CF836448

Overview
NameCF836448
Unique NameCF836448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SAPK1_ORYSJ (Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.162e-64
Identity = 119/181 (65.75%), Postives = 147/181 (81.22%), Query Frame = -3
Query:  266 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPTQSVEEIMRIIQEAKMPGEATKVAGQG---AAGASDPDDMEGDIEFEIDASGDYM 799
            TVGTPAYIAPEVL+RKEYDGK +DVWSCGVTLYVMLVGAYPFEDP+DPRNFRKTI RI +VQY +PDYVRVSADCRHLLS+IFV +P +RI IPEIK HPWFLKNLP E+ +  + + + A  + P+QS+EE+M IIQEA+ PG+A K+AG G     G+ D DD++   + +I+ SGD++
Sbjct:  159 TVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCRHLLSRIFVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQEARKPGDAMKLAGAGQVACLGSMDLDDIDDIDDIDIENSGDFV 339          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SAPK3_ORYSJ (Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. japonica GN=SAPK3 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.817e-64
Identity = 118/145 (81.38%), Postives = 128/145 (88.28%), Query Frame = -3
Query:  365 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPTQSVEEIMRIIQEAKMPGE 799
            TVGTPAYIAPEVL+RKEYDGK +DVWSCGVTLYVMLVG+YPFEDP DPRNFRKTI RI  VQY +PDYVRVS+DCR LLSQIFVADPSKRI IPEIKKH WFLKNLPKEI E EK +YK+     PTQ+VEEIMRIIQEAK+PG+
Sbjct:  160 TVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGSYPFEDPGDPRNFRKTISRILGVQYSIPDYVRVSSDCRRLLSQIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKADYKDTDAAPPTQAVEEIMRIIQEAKVPGD 304          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SAPK3_ORYSI (Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. indica GN=SAPK3 PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 4.817e-64
Identity = 118/145 (81.38%), Postives = 128/145 (88.28%), Query Frame = -3
Query:  365 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPTQSVEEIMRIIQEAKMPGE 799
            TVGTPAYIAPEVL+RKEYDGK +DVWSCGVTLYVMLVG+YPFEDP DPRNFRKTI RI  VQY +PDYVRVS+DCR LLSQIFVADPSKRI IPEIKKH WFLKNLPKEI E EK +YK+     PTQ+VEEIMRIIQEAK+PG+
Sbjct:  160 TVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGSYPFEDPGDPRNFRKTISRILGVQYSIPDYVRVSSDCRRLLSQIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKADYKDTDAAPPTQAVEEIMRIIQEAKVPGD 304          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSJ (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. japonica GN=SAPK2 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.817e-61
Identity = 114/179 (63.69%), Postives = 145/179 (81.01%), Query Frame = -3
Query:  266 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPTQSVEEIMRIIQEAKMPGEATKVAGQ-GAAGASDPDDMEGDIEFEIDASGDYM 799
            TVGTPAYIAPEVLARKEYDGK +DVWSCGVTLYVMLVGAYPFEDP++PRNFRKTI RI +VQY +PDYVRVS +CRHLLS+IFVA+P +RI IPEIK HPWFLKNLP E+ +  + + +    + P+Q +EEIM IIQEA+ PG+ +K +GQ    G+ + DD++ D + +++ SGD++
Sbjct:  159 TVGTPAYIAPEVLARKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYMVPDYVRVSMECRHLLSRIFVANPEQRITIPEIKNHPWFLKNLPIEMTDEYQMSVQMNDINTPSQGLEEIMAIIQEARKPGDGSKFSGQIPGLGSMELDDVDTD-DIDVEDSGDFV 336          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSI (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.817e-61
Identity = 114/179 (63.69%), Postives = 145/179 (81.01%), Query Frame = -3
Query:  266 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPTQSVEEIMRIIQEAKMPGEATKVAGQ-GAAGASDPDDMEGDIEFEIDASGDYM 799
            TVGTPAYIAPEVLARKEYDGK +DVWSCGVTLYVMLVGAYPFEDP++PRNFRKTI RI +VQY +PDYVRVS +CRHLLS+IFVA+P +RI IPEIK HPWFLKNLP E+ +  + + +    + P+Q +EEIM IIQEA+ PG+ +K +GQ    G+ + DD++ D + +++ SGD++
Sbjct:  159 TVGTPAYIAPEVLARKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYMVPDYVRVSMECRHLLSRIFVANPEQRITIPEIKNHPWFLKNLPIEMTDEYQMSVQMNDINTPSQGLEEIMAIIQEARKPGDGSKFSGQIPGLGSMELDDIDTD-DIDVEDSGDFV 336          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: AAIP_WHEAT (Abscisic acid-inducible protein kinase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.198e-60
Identity = 116/181 (64.09%), Postives = 146/181 (80.66%), Query Frame = -3
Query:  266 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPTQSVEEIMRIIQEAKMPGE-ATKVAGQGAA-GASDPDDMEGDI-EFEIDASGDYM 799
            TVGTPAYIAPEVL+R+EYDGK +DVWSCGVTLYVMLVGAYPFEDP++PRNFRKTI RI +VQY +PDYVRVS DC HLLS+IFV +P +RI IPEIK HPWFLK LP E+ +  + + + A  + P+QS+EE M IIQEA+ PG+ A  VAGQ A  G+ D DD++ DI + ++++SGD++
Sbjct:  149 TVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYSVPDYVRVSMDCIHLLSRIFVGNPQQRITIPEIKNHPWFLKRLPVEMTDEYQRSMQLADMNTPSQSLEEAMAIIQEAQKPGDNALGVAGQVACLGSMDLDDIDFDIDDIDVESSGDFV 329          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SRK2E_ARATH (Serine/threonine-protein kinase SRK2E OS=Arabidopsis thaliana GN=SRK2E PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.958e-59
Identity = 113/182 (62.09%), Postives = 137/182 (75.27%), Query Frame = -3
Query:  272 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPTQSVEEIMRIIQEAKMPGEATKVAGQGAAGASD-PDDMEGDIE-----FEIDASGD 799
            TVGTPAYIAPEVL +KEYDGK +DVWSCGVTLYVMLVGAYPFEDPE+P+NFRKTI RI NVQY +PDYV +S +CRHL+S+IFVADP+KRI IPEI+ H WFLKNLP +++       +    DQP QS+EEIM+II EA +P   T+       G+ D  DDME D+E      +ID+SG+
Sbjct:  176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIAEATVPPAGTQNLNHYLTGSLDIDDDMEEDLESDLDDLDIDSSGE 357          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SRK2G_ARATH (Serine/threonine-protein kinase SRK2G OS=Arabidopsis thaliana GN=SRK2G PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.560e-57
Identity = 105/182 (57.69%), Postives = 134/182 (73.63%), Query Frame = -3
Query:  260 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPTQSVEEIMRIIQEAKMPGEATKVAGQGAAGA--SDPDDMEGDIEFEIDASGDYMSH 799
            TVGTPAYIAPEVL+R+EYDGK +DVWSCGVTLYVMLVGAYPFEDP DP+NFRKTI RI  VQY +PDYV +S +C+HLLS+IFV + +KRI + EIK HPW+LKNLPKE++E  +  Y +       QSVE+IM+I+ EA+ P  +T       +GA   + +D+E ++E E D   +Y  H
Sbjct:  159 TVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGAYPFEDPNDPKNFRKTIQRIMAVQYKIPDYVHISQECKHLLSRIFVTNSAKRITLKEIKNHPWYLKNLPKELLESAQAAYYKRDTSFSLQSVEDIMKIVGEARNPAPSTSAVKSSGSGADEEEEEDVEAEVEEEEDDEDEYEKH 340          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SAPK7_ORYSJ (Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica GN=SAPK7 PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.271e-56
Identity = 112/185 (60.54%), Postives = 139/185 (75.14%), Query Frame = -3
Query:  269 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNYKEAGRDQPT---QSVEEIMRIIQEAKM-PGEATKVAGQGAAGASDPDD----MEGDIEFEIDASGDY 799
            TVGTPAYIAPEVL+R+EYDGK++DVWSCGVTLYVMLVGAYPFEDP+DP+NFRKTI RI ++QY +P+YV VS DCR LLS+IFVA+P+KRI I EI+ HPWFLKNLP+E+ E  +  Y +     PT   QSVEEIM+I++EA+  P  +T VAG G     + +D     E + E E DA  +Y
Sbjct:  159 TVGTPAYIAPEVLSRREYDGKTADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIMSIQYKIPEYVHVSQDCRQLLSRIFVANPAKRITIREIRNHPWFLKNLPRELTEAAQAMYYKKDNSAPTYSVQSVEEIMKIVEEARTPPRSSTPVAGFGWQEEDEQEDNSKKPEEEQEEEEDAEDEY 343          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SAPK6_ORYSJ (Serine/threonine-protein kinase SAPK6 OS=Oryza sativa subsp. japonica GN=SAPK6 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.659e-56
Identity = 111/186 (59.68%), Postives = 137/186 (73.66%), Query Frame = -3
Query:  272 TVGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPKEIIEIEKTNY---KEAGRDQPTQSVEEIMRIIQEAKM-PGEATKVAGQG------AAGASDPDDMEGDIEFEIDASGD 799
            TVGTPAYIAPEVL+R+EYDGK +DVWSCGVTLYVMLVGAYPFEDP+DP+NFRKTI RI ++QY +P+YV +S DCR LLS+IFVA+P+KRI I EI+ HPWF+KNLP+E+ E  +  Y     + R    Q+V+EIM+I+QEAK  P  +T VAG G           +PDD EGD + E    GD
Sbjct:  159 TVGTPAYIAPEVLSRREYDGKMADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIVSIQYKIPEYVHISQDCRQLLSRIFVANPAKRITIREIRNHPWFMKNLPRELTEAAQAKYYKKDNSARTFSDQTVDEIMKIVQEAKTPPPSSTPVAGFGWTEEEEQEDGKNPDDDEGDRDEEEGEEGD 344          
The following BLAST results are available for this feature:
BLAST of CF836448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
SAPK1_ORYSJ2.162e-6465.75Serine/threonine-protein kinase SAPK1 OS=Oryza sat... [more]
SAPK3_ORYSJ4.817e-6481.38Serine/threonine-protein kinase SAPK3 OS=Oryza sat... [more]
SAPK3_ORYSI4.817e-6481.38Serine/threonine-protein kinase SAPK3 OS=Oryza sat... [more]
SAPK2_ORYSJ3.817e-6163.69Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
SAPK2_ORYSI3.817e-6163.69Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
AAIP_WHEAT7.198e-6064.09Abscisic acid-inducible protein kinase (Fragment) ... [more]
SRK2E_ARATH7.958e-5962.09Serine/threonine-protein kinase SRK2E OS=Arabidops... [more]
SRK2G_ARATH2.560e-5757.69Serine/threonine-protein kinase SRK2G OS=Arabidops... [more]
SAPK7_ORYSJ1.271e-5660.54Serine/threonine-protein kinase SAPK7 OS=Oryza sat... [more]
SAPK6_ORYSJ1.659e-5659.68Serine/threonine-protein kinase SAPK6 OS=Oryza sat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02P19_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836448 ID=CF836448; Name=CF836448; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTTTTTTTTTTTTAAAATCCAAGTCCAATAATTGGACAATAAAAAA
GTGTCAAATATACAGTCAACAGATTCTTGTTCCTCGGTTGGCACTTGGAA
CCACCAACTGTTTCTGTGGTGATCCAGGTAAATACCATCCAATACGAAAT
TACTTTACATATTATAATAAGTGCCTTATTAACCTTCAATGACAGGAACA
GCTAAAAGCTTGAAAAACAAGCTCTCTCCATGTGATTTCTATTGCCATAC
TCACGGATCATGGCTCATATAATCACCGCTGGCATCAATCTCAAATTCTA
TGTCACCCTCCATGTCATCAGGGTCCGATGCCCCAGCAGCACCTTGCCCG
GCAACTTTCGTTGCTTCACCCGGCATCTTTGCCTCTTGTATGATACGCAT
TATTTCTTCAACACTCTGAGTTGGTTGGTCACGTCCTGCTTCCTTGTAAT
TTGTTTTCTCTATTTCAATTATCTCTTTCGGCAAATTCTTCAGGAACCAA
GGATGCTTTTTGATCTCTGGAATGGGGATCCTCTTTGAGGGATCAGCAAC
AAAAATCTGAGAAAGCAGATGCCTGCAATCCGCAGATACGCGTACATAGT
CGGGCAAGAAGTACTGAACATTCCTTATTCTATCAATTGTCTTGCGGAAG
TTTCTTGGATCTTCAGGATCCTCAAATGGATATGCACCCACCAACATCAC
ATACAGTGTCACTCCACAGGACCAAACATCTGAACTCTTGCCATCATATT
CCTTTCTTGCTAGGACCTCAGGGGCAATGTATGCTGGAGTACCAACTGTT
G
back to top