CF836281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836281 vs. ExPASy Swiss-Prot
Match: ILV5_ARATH (Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=At3g58610 PE=2 SV=2) HSP 1 Score: 296.204 bits (757), Expect = 1.141e-79 Identity = 157/231 (67.97%), Postives = 178/231 (77.06%), Query Frame = 1 Query: 31 SPNLVHRRLYETLKGAFKHLNLAFFSSTAKSLRALKTT----RGRGSALGAQMASETALKTPFLLDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSRMKPNSIXXXXXXXXXXXXQSMGLDFPKNIGVIAVCPK 711 SP+ + L+ + N+ F SS++KSLR+L T GS+L A+M S +A+K P LDFETSVFKK+ +SLA +E+IVRGGRDLFK LPDAF GI QIGVIGWGSQGPAQAQNLRDSL EAKSDIVVK+GLRKGSRSF EARAAGFTEE+GTLGDI+ETI+GSDLVLLLISDAAQADNYEKIFS MKPNSI QS GLDFPKNI V+AVCPK Sbjct: 16 SPSSSSKTLWSSKARTLALPNIGFLSSSSKSLRSLTATVAGNGATGSSLAARMVSSSAVKAPVSLDFETSVFKKEKVSLAGYEEYIVRGGRDLFKHLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKIGLRKGSRSFEEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSSGLDFPKNISVVAVCPK 246
BLAST of CF836281 vs. ExPASy Swiss-Prot
Match: ILV5_SPIOL (Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea GN=AHRI PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.216e-74 Identity = 148/219 (67.58%), Postives = 169/219 (77.17%), Query Frame = 1 Query: 88 LNLAFF--SSTAKSLRALKTTR-------GRGSALGAQMASETALKTPFL--LDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSRMKPNSIXXXXXXXXXXXXQSMGLDFPKNIGVIAVCPK 711 LNL F SST K+ R+LK R G GSAL AQM S ++ TP DF++SVFKK+ ++L+ DE+IVRGGR+LF LLPDAF GI QIGVIGWGSQ PAQAQNL+DSL EAKSD+VVK+GLRKGS SFAEARAAGF+EENGTLGD++ETISGSDLVLLLISD+AQADNYEK+FS MKPNSI QS+G DFPKNI VIAVCPK Sbjct: 34 LNLGFLGSSSTIKACRSLKAARVLPSGANGGGSALSAQMVSAPSINTPSATTFDFDSSVFKKEKVTLSGHDEYIVRGGRNLFPLLPDAFKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLISDSAQADNYEKVFSHMKPNSILGLSHGFLLGHLQSLGQDFPKNISVIAVCPK 252
BLAST of CF836281 vs. ExPASy Swiss-Prot
Match: ILV5_PEA (Ketol-acid reductoisomerase, chloroplastic OS=Pisum sativum GN=PGAAIR PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.084e-73 Identity = 147/221 (66.52%), Postives = 167/221 (75.57%), Query Frame = 1 Query: 49 RRLYETLKGAFKHLNLAFFSSTAKSLRALKTTRGRGSALGAQMASETALKTPFLLDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSRMKPNSIXXXXXXXXXXXXQSMGLDFPKNIGVIAVCPK 711 + L + + +F NL+F + +S+RA ++ GSALGA S P LDFETSVFKK+ ++LA +E+IVRGGRDLF LLPDAF GI QIGVIGWGSQGPAQAQNLRDSL EAKSDIVVKVGLRKGS SF EAR AGF+EE GTLGDI+ETISGSDLVLLLISD+AQADNYEKIFS +KPNSI QS+GLDFPKN VIAVCPK Sbjct: 17 KTLAKPVAASFAPTNLSFSKLSPQSIRARRSITV-GSALGATKVSAPPATHPVSLDFETSVFKKERVNLAGHEEYIVRGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKVGLRKGSSSFNEAREAGFSEEKGTLGDIWETISGSDLVLLLISDSAQADNYEKIFSHLKPNSILGLSHGFLLGHLQSIGLDFPKNFSVIAVCPK 236
BLAST of CF836281 vs. ExPASy Swiss-Prot
Match: ILV5_ORYSJ (Ketol-acid reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0573700 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.826e-69 Identity = 139/195 (71.28%), Postives = 153/195 (78.46%), Query Frame = 1 Query: 127 RALKTTRGRGSALGAQMASETALKTPFLLDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSRMKPNSIXXXXXXXXXXXXQSMGLDFPKNIGVIAVCPK 711 RA+ A+GA M S LDF+TSVF K+ +SLA +E+IVRGGR+LF LLP+AF GI QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK+GLRKGS+SF EARAAGFTEE+GTLGDI+ET+SGSDLVLLLISDAAQADNYEKIFS MKPNSI QS GLDFPKNI VIAVCPK Sbjct: 49 RAVTAMVAAPPAVGAAMPS---------LDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPK 234 The following BLAST results are available for this feature:
BLAST of CF836281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836281 ID=CF836281; Name=CF836281; organism=Citrus sinensis; type=EST; length=712bpback to top |