CF836438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.215e-45 Identity = 106/203 (52.22%), Postives = 128/203 (63.05%), Query Frame = 2 Query: 134 VEKPAEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASSSNNYPSEYGIFPGFDDLSN----DIFTPQL-PAVDF---ADENF-DGLLLNQDSFLWNF 715 +E + S+YKGVRKRKWGK+VSEIRLPNSR RIWLGSYDT EKAARAFDAAL+CLRG +AKFNFPDNPP ISGGR+L SEI+ AA+FANS S + E++ E S S+ D L +L S N+ SE+G+FPGFDD S+ D F QL P D+ +E + DG + FLWNF Sbjct: 1 MEGSSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFPDNPPVISGGRNLSRSEIREAAARFANS--AEDDSSGGAGYEIRQESASTSMD-----------VDSEFLSMLPTVGSGNFASEFGLFPGFDDFSDEYSGDRFREQLSPTQDYYQLGEETYADGSM-----FLWNF 185
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.033e-39 Identity = 104/211 (49.29%), Postives = 127/211 (60.19%), Query Frame = 2 Query: 119 MVKHAVEKPAE----GSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQS----VSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASSSNNYPSEYGIFPGFDDLS----NDIFTPQLPAVDFADENFDGLLLNQDSFLWNF 715 MVK A+++ + S+YKGVRKRKWGK+VSEIRLP+SR RIWLGSYDT EKAARAFDAA FCLRG A FNFP+NPP IS +SL P EIQ AA+FAN+ + E+S SE++ E S S S AT +D +D S LDLL P +G DD S D FT LP D+ E+ LL++ LW+F Sbjct: 1 MVKQAMKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPGSEIRPESPSTSASVATSTVD----YDFSFLDLL--------PMNFGFDSFSDDFSGFSGGDRFTEILPIEDYGGES----LLDESLILWDF 195
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF016 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.667e-33 Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 2 Query: 164 RYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQ 448 +Y GVRKRKWGK+V+EIRLPNSR RIWLGS+D+AEKAARAFDAAL+CLRG A+FNFPDNPP+I GGRSL P +IQ VA++FA E L PEQ Sbjct: 6 KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDNPPEIPGGRSLTPQQIQVVASRFACEEEL--LPPEQ 98
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF12_ARATH (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana GN=ERF012 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.668e-23 Identity = 84/242 (34.71%), Postives = 112/242 (46.28%), Query Frame = 2 Query: 65 IQHHSSKSRIPIT*SPLKMVKHAVE--------KPAEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPD-------ISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFD-------GSLLD---LLTASSSNNYPSEYGIFPGFDDLSNDIFTPQLPAVDFADENFDGLLLNQDSFLWNF 715 IQ S+K +P++ SP + K + +YKGVR R WG +VSEIR PN + RIWLGSY TAE AARA+D AL CL+G A NFP + + L P IQ VAAQ ANS + +P+ S + D D D GS +D L S+S+ Y G+F FD+ + ++PQL + DE F + D LW+F Sbjct: 8 IQTSSTKKEMPLSSSPSSSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFPTSSSSHHLLDNLLDENTLLSPKSIQRVAAQAANS----------------FNHFAPTSSAVSSPSDHDHHHDDGMQSLMGSFVDNHVSLMDSTSSWYDDHNGMFL-FDNGAPFNYSPQLNSTTMLDEYF---YEDADIPLWSF 229
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21 Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 2 Query: 167 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFP-DNPPDISGG--RSLKPSEIQAVAAQFANS 418 Y+GVRKR WGK+VSEIR+P + RIWLGSYD EKAARA+DAALFC+RG +NFP D P + G R L +IQ +A +A+S Sbjct: 27 YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDKKPQLPEGSVRPLSKLDIQTIATNYASS 113
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21 Identity = 68/204 (33.33%), Postives = 105/204 (51.47%), Query Frame = 2 Query: 167 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA-------------NSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASS-SNNYPSEYGIFPGFDDLSNDIFTPQLPAVDFADENF----DGLLLN---QDSFLWNF 715 Y+G R R WGK+VSEIR P ++RIWLG++ TAE AARA D A ++G SA NFP+ + SL +IQA AA+ A +S PL+++ + + + + S S S ++ S + G L D++ S NN + + +D L + P P +D + +F D +LL+ ++SFLWN+ Sbjct: 26 YRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDSTPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSLENNVKYDCAL---YDSLEGLVSMP--PWLDATENDFRYGDDSVLLDPCLKESFLWNY 224
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF13_ARATH (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF013 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 71/177 (40.11%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 59 NSIQHHSSKSRIPIT*SPLKMVKHAVEKPAEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD----NP--PDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYL----SPSISEATVQLDSD--GVFDGSLLDLL 553 +S+ H SS S S ++H + + +YKGVR R WG +V+EIR PN + RIWLGSY TAE AARA+DAAL CL+G A NFP+ +P +I L P IQ VAAQ ANS P + L S S S A+ D D DG L+ L+ Sbjct: 15 SSLSHSSSSSS-----SSTSALRH---QSCKNKIKKYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAANSSSDHFTPPSDENDHDHDDGLDHHPSASSSAASSPPDDDHHNDDDGDLVSLM 183
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF014 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20 Identity = 77/196 (39.29%), Postives = 95/196 (48.47%), Query Frame = 2 Query: 164 RYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA-KFNFPD---------NPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASSSNNYPSEYGIFPGFDDLS--NDIFTPQLPAVDFADENFDGLLLNQDSFLWNF 715 +YKGVR R WG +VSEIR PN + RIWLGSY TAE AARA+DAAL CL+G SA NFP+ N D + S K + A AA AN++P S SVS SP SE + S +D + S + S Y F G D N + P L +D+ F+ D LWNF Sbjct: 34 KYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAANTDPSSS-----SVSTSSPLLSSP--SEDLYDVVSMSQYDQQV-------SLSESSSWYNCFDGDDQFMFINGVSAPYL-TTSLSDDFFE----EGDIRLWNF 210
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20 Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 167 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANS 418 Y GVRKR+WGK+VSEIR P ++RIWLGS+ E AA+A+D A FCL+GR A+ NFP+ D+ + P +IQ AA+ AN+ Sbjct: 45 YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEIEDLPRPSTCTPRDIQVAAAKAANA 128
BLAST of CF836438 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19 Identity = 52/116 (44.83%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 74 HSSKSRIPIT*SPLKMVKHAVEKPAEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNP-PDISGGRSL----KPSEIQAVAAQ 406 + K P+ + M + ++ RYKG+R RKWGK+V+EIR PN R+RIWLGSY TA AARA+D A+F LRG SA+ NFP+ D +GG L P+ I+ AA+ Sbjct: 5 YKRKQEFPMVKEGMVMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAE 120 The following BLAST results are available for this feature:
BLAST of CF836438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836438 ID=CF836438; Name=CF836438; organism=Citrus sinensis; type=EST; length=726bpback to top |