CF836437

Overview
NameCF836437
Unique NameCF836437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.264e-34
Identity = 90/177 (50.85%), Postives = 108/177 (61.02%), Query Frame = -3
Query:  257 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASSSNNYPSEYGIFPGFDDLSN----DIFTPQL-PAVDF---ADENF-DGLLLNQDSFLWNF 760
            IRLPNSR RIWLGSYDT EKAARAFDAAL+CLRG +AKFNFPDNPP ISGGR+L  SEI+  AA+FANS      S   +  E++ E  S S+             D   L +L    S N+ SE+G+FPGFDD S+    D F  QL P  D+    +E + DG +     FLWNF
Sbjct:   27 IRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFPDNPPVISGGRNLSRSEIREAAARFANS--AEDDSSGGAGYEIRQESASTSMD-----------VDSEFLSMLPTVGSGNFASEFGLFPGFDDFSDEYSGDRFREQLSPTQDYYQLGEETYADGSM-----FLWNF 185          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.651e-29
Identity = 85/176 (48.30%), Postives = 102/176 (57.95%), Query Frame = -3
Query:  257 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQS----VSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASSSNNYPSEYGIFPGFDDLS----NDIFTPQLPAVDFADENFDGLLLNQDSFLWNF 760
            IRLP+SR RIWLGSYDT EKAARAFDAA FCLRG  A FNFP+NPP IS  +SL P EIQ  AA+FAN+     +  E+S     SE++ E  S S S AT  +D    +D S LDLL        P  +G     DD S     D FT  LP  D+  E+    LL++   LW+F
Sbjct:   36 IRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPGSEIRPESPSTSASVATSTVD----YDFSFLDLL--------PMNFGFDSFSDDFSGFSGGDRFTEILPIEDYGGES----LLDESLILWDF 195          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF016 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.074e-25
Identity = 57/79 (72.15%), Postives = 65/79 (82.28%), Query Frame = -3
Query:  524 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQ 760
            IRLPNSR RIWLGS+D+AEKAARAFDAAL+CLRG  A+FNFPDNPP+I GGRSL P +IQ VA++FA  E L    PEQ
Sbjct:   22 IRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDNPPEIPGGRSLTPQQIQVVASRFACEEEL--LPPEQ 98          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: ERF12_ARATH (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana GN=ERF012 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15
Identity = 65/185 (35.14%), Postives = 85/185 (45.95%), Query Frame = -3
Query:  257 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPD-------ISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFD-------GSLLD---LLTASSSNNYPSEYGIFPGFDDLSNDIFTPQLPAVDFADENFDGLLLNQDSFLWNF 760
            IR PN + RIWLGSY TAE AARA+D AL CL+G  A  NFP +          +     L P  IQ VAAQ ANS                  + +P+ S  +   D D   D       GS +D    L  S+S+ Y    G+F  FD+ +   ++PQL +    DE F     + D  LW+F
Sbjct:   65 IRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFPTSSSSHHLLDNLLDENTLLSPKSIQRVAAQAANS----------------FNHFAPTSSAVSSPSDHDHHHDDGMQSLMGSFVDNHVSLMDSTSSWYDDHNGMFL-FDNGAPFNYSPQLNSTTMLDEYF---YEDADIPLWSF 229          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.209e-14
Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = -3
Query:  257 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA-------------NSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASS-SNNYPSEYGIFPGFDDLSNDIFTPQLPAVDFADENF----DGLLLN---QDSFLWNF 760
            IR P  ++RIWLG++ TAE AARA D A   ++G SA  NFP+    +    SL   +IQA AA+ A             +S PL+++   + + +  +   S S S ++    S  +  G L D++   S  NN   +  +   +D L   +  P  P +D  + +F    D +LL+   ++SFLWN+
Sbjct:   41 IREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDSTPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSLENNVKYDCAL---YDSLEGLVSMP--PWLDATENDFRYGDDSVLLDPCLKESFLWNY 224          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.578e-13
Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = -3
Query:  554 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFP-DNPPDISGG--RSLKPSEIQAVAAQFANS 760
            IR+P +  RIWLGSYD  EKAARA+DAALFC+RG    +NFP D  P +  G  R L   +IQ +A  +A+S
Sbjct:   42 IRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDKKPQLPEGSVRPLSKLDIQTIATNYASS 113          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: ERF13_ARATH (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF013 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 54/126 (42.86%), Postives = 64/126 (50.79%), Query Frame = -3
Query:  419 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD----NP--PDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYL----SPSISEATVQLDSD--GVFDGSLLDLL 760
            IR PN + RIWLGSY TAE AARA+DAAL CL+G  A  NFP+    +P   +I     L P  IQ VAAQ ANS       P         + L    S S S A+   D D     DG L+ L+
Sbjct:   58 IRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAANSSSDHFTPPSDENDHDHDDGLDHHPSASSSAASSPPDDDHHNDDDGDLVSLM 183          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF014 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 66/180 (36.67%), Postives = 82/180 (45.56%), Query Frame = -3
Query:  257 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA-KFNFPD---------NPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASSSNNYPSEYGIFPGFDDLS--NDIFTPQLPAVDFADENFDGLLLNQDSFLWNF 760
            IR PN + RIWLGSY TAE AARA+DAAL CL+G SA   NFP+         N  D +   S K  +  A AA  AN++P  S     SVS       SP  SE    + S   +D  +       S +   S Y  F G D     N +  P L     +D+ F+      D  LWNF
Sbjct:   50 IRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAANTDPSSS-----SVSTSSPLLSSP--SEDLYDVVSMSQYDQQV-------SLSESSSWYNCFDGDDQFMFINGVSAPYL-TTSLSDDFFE----EGDIRLWNF 210          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: DRE1F_ORYSJ (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica GN=DREB1F PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = -3
Query:  440 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRG-RSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEAT------VQLDSDGVFD 760
            +R P ++ARIWLG+Y T E AARA D A   LRG R A+ NFPD+P  +   R+  P +I+  AAQ A  E  R   P  ++ E   E  S   + AT      V +D D +FD
Sbjct:   63 VREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASPEDIRLAAAQAA--ELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFD 174          
BLAST of CF836437 vs. ExPASy Swiss-Prot
Match: DRE1F_ORYSI (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica GN=DREB1F PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = -3
Query:  440 IRLPNSRARIWLGSYDTAEKAARAFDAALFCLRG-RSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEAT------VQLDSDGVFD 760
            +R P ++ARIWLG+Y T E AARA D A   LRG R A+ NFPD+P  +   R+  P +I+  AAQ A  E  R   P  ++ E   E  S   + AT      V +D D +FD
Sbjct:   63 VREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASPEDIRLAAAQAA--ELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFD 174          
The following BLAST results are available for this feature:
BLAST of CF836437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ERF17_ARATH1.264e-3450.85Ethylene-responsive transcription factor ERF017 OS... [more]
ERF18_ARATH4.651e-2948.30Ethylene-responsive transcription factor ERF018 OS... [more]
ERF16_ARATH4.074e-2572.15Ethylene-responsive transcription factor ERF016 OS... [more]
ERF12_ARATH8.515e-1535.14Ethylene-responsive transcription factor ERF012 OS... [more]
ERF42_ARATH7.209e-1430.69Ethylene-responsive transcription factor ERF042 OS... [more]
ERF15_ARATH3.578e-1352.78Ethylene-responsive transcription factor ERF015 OS... [more]
ERF13_ARATH4.673e-1342.86Ethylene-responsive transcription factor ERF013 OS... [more]
ERF14_ARATH1.776e-1236.67Ethylene-responsive transcription factor ERF014 OS... [more]
DRE1F_ORYSJ1.776e-1241.23Dehydration-responsive element-binding protein 1F ... [more]
DRE1F_ORYSI1.776e-1241.23Dehydration-responsive element-binding protein 1F ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02P12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02P12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836437 ID=CF836437; Name=CF836437; organism=Citrus sinensis; type=EST; length=762bp
TTTTTTTTTTTTTTTTTAACTTTAAAAATGATTTATTCATTTATTTGAAA
TAAAATCTAATACAATTCAATTTTCTTCCGATCAATAAAAAAATTTACAA
CTTCGTAATTTTTTTTTTCCAATCGAATGATATGTTTACTCGTACTCGAT
TACTAATGAAGGATGACCGTACAAAAAATGGTCTATCCAAACCCAAATTA
TCAGATACTCCGGAATCTAAAACTGTCCAGAGTTCTGACCTCACATTACT
AATTTAAAAATTCCAAAGAAATGAATCTTGATTTAACAATAGCCCATCAA
AATTCTCGTCTGCAAAATCAACAGCTGGGAGTTGCGGAGTAAAAATGTCA
TTAGACAGGTCATCAAACCCAGGAAATATCCCATATTCGGAAGGGTAGTT
ATTGGAACTCGATGCCGTTAAAAGATCCAATAAAGACCCGTCAAAAACCC
CATCGCTGTCCAACTGAACCGTTGCCTCAGAAATCGACGGCGATAAGTAC
TCCGTTTGCAATTCGGACACCGACTGTTCTGGTGATTGACTCCTCAGCGG
CTCCGAATTCGCGAACTGAGCCGCCACAGCTTGAATCTCAGATGGCTTAA
GTGAGCGCCCGCCTGATATGTCGGGTGGGTTGTCCGGGAAATTAAACTTG
GCTGATCGGCCACGTAAGCAAAACAAAGCAGCGTCGAAAGCACGCGCTGC
TTTTTCTGCTGTGTCGTAGGAGCCCAGCCAGATACGGGCACGGCTGTTGG
GTAGTCTGATTT
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