CF836440

Overview
NameCF836440
Unique NameCF836440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1053 contig Csv1_Contig1053:59..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BT3L4_XENTR (Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.023e-37
Identity = 80/157 (50.96%), Postives = 109/157 (69.43%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEE 542
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L S+L ++ VN I  IEEVN+ KDD  VIHF NPKVQ+S++ANT+ ++G  + K++ ++LPGI+ +LG D+L +LRKLAEQF +Q  ++    P   E++DD+VPELV G   EA+  E
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDDVPELV-GNFDEASKNE 156
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BT3L4_XENLA (Transcription factor BTF3 homolog 4 OS=Xenopus laevis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.023e-37
Identity = 80/157 (50.96%), Postives = 109/157 (69.43%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEE 542
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L S+L ++ VN I  IEEVN+ KDD  VIHF NPKVQ+S++ANT+ ++G  + K++ ++LPGI+ +LG D+L +LRKLAEQF +Q  ++    P   E++DD+VPELV G   EA+  E
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDDVPELV-GNFDEASKNE 156
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BT3L4_BOVIN (Transcription factor BTF3 homolog 4 OS=Bos taurus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.996e-36
Identity = 77/158 (48.73%), Postives = 111/158 (70.25%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEK 545
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L S+L ++ VN I  IEEVN+ KDD  VIHF NPKVQ+S++ANT+ ++G  + K + ++LPGI+ +LG D+L +LRKLAEQF +Q  ++ T  P   ++++D+VP+LV  E F+ A++ +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKTPKPEDIDEEEDDVPDLV--ENFDEASKNE 156
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BT3L4_PONAB (Transcription factor BTF3 homolog 4 OS=Pongo abelii GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEK 545
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L S+L ++ VN I  IEEVN+ KDD  VIHF NPKVQ+S++ANT+ ++G  + K + ++LPGI+ +LG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV  E F+ A++ +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV--ENFDEASKNE 156
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BT3L4_MOUSE (Transcription factor BTF3 homolog 4 OS=Mus musculus GN=Btf3l4 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEK 545
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L S+L ++ VN I  IEEVN+ KDD  VIHF NPKVQ+S++ANT+ ++G  + K + ++LPGI+ +LG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV  E F+ A++ +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV--ENFDEASKNE 156
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BT3L4_HUMAN (Transcription factor BTF3 homolog 4 OS=Homo sapiens GN=BTF3L4 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEK 545
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L S+L ++ VN I  IEEVN+ KDD  VIHF NPKVQ+S++ANT+ ++G  + K + ++LPGI+ +LG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV  E F+ A++ +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV--ENFDEASKNE 156
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.908e-36
Identity = 78/158 (49.37%), Postives = 110/158 (69.62%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEK 545
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L S+L ++ VN I  IEEVN+ KDD  VIHF NPKVQ+S++ANT+ ++G  +TK+L ++LPGI+ +LG D+L +LRKLAEQF +Q  +         +++DD+VP+LV  E F+ A++ +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNKAPKAEDIDEEDDDVPDLV--ENFDEASKNE 156
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BTF3_MOUSE (Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 1.690e-35
Identity = 80/158 (50.63%), Postives = 109/158 (68.99%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEK 545
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L  +L ++GVN I  IEEVN+F +   VIHF NPKVQ+S+AANT+ ++G  +TK+L ++LP I+ +LG D+L +LR+LAE   KQ+ + G     T EDDDDEVP+LV  E F+ A++ +
Sbjct:   48 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEVPDLV--ENFDEASKNE 202
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BTF3_HUMAN (Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.690e-35
Identity = 80/158 (50.63%), Postives = 109/158 (68.99%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEK 545
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L  +L ++GVN I  IEEVN+F +   VIHF NPKVQ+S+AANT+ ++G  +TK+L ++LP I+ +LG D+L +LR+LAE   KQ+ + G     T EDDDDEVP+LV  E F+ A++ +
Sbjct:   50 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEVPDLV--ENFDEASKNE 204
[Close]
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: BT3L4_CHICK (Transcription factor BTF3 homolog 4 OS=Gallus gallus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35
Identity = 75/158 (47.47%), Postives = 108/158 (68.35%), Query Frame = 3 
Query:   75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEK 545
            MN EKL K+   V  GG G+ RRKKK VH T T DD +L S+L ++ VN I  IEEVN+ KDD  VIHF NPKVQ+S++ANT+ ++G  + K + ++LPGI+ +LG D+L +LRKLAEQF +Q  ++        +++DD+VP+L   E F+ A++ +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKSEDIDEEDDDVPDL--AENFDEASKNE 156
The following BLAST results are available for this feature:
BLAST of CF836440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BT3L4_XENTR4.023e-3750.96Transcription factor BTF3 homolog 4 OS=Xenopus tro... [more]
BT3L4_XENLA4.023e-3750.96Transcription factor BTF3 homolog 4 OS=Xenopus lae... [more]
BT3L4_BOVIN1.996e-3648.73Transcription factor BTF3 homolog 4 OS=Bos taurus ... [more]
BT3L4_PONAB2.607e-3648.73Transcription factor BTF3 homolog 4 OS=Pongo abeli... [more]
BT3L4_MOUSE2.607e-3648.73Transcription factor BTF3 homolog 4 OS=Mus musculu... [more]
BT3L4_HUMAN2.607e-3648.73Transcription factor BTF3 homolog 4 OS=Homo sapien... [more]
BT3L4_DANRE9.908e-3649.37Transcription factor BTF3 homolog 4 OS=Danio rerio... [more]
BTF3_MOUSE1.690e-3550.63Transcription factor BTF3 OS=Mus musculus GN=Btf3 ... [more]
BTF3_HUMAN1.690e-3550.63Transcription factor BTF3 OS=Homo sapiens GN=BTF3 ... [more]
BT3L4_CHICK6.422e-3547.47Transcription factor BTF3 homolog 4 OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02P14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02P14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836440 ID=CF836440; Name=CF836440; organism=Citrus sinensis; type=EST; length=701bp
AGAGAACACCTTTAGGGCTCTTATCTTCTTCTTCACCAAATTCTTTGTCC
CCTCACAAAAACCCTAGCTCCAAGATGAATGTGGAGAAGCTAATGAAGAT
GGCCGGTGCAGTTCTCACCGGTGGTAATGGTAGTGTGAGAAGAAAGAAGA
AGGCTGTTCATAATACAACAACCACCGATGACCATAGGCTTCATAGCACC
TTGAATAGAATAGGAGTGAATGCTATTCCTGCAATTGAGGAAGTTAACAT
TTTCAAGGATGACGTCGTTATTCACTTCTTAAATCCCAAAGTACAATCTT
CGATTGCTGCCAACACATGGGTAGTTAGTGGTGCCCCACAAACCAAGAAG
TTGCAGGATATTCTCCCTGGAATTATCGGTCGGTTGGGGCCAGATAATTT
GGACAACCTGAGGAAGTTGGCGGAGCAGTTTCAGAAGCAAGCACCTAATG
CAGGAACTGGTGCACCCACGACTCAAGAGGACGACGACGATGAGGTCCCA
GAGCTTGTGGCAGGCGAGACGTTTGAAGCTGCCGCAGAGGAGAAAACATA
TAAACCTGACGCTGCTTCTTAGAGAGTTTTATCTAGAGGGACTTTGTGTT
ATTCTATATATTTTCTATGTTTTTTGAGTTTTTATTTTACTTTTCCGAGT
CAACTTTCTCTTGTTCTATCTGATTCTCCCTGTGACACTAGATATTGTTA
C
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