CF836541

Overview
NameCF836541
Unique NameCF836541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1182 contig Csv1_Contig1182:1..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836541 vs. ExPASy Swiss-Prot
Match: KYNB_BACCR (Kynurenine formamidase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=kynB PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.216e-12
Identity = 52/142 (36.62%), Postives = 82/142 (57.75%), Query Frame = -2
Query:  392 LDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 814
            LD+ V  GP  ++DV   +++  + LES ++ +GV R+L RT +  +    ++F        AD A +L E   I+L+GVD  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR ++
Sbjct:   71 LDVQVYVGPARIIDVSNLESIGKKELESFHL-EGVERLLLRTSSHGKA---EEFPEVIPHLRADIASFLSEK-GIRLIGVDVPSVDPLDDKELAAHHQLFKHGIHI-LENVVLDHVADGDYELIALPLALTDADGSPVRAVI 206          
BLAST of CF836541 vs. ExPASy Swiss-Prot
Match: KYNB_BACC1 (Kynurenine formamidase OS=Bacillus cereus (strain ATCC 10987) GN=kynB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = -2
Query:  392 LDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 814
            LD+ V  GP  ++DV   +++  + LE+ N+ +GV R+L RT +  +     +F        AD A +L E   I+L+GVD  SV   DD  + AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR ++
Sbjct:   71 LDIQVYVGPVRIIDVSNLESIGKKELENFNL-EGVERLLLRTSSHGK---VNEFPDVIPHLHADIAPFLSEK-GIRLIGVDVPSVDPLDDKELEAHHQLFKHGIHI-LENVVLDHVADGDYELIALPLALTDADGSPVRAVI 206          
BLAST of CF836541 vs. ExPASy Swiss-Prot
Match: KYNB_BACWK (Kynurenine formamidase OS=Bacillus weihenstephanensis (strain KBAB4) GN=kynB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = -2
Query:  392 LDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 814
            LD+ V  GP  ++DV   +++  + LE+ ++ +GV R+L RT +  +     +F        AD A +L E   I+L+GVD  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR ++
Sbjct:   71 LDIQVYVGPARIIDVSNLESIGKKELENFHL-EGVERLLLRTSSHGKA---NEFPDVIPHLRADIAAFLSEK-GIRLIGVDVPSVDPLDDKELAAHHQLFKHGIHI-LENVVLDHVVDGDYELIALPLALTDADGSPVRAVI 206          
BLAST of CF836541 vs. ExPASy Swiss-Prot
Match: KYNB_BACCZ (Kynurenine formamidase OS=Bacillus cereus (strain ZK / E33L) GN=kynB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = -2
Query:  392 LDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 814
            LD+ V  GP  ++DV   +++  + LE+ ++ +GV R+L RT +  +     +F        AD A +L E   I+L+GVD  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR ++
Sbjct:   71 LDVQVYVGPARIIDVSNLESIGKKELENFHL-EGVERLLLRTSSHGKA---NEFPDVIPHLRADIAPFLSEK-GIRLIGVDVPSVDPLDDKELAAHHQLFKHGIHI-LENVVLDHVADGDYELIALPLALSDADGSPVRAVI 206          
BLAST of CF836541 vs. ExPASy Swiss-Prot
Match: KYNB_BACAN (Kynurenine formamidase OS=Bacillus anthracis GN=kynB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = -2
Query:  392 LDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 814
            LD+ V  GP  ++DV   +++  + LE  ++ +GV R+L RT +  +     +F        AD A +L E   I+L+GVD  SV   DD  ++AHH+L ++  I  +E + LDHV  G Y +  LPL +  A+GSPVR ++
Sbjct:   71 LDIQVYVGPTRIIDVSNLESIGKKELEKFHL-EGVERLLLRTSSHGKA---NEFPDIIPHLRADIAPFLSEK-GIRLIGVDVPSVDPLDDKELAAHHQLFKH-SIHILENVVLDHVADGDYELIALPLALSDADGSPVRAVI 206          
BLAST of CF836541 vs. ExPASy Swiss-Prot
Match: KYNB_BACAH (Kynurenine formamidase OS=Bacillus thuringiensis (strain Al Hakam) GN=kynB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11
Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = -2
Query:  392 LDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 814
            LD+ V  GP  ++DV   +++  + LE  ++ +GV R+L RT +  +     +F        AD A +L E   I+L+GVD  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR ++
Sbjct:   71 LDVQVYVGPARIIDVSNLESIGKKELEKFHL-EGVERLLLRTSSHGKA---NEFPDIIPHLRADIAPFLSEK-GIRLIGVDVPSVDPLDDKELAAHHQLFKHGIHI-LENVVLDHVADGDYELIALPLALSDADGSPVRAVI 206          
BLAST of CF836541 vs. ExPASy Swiss-Prot
Match: KYNB_BACHK (Kynurenine formamidase OS=Bacillus thuringiensis subsp. konkukian GN=kynB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.344e-11
Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = -2
Query:  392 LDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 814
            LD+ V  GP  ++DV   +++  + LE  ++ +GV R+L RT +  +     +F        AD A +L E   I+L+GVD  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR ++
Sbjct:   71 LDIQVYVGPTRIIDVSNLESIGKKELEKFHL-EGVERLLLRTSSHGKA---NEFPDIIPHLRADIAPFLSEK-GIRLIGVDVPSVDPLDDKELAAHHQLFKHGIHI-LENVVLDHVADGDYELIALPLALSDADGSPVRAVI 206          
BLAST of CF836541 vs. ExPASy Swiss-Prot
Match: KYNB_BACCN (Kynurenine formamidase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=kynB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.994e-11
Identity = 47/142 (33.10%), Postives = 75/142 (52.82%), Query Frame = -2
Query:  392 LDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 814
            LD+ V  GP  ++DV    ++  + L+  N+ +GV R+L RT +      F       + F+       +    ++L+GVD  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR I+
Sbjct:   71 LDIHVYVGPARIIDVSSMDSIGVKELQQFNL-EGVERLLLRTSSHGNAQKFPDI----IPFLCAEIAPFLSKKGVRLIGVDVPSVDPLDDKELAAHHQLFQHGIHI-LENVVLDHVQDGDYELIALPLALTEADGSPVRAII 206          
The following BLAST results are available for this feature:
BLAST of CF836541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
KYNB_BACCR1.216e-1236.62Kynurenine formamidase OS=Bacillus cereus (strain ... [more]
KYNB_BACC13.537e-1236.62Kynurenine formamidase OS=Bacillus cereus (strain ... [more]
KYNB_BACWK4.619e-1235.92Kynurenine formamidase OS=Bacillus weihenstephanen... [more]
KYNB_BACCZ7.879e-1235.92Kynurenine formamidase OS=Bacillus cereus (strain ... [more]
KYNB_BACAN7.879e-1235.92Kynurenine formamidase OS=Bacillus anthracis GN=ky... [more]
KYNB_BACAH1.029e-1135.92Kynurenine formamidase OS=Bacillus thuringiensis (... [more]
KYNB_BACHK1.344e-1135.92Kynurenine formamidase OS=Bacillus thuringiensis s... [more]
KYNB_BACCN2.994e-1133.10Kynurenine formamidase OS=Bacillus cereus subsp. c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_03C04_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836541 ID=CF836541; Name=CF836541; organism=Citrus sinensis; type=EST; length=836bp
GCCCCTCAGTTTTTTTTTTTTTTTTAACAAAAGACTCTTATTTTTAGAAA
TGTATCCATCCTCAAAAATACAAAAAGACACTTATTTTTAGAAATATCCT
TATCTGATACTCATACTACCACCTTAATATCAAATAAGGCCTAAAACAGG
TTTACAAATGCTACATCAAAGTACAGCAATCCAATTTCCCAATGTCTCCA
AGCTTACCGCAACAAGAAAATTAAACCTTATGTGAAAAAAAAAAAAAAAG
CATAATGTCTTATCCATAACGAAGCTATGCATAAGCACACTGCAATATCT
CTTCTGATGCATATAATAAGTATATGGTCTTGACTTTACTTATCATTATC
TCATTCATTGTTTCATGGGAAAACTGATGTTCTCATTTGATGAGGATGCA
TCTTACTGGTGATCCCTCAGCACCAACCATTCTTAGAGGCAAGCAATGGA
TTGAATATAATCCTGCTGGGACATGGTCAAGTTTAAGGCCTTCAACTGGG
ATGATTTCCCTGTTTCTTAGAAGTTCATGATGAGCTGAAATAATGTCATC
AAAGGCAGCAACAGACAAGTAATCAACTCCAACAAGTTTGATATCAGTGT
TTTCAACCAACCATTTTGCCCCATCTGCCATAAATCCCACATAGCTTGTG
TCAAACTTTTTGAACATAAGCTGCCTGTCTGTGTTTAGCGTTCTGAAAAG
TACACGGCGTACCCCCTTGGGAATATTCAAGGACTCCAAGACCTCAGCAG
TTAAGTTCTTATCTCGTGGAACATCAACTAATAGTCCAGGACCGTTTAAG
ACATCCAAGTCAAGAGAATCAGCATCAAAGCCAGCA
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