CF836552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836552 vs. ExPASy Swiss-Prot
Match: WRK25_ARATH (Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22 Identity = 78/236 (33.05%), Postives = 105/236 (44.49%), Query Frame = 1 Query: 46 MNPTSFTDLLTSSAPADHAQLHXXXXXXXXXXXXRGLSDRIAERTGSGVPKFKSIQXXXXXXXXXXXXXXXXXXXXXAGLSPAELLDSPVLLNTSNVLPSPTTGAF--QSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTRPNTTSSIAQQNQPWNYQESTKQDVKLAXXXXXXXXXXXXXXXXXXXDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFP 747 M+ TSFTDLL SS + ERTGSG+PKFK+ Q + ++ LDSP+LL++S+ L SPTTG F Q FN +N N SDF + Q++P+ SS Q+ + Q+ K+ + FG + + S+ S+DGY WRKYGQKQVK SENPRSY+KCT+P Sbjct: 1 MSSTSFTDLLGSSG------VDCYEDDEDLRVSGSSFGGYYPERTGSGLPKFKTAQPPPLPISQSSH-----------NFTFSDYLDSPLLLSSSHSLISPTTGTFPLQGFNGTTN--------------NHSDFPWQLQSQPSNASSALQET--YGVQDHEKKQEMIPNEIATQNNNQ---------SFGTERQIKIPAYMVSRNSNDGYGWRKYGQKQVKKSENPRSYFKCTYP 194
BLAST of CF836552 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.733e-20 Identity = 65/165 (39.39%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 286 SPAELLDSPVLLNTS-NVLPSPTTGAFQSFNWKSNIGSNDQQSVKQENKNQSDFSF---------PTQTRPNTTSSIAQQNQPWNYQESTKQDVKLAXXXXXXXXXXXXXXXXXXXDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPS 750 SP+ LDSP +++S NVL SPTTGA + N + G N+ N N DFSF PT T TT++ + + QE K++ + S RE +K +DGYNWRKYGQKQVKGSENPRSYYKCTFP+ Sbjct: 65 SPSLFLDSPAFVSSSANVLASPTTGALIT-NVTNQKGINEGDKSNNNNFNLFDFSFHTQSSGVSAPTTTTTTTTTTTTTNSSIFQSQEQQKKNQS---------------EQWSQTETRPNNQAVSYNGREQRKGEDGYNWRKYGQKQVKGSENPRSYYKCTFPN 213
BLAST of CF836552 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 61/159 (38.36%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 280 GLSPAELLDSPVLLNTSNVLPSPTTGAF--QSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTRPNTTSSIAQQNQPWNYQESTKQDVKLAXXXXXXXXXXXXXXXXXXXDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPS 750 GL+PA+ LDSP+L +SN+LPSPTTG F QS N+ +N D+ +K E+ T P S+ Q P +S+ + +K SDDGYNWRKYGQKQVKGSENPRSY+KCT+P+ Sbjct: 34 GLTPADFLDSPLLFTSSNILPSPTTGTFPAQSLNYNNNGLLIDKNEIKYEDT----------TPPLFLPSMVTQPLP------------------------------------QLDLFKSEIMSSNKTSDDGYNWRKYGQKQVKGSENPRSYFKCTYPN 146
BLAST of CF836552 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15 Identity = 57/159 (35.85%), Postives = 72/159 (45.28%), Query Frame = 1 Query: 280 GLSPAELLDSPVLLNTSNVLPSPTTGAFQSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTRPNTTSSIAQQ---NQPWNYQESTKQDVKLAXXXXXXXXXXXXXXXXXXXDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFP 747 GLSPA LLDSP L L SP G++ + + Q+V+ Q +P ++ + SS Q + P Q T D +H+ QP+ K +DDGYNWRKYGQKQVKGSE PRSYYKCT P Sbjct: 129 GLSPAMLLDSPSFLG----LFSPVQGSY-GMTHQQALAQVTAQAVQANANMQPQTEYPPPSQVQSFSSGQAQIPTSAPLPAQRETS-------------------------DVTIIEHRSQQPLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTNP 257
BLAST of CF836552 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.424e-14 Identity = 53/161 (32.92%), Postives = 76/161 (47.20%), Query Frame = 1 Query: 280 GLSPAELLDSPVLLNTSNVLPSPTTGAFQSFNWKSNIGSNDQ----QSVKQENKNQSDFSFPTQTRPNTTSSIAQQNQPWNYQESTKQDVKLAXXXXXXXXXXXXXXXXXXXDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPS 750 GLSPA LLDSP L SP G F + ++ Q +V + QS++ TQ + + P ++ + + ++ + + ++H+ SQP K +DDGYNWRKYGQKQVKGS+ PRSYYKCT P+ Sbjct: 132 GLSPATLLDSPSFFG----LFSPLQGTFGMTHQQALAQVTAQAVQGNNVHMQQSQQSEYPSSTQQQQQQQQQASLTEIP-SFSSAPRSQIRASVQETSQGQRETS-------EISVFEHR-SQPQNADKPADDGYNWRKYGQKQVKGSDFPRSYYKCTHPA 279 The following BLAST results are available for this feature:
BLAST of CF836552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836552 ID=CF836552; Name=CF836552; organism=Citrus sinensis; type=EST; length=751bpback to top |