CF836547

Overview
NameCF836547
Unique NameCF836547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig589 contig Csv1_Contig589:231..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF836547 vs. ExPASy Swiss-Prot
Match: PHS_MICAN (Putative pterin-4-alpha-carbinolamine dehydratase OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_39970 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.190e-13
Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 1 
Query:   94 LAEQDCSPASPFQTPMSADDAKKLLKKVVGWRLLEEGGL-KLQCLWKLRDFKCGVELINRIYKVTEAAGHFPNLHLEQPNQVRAELWTSSIGGLSMNDFIVAAKLDQI 414
            LA+Q C P     +P++A++   L  K+  W LLE  G+ +LQ L+K  +F+  +   N + +  E  GH P L L +  +V    WT  +GGL  NDFI+AA+ D I
Sbjct:    4 LAQQKCQPYQSGSSPITAEEITALQAKIPDWNLLEYEGIPRLQKLYKFANFQGAIAFTNAVGEAAEKEGHHPAL-LTEWGKVTVSWWTHDVGGLHQNDFIMAARTDDI 110
[Close]
BLAST of CF836547 vs. ExPASy Swiss-Prot
Match: PHS1_GLOVI (Putative pterin-4-alpha-carbinolamine dehydratase 1 OS=Gloeobacter violaceus GN=gll0926 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11
Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:   88 LSLAEQDCSPASPFQTPMSADDAKKLLKKVVGWRLLE-EGGLKLQCLWKLRDFKCGVELINRIYKVTEAAGHFPNLHLEQPNQVRAELWTSSIGGLSMNDFIVAAKLDQI 414
            ++L EQ C+   P    + A +  +L  ++  WR++E EG  +L+  ++LRDF+  +    R+ +  EA GH P L L +   V+   WT +I GL  NDF++AAK D I
Sbjct:    1 MNLTEQRCTACRPDAPRVGAAEIAELHPQIPAWRIVEIEGTPRLERQFRLRDFREAIAFTVRVGEEAEAEGHHPAL-LTEWGSVKVSWWTHAIAGLHRNDFVMAAKTDAI 109
The following BLAST results are available for this feature:
BLAST of CF836547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PHS_MICAN6.190e-1337.04Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS1_GLOVI2.601e-1135.45Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_03C08_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836547 ID=CF836547; Name=CF836547; organism=Citrus sinensis; type=EST; length=766bp
CCCGTTCGGAGACTAGAAGTGGGTTTGGTGAGAAGTGTTGGGAAATGTTG
ACCCTTAACCAAAATACTCATTCCAAAATTGTCAGCTCTGTCACTTGCTG
AGCAAGACTGCTCTCCTGCCTCTCCTTTCCAGACTCCTATGTCTGCCGAT
GATGCTAAGAAGTTGCTCAAGAAGGTTGTTGGCTGGAGACTTTTGGAAGA
AGGTGGACTTAAACTACAGTGCTTGTGGAAATTAAGAGATTTTAAATGTG
GGGTTGAACTCATCAATAGGATATACAAGGTGACAGAAGCTGCTGGACAT
TTTCCAAATCTCCACTTGGAGCAGCCCAATCAAGTTAGAGCTGAACTATG
GACTTCTTCCATCGGAGGCTTGAGCATGAATGATTTCATTGTAGCAGCAA
AATTAGATCAGATAAGAACATCAGATCTTGCTCCCAGAAAAAGAATTTGG
GCATAGGCAGAGCATACTCTTTCTCTCCCCGAAGAAACACAAAAAGTCTG
TCCGCTCATGTCTTTCTCAGCACTCGATAACAGCAAACAAAGGGCTCATG
TTGGGACAAGTTTATGAGAAAAGACCAATCTTTTTCTTTCCATTTTTACT
CTTTGTAACTTGTGCATATGGAGTTAAGATGTCTTCATCCATCCATGTTG
CGTTTCATGTCACAAATTAATATATATAGTTATTGTACTTATTGTGAGAC
CATTCATCCATATTCATTGTTCAGCTTGTGCTAATGAAAATAAATCTCTT
TTTAAGTAAAAAAAAA
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