CF836436

Overview
NameCF836436
Unique NameCF836436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: NB5R4_MOUSE (Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r4 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.651e-27
Identity = 58/131 (44.27%), Postives = 89/131 (67.94%), Query Frame = 2
Query:  185 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            + + +  A G+  +V+S+    R+KVP ++G S +DW+RLT++  DL GLKG   +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG D LM+A G D T LFN+ H WVN E +L++CLVG +
Sbjct:    4 VPSQAFPAPGSQQRVSSQ---GRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGGLIE--VTEEELKKHNKKEDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGADGTDLFNEVHRWVNYESMLKECLVGRM 129          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: NB5R4_RAT (Cytochrome b5 reductase 4 OS=Rattus norvegicus GN=Cyb5r4 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = 2
Query:  185 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            + + +  A G+  +VAS+    R+KVP ++G S +DW RLT++  D  GLKG   +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG D LM+A G D T LFN+ H WVN E +L++CLVG +
Sbjct:    4 VPSQAFPAPGSQQRVASQ---GRSKVPLKQGRSLMDWFRLTKSGKDFTGLKGGLIE--VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGADGTDLFNEVHRWVNYESMLKECLVGRM 129          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: NB5R4_HUMAN (Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 58/131 (44.27%), Postives = 88/131 (67.18%), Query Frame = 2
Query:  185 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            + + S  A  +  +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG D LM+A G D T LF++ H WVN E +L++CLVG +
Sbjct:    4 VPSQSFPAPRSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE--VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRM 129          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: NB5R4_DANRE (Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.287e-26
Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = 2
Query:  185 IDASSSSAAGTSVKVASRKPA--SRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            + + +  AAG+  +VA   PA  SR KV  + G+S +DW+RLT++  DL GL+G+  +  +T DE+K+H ++   WT ++G VYNLS YM FHPGG + LM+A G D T LF++ H WVN E +L++CLVG +
Sbjct:    4 VPSQAFPAAGSQQRVA---PAGQSRNKVVLKPGHSLLDWIRLTKSGQDLTGLRGRLIE--VTEDELKKHNTKKDCWTCIRGMVYNLSAYMDFHPGGEEELMRAAGIDSTDLFDEVHRWVNYESMLKECLVGRM 131          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: NB5R4_BOVIN (Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.287e-26
Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 2
Query:  185 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            + + S     +  +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG D LM+A G D T LF++ H WVN E +L++CLVG +
Sbjct:    4 VPSQSFPGPSSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE--VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTDLFDQVHRWVNYESMLKECLVGRM 129          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 55/131 (41.98%), Postives = 86/131 (65.65%), Query Frame = 2
Query:  185 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            + + S  A  +  +VA+     R+KVP + G S +DW+RLT++  DL GLKG+     +T +E+ QH  +   W  ++G VYN++PYM++HPGG + LMKA G+D T LF++ H WVN E +L++CL+G +
Sbjct:    4 VPSQSFPAPSSQQRVAA---IGRSKVPLKPGRSLMDWIRLTKSGKDLTGLKGRLID--VTEEELAQHNKKEDCWICIRGMVYNITPYMEYHPGGEEELMKAAGRDGTDLFDQVHRWVNYESMLKECLIGRM 129          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: YDAA_SCHPO (Uncharacterized protein C1F12.10c OS=Schizosaccharomyces pombe GN=SPAC1F12.10c PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 42/127 (33.07%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  203 SAAGTSVKVASRKPAS--RAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            S A ++V+ + ++P    R K     G+SQ++W +L  +  +L+G++       +T +E+ +H+++   W  ++G+VYN+S Y+ +HP G   ++   G+D T +F K+HAWVN E LL+   VG L
Sbjct:   23 SPASSNVEHSEKQPRRDFRVKKYVAPGFSQLNWSKLVASGQNLSGVEKPIP---VTKEELAKHKTKEDCWIAIRGKVYNVSAYLPYHPAGQKRILDYAGRDATVIFMKFHAWVNEEALLKTSFVGFL 146          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: YMW3_YEAST (Uncharacterized heme-binding protein YMR073C OS=Saccharomyces cerevisiae GN=YMR073C PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 56/174 (32.18%), Postives = 81/174 (46.55%), Query Frame = 2
Query:  179 NVIDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLT-------------QTHPDL---------------AGLKGQSNKRLITMDE-----------VKQH-QSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMK-AVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            +V   + SS     +  +SRKP  R K+  + G+S +DW  LT             Q   DL               + LK Q   + I + +           VK+H + E  +W V+ G+VY++S Y+KFHPGG D+L+K     D    FNKYH WVN E LL+ C +G +
Sbjct:   26 SVAHPAISSPLHMPMSKSSRKPLVRTKIRLDPGHSALDWHSLTSNPANYYTKFVSLQLIQDLLDDPVFQKDNFKFSPSQLKNQLLVQKIPLYKIMPPLRINRKIVKKHCKGEDELWCVINGKVYDISSYLKFHPGGTDILIKHRNSDDLITYFNKYHQWVNYEKLLQVCFIGVV 199          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: YJ83_SCHPO (Uncharacterized heme-binding protein C330.03c OS=Schizosaccharomyces pombe GN=SPCC330.03c PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 41/130 (31.54%), Postives = 72/130 (55.38%), Query Frame = 2
Query:  188 DASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            +A+S    G   +   +K  ++ K+P   G++Q DW  L  +  +L+G++   +   +T +E+ +H S    W  ++G+VYN++ Y+ +HP G   ++K  G D T  + K+H WVN E LL+   VG L
Sbjct:   20 EANSKDTKGLKEERKRKKRKNKYKIP--PGHTQQDWDALVASGKNLSGVESPIS---VTAEELAKHCSPDDCWMAIRGKVYNVTAYLPYHPVGPKKILKHSGVDATKPYLKHHDWVNEEELLKTSFVGYL 144          
BLAST of CF836436 vs. ExPASy Swiss-Prot
Match: FAD5_MORAP (Delta(5) fatty acid desaturase OS=Mortierella alpina GN=DES1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 29/80 (36.25%), Postives = 51/80 (63.75%), Query Frame = 2
Query:  338 GQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 577
            G    +  T +E+  H ++G ++  ++GRVY+++ ++  HPGGVD L+   G+D T +F  YHA+  A+ +++K  VGTL
Sbjct:    2 GTDQGKTFTWEELAAHNTKGDLFLAIRGRVYDVTKFLSRHPGGVDTLLLGAGRDVTPVFEMYHAFGAADAIMKKYYVGTL 81          
The following BLAST results are available for this feature:
BLAST of CF836436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
NB5R4_MOUSE8.651e-2744.27Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r... [more]
NB5R4_RAT1.476e-2644.27Cytochrome b5 reductase 4 OS=Rattus norvegicus GN=... [more]
NB5R4_HUMAN1.476e-2644.27Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R... [more]
NB5R4_DANRE3.287e-2645.86Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4... [more]
NB5R4_BOVIN3.287e-2643.51Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 ... [more]
NB5R4_XENTR2.131e-2541.98Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN... [more]
YDAA_SCHPO6.214e-1733.07Uncharacterized protein C1F12.10c OS=Schizosacchar... [more]
YMW3_YEAST1.296e-1432.18Uncharacterized heme-binding protein YMR073C OS=Sa... [more]
YJ83_SCHPO2.210e-1431.54Uncharacterized heme-binding protein C330.03c OS=S... [more]
FAD5_MORAP1.341e-1136.25Delta(5) fatty acid desaturase OS=Mortierella alpi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02P11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836436 ID=CF836436; Name=CF836436; organism=Citrus sinensis; type=EST; length=715bp
TGTAAACGCTGAAAGACTTGGAGAGATGAACAACGATAACGATTTCACAT
TTTGCAAGGTCGAAAAGAATCAAAGTTCAGATGCTGATGGTAGTGTCGAA
AATCAAAGCAGCGGGTTTTTATGGAAACAAGATGAATTGCCTTCAAAGAC
GAATAAGACGGTGGGGTTTTTGTCGTATAATGTTATTGATGCATCGTCTT
CATCAGCAGCTGGAACTTCTGTGAAAGTTGCGAGTCGTAAGCCGGCGTCT
CGGGCCAAGGTTCCTTTTGAGAAGGGCTATAGCCAAGTGGATTGGCTTAG
GCTTACTCAAACTCATCCTGATCTTGCAGGTTTGAAGGGACAATCAAATA
AGAGGCTGATAACCATGGATGAAGTTAAACAGCATCAGAGTGAAGGTTCC
ATGTGGACTGTCTTAAAAGGTCGTGTATACAATTTATCTCCGTACATGAA
GTTTCACCCTGGAGGTGTTGATATGCTGATGAAGGCGGTGGGTAAAGACT
GTACGGCTTTGTTCAATAAATACCATGCTTGGGTAAACGCCGAGTTTTTA
TTGGAGAAGTGCCTTGTGGGCACTCTGGATGATAGTCGACCAAGGCAGTG
ATACTCAGCCAACTTAGAAGTGATTCTTTGCCCATGTAATCTTACCATAC
TCCCTGGCCCCAACATTCTACTTTCCATGTTTTTGTTATACAGCATAACC
ATTCAACCCCTTTTT
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