAIVDKWRPWMINNQVAGYTRTYANK----MTFATVKGGGHTA-EYKPDETFIMFQRW 435          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.595e-34
Identity = 65/150 (43.33%), Postives = 97/150 (64.67%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C +  Y     WAND+SV+ AL I++G   +W RCN+++ Y  +++SS+ YH N    GY+ LIYSGD D+ +P++ T+ WI+SLN +    W+PW+++ Q+AG+   Y+ K    +TFAT+KG GHTA EY+P E   M  RW +  PL
Sbjct:  289 CYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNK----MTFATIKGGGHTA-EYRPNETFIMFQRWISGQPL 433          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.595e-34
Identity = 68/150 (45.33%), Postives = 94/150 (62.67%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    YL    WAND +V+ AL I +  + EW RC +++ Y  ++ SS+ YH N    GY+ LIYSGD D+E+PY+GT+ WI+SLN +I   W+PW++  Q+AG+   YA K    +TFAT+KG GHT  E+KP+E   M  RW    PL
Sbjct:  297 CYIYRYLLTTYWANDATVREALQINKESIGEWVRCYRTIPYDNDIKSSMPYHVNNSISGYRSLIYSGDHDLEVPYLGTQAWIRSLNYSIIDDWRPWMIKNQIAGYTRTYANK----MTFATIKGGGHTI-EFKPEEASIMFQRWINGQPL 441          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.307e-34
Identity = 71/150 (47.33%), Postives = 92/150 (61.33%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    YL    WAND +V+ AL I +  + EW RC  S+ Y  ++ SS+ YH N    GY+ LIYSGD D E+PY+GT+ WI+SLN +I   W+PW+V  Q+AG+   YA K    +TFAT+KG GHTA E KP+E   M  RW    PL
Sbjct:  297 CYIYRYLLTTYWANDATVREALQINKESIGEWVRCYYSIPYNNDIKSSMPYHVNNSISGYRSLIYSGDHDFEVPYLGTQAWIRSLNYSIIDDWRPWMVKNQIAGYTRTYANK----MTFATIKGGGHTA-ESKPEEASIMFQRWINGQPL 441          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33
Identity = 65/150 (43.33%), Postives = 96/150 (64.00%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    +L A  WAND++V++AL I++  + EW RC+  + Y  ++ SS+ YH N    GY+ LIYSGD D E+P++GT+ WI+SLN ++   W+PW++  Q+AG+   YA K    +TFAT++G GHT  E+KP+E   M  RW    PL
Sbjct:  297 CYIYRFLLAAYWANDETVRKALQIKKETIGEWVRCHYGIPYNYDIKSSIPYHMNNSINGYRSLIYSGDHDFEVPFLGTQAWIRSLNYSVIDDWRPWMIKDQIAGYTRTYANK----MTFATIRGGGHTI-EFKPEEASIMFQRWIKGQPL 441          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 67/151 (44.37%), Postives = 98/151 (64.90%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCN-KSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    Y     WAN+KSV+ AL + +G + +W +CN K++SY  ++ SS+ YH      GY+ LIY+GD DM +P++ T+ WI+SLN +I   W+PW+++ Q+AG+   Y+ K    +TFAT+KG+GHTA EYKPKE   M  RW +  PL
Sbjct:  285 CFLYRYTLITFWANNKSVREALQVNKGSIGKWVQCNYKNISYNYDIKSSVAYHMKNSIDGYRSLIYNGDHDMMVPFLATQAWIRSLNYSITDDWKPWMINDQIAGYTRSYSNK----MTFATIKGSGHTA-EYKPKETSIMFKRWISAQPL 430          
The following BLAST results are available for this feature:
BLAST of CF836278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SCP52_ARATH5.977e-3645.06Putative serine carboxypeptidase-like 52 OS=Arabid... [more]
SCP7_ARATH7.807e-3646.67Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP17_ARATH1.020e-3549.64Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP18_ARATH5.060e-3548.34Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP6_ARATH1.127e-3447.92Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]
SCP8_ARATH5.595e-3443.33Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP2_ARATH5.595e-3445.33Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
SCP1_ARATH7.307e-3447.33Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCP3_ARATH2.777e-3343.33Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]
SCP13_ARATH3.626e-3344.37Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836278 ID=CF836278; Name=CF836278; organism=Citrus sinensis; type=EST; length=715bp
TTTTTTTTTTTTTTAATACATTAATTTAATATTATATAAAATCCATATAG
TACAGAATAGCGCTAAACACTGTATAAAATTATTCTAATATAATATTAAT
ACAATACAACATAATCCAATACATTTGGATATTCTCAAAGTACTGAACAT
GGCTTCAGAGAGGATACATGGCAAACCACCTGTTAATCATTTCGAGGCAT
TCCTTAGGCTTGTACTCTGGAGCTGTATGACCTGCTCCCTTTACTGTGGC
AAATGTCAAACGGTAAAGGTTCTTTTCAGCATACCGCATCCAAAATCCTG
CAACTTGGCCGTCCACAAGCCATGGCTGCCAGCCACTATCAATCGTCAAA
TTTAATGACTTAATCCATGTTTCTGTGCCTACATATGGAATTTCCATGTC
CACATCGCCACTGTAAATCAAAACTTGGTAGCCCTTCTTGATGAGGTTGC
GATGATAATCAAGACTACTAAGGACATTTGTTGTGTAAGATAAACTCTTA
TTGCATCTCCTCCATTCTTTTACCATCCCCTCCTGAATTCCAAGAGCCCT
TTGGACAGATTTGTCATTTGCCCATGTTGGAGCGTATAAATAGTTTTGAT
GCCGACACCAAAGTTTTGGAGCTGGCTGAGCTGGCAAAAAGAGCAAATCT
AAATAATCTTCTTCATCTTCCACGACGCTACCATCTCGGGGGCTCAATCG
TGTTGGTTTTGGGGA
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