CF836289

Overview
NameCF836289
Unique NameCF836289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:897..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.500e-68
Identity = 121/134 (90.30%), Postives = 130/134 (97.01%), Query Frame = -1
Query:  316 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 717
            QQKEHPKFKRKGDDLFVEHTLSL E+LCGFQF++THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFM+GKLYIHFSV+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  256 QQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.531e-66
Identity = 116/134 (86.57%), Postives = 126/134 (94.03%), Query Frame = -1
Query:  316 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 717
            QQKEHPKFKRKGDDLF EH+LSLTEALCGFQFV+THLD RQLLIKS PGEV+KPDQFK INDEGMPMYQRPFMRGKLYIHFSVDFP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  258 QQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 6.178e-65
Identity = 116/134 (86.57%), Postives = 126/134 (94.03%), Query Frame = -1
Query:  316 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 717
            QQKEHPKF+RKGDDLF +HTLSLTEALCGFQFV+THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI F VDFP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  237 QQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.197e-62
Identity = 111/134 (82.84%), Postives = 125/134 (93.28%), Query Frame = -1
Query:  316 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 717
            QQKEHPKFKRKG+DLFVEHTLSLTEALCGFQFV+THLDGR LLIKS PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHF+V+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  258 QQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.412e-61
Identity = 109/134 (81.34%), Postives = 124/134 (92.54%), Query Frame = -1
Query:  316 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 717
            QQKEHPKFKRKG+DLF EHTLSLTEALCGF+FV+THLDGRQLLIKS  GEVVKPDQFKAI DEGMP+YQRPFM+GK+YIHF+V+FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  258 QQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 9.232e-61
Identity = 107/134 (79.85%), Postives = 124/134 (92.54%), Query Frame = -1
Query:  316 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 717
            QQKEHPKFKRKG+DLFVEHT+SLTEALCGFQFV+THLD RQLLIKS+PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHF+V+FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  259 QQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.537e-26
Identity = 61/134 (45.52%), Postives = 88/134 (65.67%), Query Frame = -1
Query:  319 QKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 714
            QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  245 QKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.537e-26
Identity = 61/134 (45.52%), Postives = 88/134 (65.67%), Query Frame = -1
Query:  319 QKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 714
            QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  244 QKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 373          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.537e-26
Identity = 61/134 (45.52%), Postives = 88/134 (65.67%), Query Frame = -1
Query:  319 QKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 714
            QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  245 QKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.537e-26
Identity = 61/134 (45.52%), Postives = 88/134 (65.67%), Query Frame = -1
Query:  319 QKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 714
            QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  245 QKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
The following BLAST results are available for this feature:
BLAST of CF836289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DNJH_CUCSA3.500e-6890.30DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO9.531e-6686.57DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO6.178e-6586.57DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH2.197e-6282.84Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU5.412e-6181.34DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH9.232e-6179.85Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA1_RAT2.537e-2645.52DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB2.537e-2645.52DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE2.537e-2645.52DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN2.537e-2645.52DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L18_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836289 ID=CF836289; Name=CF836289; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTTTTTTTTTTTTATTGTAACACTAAAAATATTAATTATGAGCATT
GAGTCTGAAGGTGCAAACGCTAGAATTCCATTACATAGTCAGTTATCAGA
AAAACATAAGAATAAAGACAGACAAACCAAAACTAGAACCTCTAAAGCCT
ATAACAGAAAATAAATATGTTGAGAATCTTTTTCTCCCAAACAATGAAAA
TACTAAATCAGGCCACCCCTTTTCTTCTACATCATCACTGCTGAGCACAC
TGCACTCTCTGGGCACCACCTTGCATATCGTCATCTTCATCGTATGCCTC
CTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTCCTCAATGTTCACATCAT
GCAGGGTTGTTTCTTCACACTCATCCAGTTCCATATCGGTGAGCTGGACT
GAGGTCCTTGGAGGTAGTACGGTCTCCAGCATCTTGCACTGGTCTGGGCT
CAGTGACTCAGGGAAGTCAACACTGAAATGAATGTACAGTTTGCCCCTCA
TAAATGGCCTCTGATACATAGGCATTCCTTCATCATTTATGGCCTTGAAT
TGGTCCGGCTTGACTACTTCCCCAGGCTGGGATTTGATGAGGAGTTGCCG
GCCATCCAAATGAGTTATTACAAATTGAAAGCCACAGAGAGCTTCTGTCA
GTGACAGGGTGTGCTCAACAAATAGGTCATCACCCTTTCGCTTAAATTTC
GGGTGCTCTTTCTGTTG
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