CF836500

Overview
NameCF836500
Unique NameCF836500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig659 contig Csv1_Contig659:118..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 2.133e-102
Identity = 176/249 (70.68%), Postives = 204/249 (81.93%), Query Frame = 3
Query:   81 KGASFLVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNL 827
            +G+  LV  L I I F   +      ++Q++ D+V KLPGQNFNV+FAHYSG+V  NE+ GRALFYW  EAVED  SKPLVLWLNGGPGCSS+AYGEAEEIGPFHIK DGKTLYLN YSWNQ ANILFLD+PVGVG+SYSNTSSD+ +NGDKRTAEDSLKFLLKW+ERF ++KGRDFYI GESY GHY+PQLS+AI++HNQ + + +INLKGYMVGN L DD+HD LGLFQ+ WS G ISD TY  L L
Sbjct:    5 RGSCCLVNAL-IAIAFLATAHLCEAGLSQKEQDKVSKLPGQNFNVSFAHYSGFVATNEQLGRALFYWLFEAVEDAKSKPLVLWLNGGPGCSSVAYGEAEEIGPFHIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIPQLSEAIVKHNQGSDKNSINLKGYMVGNGLMDDFHDRLGLFQYIWSLGFISDQTYSLLQL 252          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.253e-94
Identity = 154/215 (71.63%), Postives = 189/215 (87.91%), Query Frame = 3
Query:  183 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNL 827
            V ++PGQ F+ +FAHY+GYVTV+E+ G ALFYWF EA  DP SKPL+LWLNGGPGCSSIA+G  EE+GPFH+  DGK +++NPYSWNQVANILFLDSPVGVG+SYSNTS+DI +NGD+RTA+DSL FL KWLERF Q+K R+FY++GESY GHYVPQL++AI RH++ATG+K+INLKGYMVGNALTDD+HD+ G+FQ+ W+ GLISD TYK LN+
Sbjct:    1 VPRVPGQAFDASFAHYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVNADGKGVHMNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLAQAIKRHHEATGDKSINLKGYMVGNALTDDFHDHYGIFQYMWTTGLISDQTYKLLNI 215          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 9.619e-87
Identity = 155/246 (63.01%), Postives = 188/246 (76.42%), Query Frame = 3
Query:   90 SFLVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEA--VEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQL 821
            SFL+ IL + I     +A S+  V +Q  DR+  LPGQ  NV+F  YSGYVTV+EE GRALFYW VE+    DP S+PLVLWLNGGPGCSS+AYG AEEIGPF +  DGKTL+   Y+WN++AN+LFL+SP GVGFSYSNT+SD+ T GD+RTAEDS  FL+ W ERF Q+K R+FYI GESY GH+VPQLSK +   N+     AINLKG+MVGNA+TDDYHDY+G F++WW+ GLISD TY QL
Sbjct:    4 SFLLIILLLTISTSCCAAPSSY-VEEQLRDRISNLPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRVGSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQLSKLVHERNKGFKNPAINLKGFMVGNAVTDDYHDYIGTFEYWWNHGLISDSTYHQL 248          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.799e-86
Identity = 147/246 (59.76%), Postives = 191/246 (77.64%), Query Frame = 3
Query:   96 LVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAV--EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNL 827
            + ++L +   F +   +++    +Q+ DR+  LPG+  +V+F+H+SGY+TVNE +GRALFYW  E+   E+P+SKPLVLWLNGGPGCSS+AYG AEEIGPF I PDGKTLY NPYSWN++AN+LFL+SP GVGFSYSNT+SD+ T GD+RTAED+  FL+KW ERF Q+K R+FYI+GESY GHYVPQLS+ +          AIN KG++VGNA+ DDYHDY+GLF++WW+ GLISD TY  L +
Sbjct:    1 MARLLLLFFFFLILLHYASCSRHEQEKDRIFHLPGEPNDVSFSHFSGYITVNESAGRALFYWLTESPPSENPESKPLVLWLNGGPGCSSVAYGAAEEIGPFRINPDGKTLYHNPYSWNKLANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKWFERFPQYKHREFYIAGESYAGHYVPQLSQIVYEKR----NPAINFKGFIVGNAVIDDYHDYVGLFEYWWAHGLISDLTYHNLRI 242          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 2.076e-81
Identity = 137/237 (57.81%), Postives = 179/237 (75.53%), Query Frame = 3
Query:  114 ICIIFYLGSAFSTDPVAQQKL-DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQL 821
            +C++  L    S+D   +QK+ D++  LPGQ  N+NF+ +SGYVTV+  +GRALFYW  EA     +KPLVLWLNGGPGCSSIAYG +EE+GPF + PDGKTL LN Y+WN+VAN+LFLDSP GVGFSY+NTSSD  T GDKRT ED+ +FL++WLERF ++K R FYI+GESY GHY+P+L++ I+  N+      INLKG ++GN L DDY+D  G+  +WW+ GLISD++Y  L
Sbjct:   14 LCMVIALLDVVSSDDAKEQKMKDKIISLPGQPPNLNFSQFSGYVTVDPAAGRALFYWLTEAPRPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPELAQLIVNRNKGAKNPTINLKGILMGNPLVDDYNDNKGMRDYWWNHGLISDESYNDL 250          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 1.066e-77
Identity = 136/215 (63.26%), Postives = 165/215 (76.74%), Query Frame = 3
Query:  177 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQL 821
            DR+ +LPGQ   V+F  YSGY+TV+E +GR+LFY   EA ED    PLVLWLNGGPGCSS+AYG +EE+G F +KP G  L LN Y WN+VAN+LFLDSP GVGFSY+NTSSDI T+GD RTA DS  FL KW ERF  +K RDFYI+GESY GHYVP+LS+ + R    +    INLKG+MVGN L DDYHDY+G F+FWW+ G++SDDTY++L
Sbjct:    9 DRIARLPGQPA-VDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHR----SKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRL 218          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.626e-76
Identity = 134/240 (55.83%), Postives = 179/240 (74.58%), Query Frame = 3
Query:  108 LFICIIFYLGSAF-STDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVE-DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQL 821
            +F+ ++  L + F S+    +Q+ DR+  LPGQ   V F+ YSGYV VN+  GRALFYW  E+    P +KPL+LWLNGGPGCSSIAYG +EEIGPF I   G  LYLN ++WN+ AN+LFL+SP GVG+SY+NTSSD+  +GD+RTA+D+L FL+KWL RF Q+K RDFYI+GESY GHYVPQL+K I  +N+A  +  INLKG++VGNA+TD+ +D +G   +WW+  +ISD +YK +
Sbjct:    7 IFLLLVALLSTTFPSSSSSREQEKDRIKALPGQP-KVAFSQYSGYVNVNQSHGRALFYWLTESSSPSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRINKTGSNLYLNKFAWNKDANLLFLESPAGVGYSYTNTSSDLKDSGDERTAQDNLIFLIKWLSRFPQYKYRDFYIAGESYAGHYVPQLAKKINDYNKAFSKPIINLKGFLVGNAVTDNQYDSIGTVTYWWTHAIISDKSYKSI 245          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 3.429e-76
Identity = 132/215 (61.40%), Postives = 164/215 (76.28%), Query Frame = 3
Query:  177 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQL 821
            DR+ +LPGQ   V+F  YSGY+TV+E +GR+LFY   EA E+    PLVLWLNGGPGCSS+AYG +EE+G F + P G  L LN Y WN+VAN+LFLDSP GVGFSY+NTSSDI T+GD RTA DS  FL  W ERF  +K R+FY++GESY GHYVP+LS+ + R    +G   INLKG+MVGN L DDYHDY+G F+FWW+ G++SDDTY++L
Sbjct:   41 DRIVRLPGQP-EVDFDMYSGYITVDEAAGRSLFYLLQEAPEEAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVMPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFYVAGESYAGHYVPELSQLVHR----SGNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRL 250          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 7.150e-74
Identity = 127/219 (57.99%), Postives = 169/219 (77.17%), Query Frame = 3
Query:  165 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQL 821
            + + DR+  LPGQ  NV F  +SGYVTV++ SGR+LFYW  EA + P SKPLV+WLNGGPGCSS+AYG +EEIGPF I   G  LYLN ++WN ++N+LFL++P GVGFSY+N SSD+   GD+RTA+DSL+FL++WL RF ++  R+ YI+GESY GHYVPQL+K I+ +N+ + +  +NLKG MVGNA+TD+++D LG   +WWS  +ISD TY QL
Sbjct:   32 EAEADRITSLPGQP-NVTFEQFSGYVTVDKLSGRSLFYWLTEASDLPLSKPLVIWLNGGPGCSSVAYGASEEIGPFRISKGGSGLYLNKFAWNSISNLLFLEAPAGVGFSYTNRSSDLFNTGDRRTAKDSLQFLIQWLHRFPRYNHREIYITGESYAGHYVPQLAKEIMNYNKRS-KNPLNLKGIMVGNAVTDNHYDNLGTVSYWWSHAMISDRTYHQL 248          
BLAST of CF836500 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.761e-72
Identity = 133/240 (55.42%), Postives = 170/240 (70.83%), Query Frame = 3
Query:  105 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVE-DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQL 821
            +LF+  +  L  A S+    +Q+ DR+  LPGQ   V F+ +SGYVTVNE  GR+LFYW  E+    P +KPL+LWLNGGPGCSSIAYG +EEIGPF I   G  LYLN +SWN  AN+LFL+SPVGVGFSY+NTSSD   +GD+RTA+++L FL+ W+ RF Q++ RDFYI GESY GHYVPQL++ I  +N A     INLKG+MVGN   D  +D LG   +WWS  +ISD +Y ++
Sbjct:    6 LLFLLFVL-LSLATSSTSTKEQEEDRIKALPGQP-KVGFSQFSGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCNLYLNNFSWNTEANLLFLESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQLAQKIHEYNNAYKNPVINLKGFMVGNPEMDKNNDRLGTITYWWSHAMISDASYNRI 243          
The following BLAST results are available for this feature:
BLAST of CF836500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
SCP29_ARATH2.133e-10270.68Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP22_HORVU1.253e-9471.63Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP27_ARATH9.619e-8763.01Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP26_ARATH2.799e-8659.76Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP28_ARATH2.076e-8157.81Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
CBP2_WHEAT1.066e-7763.26Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP24_ARATH2.626e-7655.83Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
CBP2_HORVU3.429e-7661.40Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP25_ARATH7.150e-7457.99Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP22_ARATH1.761e-7255.42Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_03B04_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836500 ID=CF836500; Name=CF836500; organism=Citrus sinensis; type=EST; length=830bp
CGTTTTTGCTTGATTATGTCTTCTTTATAAGTCGCAGTACCCCAGTACAC
TAAACCATATAAAAAATGGCTTATAATCCAAAAGGGGCTTCCTTTCTTGT
TCAAATCTTGTTCATTTGCATAATTTTTTATCTGGGCAGTGCCTTTTCAA
CAGACCCAGTTGCCCAGCAAAAACTTGACAGAGTTGGGAAGCTACCTGGG
CAAAATTTCAATGTCAACTTTGCCCATTACTCTGGTTATGTCACAGTCAA
CGAAGAATCCGGGAGGGCTCTCTTTTATTGGTTCGTTGAAGCTGTTGAAG
ATCCTGATTCCAAGCCTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGT
TCATCCATTGCTTATGGAGAGGCAGAGGAAATAGGTCCTTTTCACATCAA
GCCAGATGGGAAGACCTTATACTTGAATCCTTACTCTTGGAATCAAGTTG
CCAACATTCTGTTTCTTGATTCCCCCGTTGGTGTTGGTTTTTCATATTCA
AATACATCCTCTGATATTACGACCAATGGCGATAAAAGGACTGCGGAGGA
TTCCCTAAAATTTTTACTAAAGTGGTTAGAACGGTTTTCACAATTTAAAG
GAAGGGATTTCTACATCTCCGGGGAGAGTTATGGAGGGCATTATGTTCCT
CAGTTAAGCAAAGCAATCATAAGGCACAACCAAGCAACTGGGGAAAAAGC
AATTAATCTGAAGGGCTACATGGTGGGAAATGCTCTAACTGATGATTACC
ACGATTACTTGGGCCTTTTTCAGTTTTGGTGGTCAGCTGGTTTGATATCT
GATGATACGTACAAGCAACTAAACCTTCTA
back to top