CF836583

Overview
NameCF836583
Unique NameCF836583
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF836583_ssr20 microsatellite CF836583_ssr20:20..31. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9487 contig Csv1_Contig9487:731..1615. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 76/242 (31.40%), Postives = 119/242 (49.17%), Query Frame = -1
Query:  211 NALKGCSGLFYSFEPPSDHSTXDE---LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRF---YVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXSFEDTRVHPQRVSNKKLNKLMVNF 885
            +A++GC+G+F+   P    S   E   +   VE M +  ++ AC +  TV ++VFTSS    V    R  P    +DE +W+DV+ C++ K+  W + +SKTLAEK A A A + G+ +V+I   LV+GP ++ S P         + G A  Y   ++  V L       DA I +FE+ ++ GRY+C +H +  +  A  L                 +D  + P R S+KKL  L   F
Sbjct:   78 DAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMIS--IMRACKEAGTVRRIVFTSS-AGTVNLEERQRPV---YDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHY--SILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDD--LQPVRFSSKKLQDLGFTF 309          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 75/245 (30.61%), Postives = 117/245 (47.76%), Query Frame = -1
Query:  193 ALKGCSGLFYSFEPPSDHSTXDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--YLKGAAEMYED----GVMAS---VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXSFE--DTRVHPQRVSNKKLNKLMVNFDGEFQD 882
            A++GCSG+F+   P    S   E      T+    ++L+AC +  TV K+VFTSS   V    H+  P    +DE NWSDV  C+  K+  W + +SKTLAE+ AW  A +  I  ++I   LV+GP +  S P   + G + +  +    G++     V L     +HI ++E   + GRY+C +H    +E    L +M             F+  D  + P   S+KKL ++   F    +D
Sbjct:   74 AIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQ-KPV---YDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHE----LVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLREIGFEFKYSLED 310          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.372e-17
Identity = 74/245 (30.20%), Postives = 117/245 (47.76%), Query Frame = -1
Query:  193 ALKGCSGLFYSFEPPSDHSTXDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--YLKGAAEMYED----GVMAS---VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXSFE--DTRVHPQRVSNKKLNKLMVNFDGEFQD 882
            A++GCSG+F+   P    S   E      T+    ++L+AC +  TV K+VFTSS   V    H+  P    +DE NWSDV  C+  K+  W + +SKTLAE+ AW  A +  I  ++I   LV+GP +  S P   + G + +  +    G++     V L     +HI +++   + GRY+C +H    +E    L +M             F+  D  + P   S+KKL ++   F    +D
Sbjct:   74 AIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQ-KPV---YDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHE----LVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLREIGFEFKYSLED 310          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.993e-17
Identity = 70/240 (29.17%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  211 NALKGCSGLFYSFEPPSDHSTXDELTAEVETMAAH-NVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN--LCKKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS---------NPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXSFE--DTRVHPQRVSNKKLNKLMVNF 885
            +A+ GC G+F+   P    S   E      T+     +++AC +  TV + VFTSS   V    H+ N     +DE +WSD+   + KK   W + +SKTLAEK AW  A ++G+  +SI   LV+GP +T S         +P  +  A          V L    +AHI ++E  ++ GRY+C +H    +   + +++             +FE  D  +     S+KKL  +  NF
Sbjct:   73 DAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKNV----YDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHIFLYEQAAAKGRYICSSH----DATILTISKFLRPKYPEYNVPSTFEGVDENLKSIEFSSKKLTDMGFNF 304          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 76/247 (30.77%), Postives = 112/247 (45.34%), Query Frame = -1
Query:  193 ALKGCSGLFYSFEPPSDHSTXDE---LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS---------VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXSFE--DTRVHPQRVSNKKLNKLMVNFDGEFQD 882
            A+KGC+G+F+   P    S   E   +   +E M    ++++CA   TV ++VFTSS   V    H+       +DE  WSD+  C  KK   W + +SKTLAE+ AW  A +  I  ++I   LV+GP +  S P     A     G  A          V L    +AHI +FE+  + GRY+C +H  +C    + LA+M             F+  D  +     S+KKL  L   F    +D
Sbjct:   74 AIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLG--IMKSCAAAKTVRRLVFTSSAGTVNIQEHQ----LPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSH--DC--IILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLED 310          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.420e-14
Identity = 72/234 (30.77%), Postives = 107/234 (45.73%), Query Frame = -1
Query:  232 ALKGCSGLFYSFEPPSDHSTXDE---LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS---------VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXSFE--DTRVHPQRVSNKKL 882
            A+ GC+G+F+   P    S   E   +   VE M +  ++ AC +  TV ++VFTSS  +V   N  + P    +D+ NWSD++ C++ K+  W + +SK LAEK A   A + G+  +SI   LV+GP ++   P     A     G  A          V L    DA   +FE   + GRY+C +H    +     LARM             F   D  + P   S+KKL
Sbjct:   74 AIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLS--IMRACKEAGTVKRIVFTSSAGSV---NIEERPRPA-YDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMTFLFEHPEANGRYICSSH----DATIHGLARMLQDRFPEYDIPQKFAGVDDNLQPIHFSSKKL 297          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.420e-14
Identity = 60/187 (32.09%), Postives = 89/187 (47.59%), Query Frame = -1
Query:  361 ALKGCSGLFYSFEPPSDHSTXDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS---------VDLRFYVDAHICVFEDVSSYGRYLCFNH 882
            A++GC G+F+   P    S   E      T+    +++ +C +  TV K+VFTSS   V    +      H +DE +WSD++    KK   W + +SKTLAEK AW       IS +SI   LV+GP +T + P     A     G  A          V L    + HI ++E+  + GRY+C +H
Sbjct:   75 AIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV----NGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLYENPKAKGRYICSSH 257          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 54/194 (27.84%), Postives = 94/194 (48.45%), Query Frame = -1
Query:  370 NALKGCSGLFYSFEP---PSDHSTXDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC---KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---------------YLKGAAEMYE-DGVMASVDLRFYVDAHICVFEDVSSYGRYLC 885
            ++  GC  +F+   P    S+    D +   ++ +   NVL++C ++ +V +V++TSS  AV  NN   + T    +E NW+DV      K F   + +SK LAEKTAW  A +  I++V++   L+ G  +    P               ++ G  EM +  G ++ V +     AH+ + E  ++ GRY+C
Sbjct:   77 SSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVI--NVLKSCLKSKSVKRVIYTSSAAAVSINNL--SGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYIC 266          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 60/184 (32.61%), Postives = 93/184 (50.54%), Query Frame = -1
Query:  361 ALKGCSGLFYSFEPPSDHSTXDELTAEVETMAAH-NVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL--CKKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-NPYLKGAAEMY--EDGVMAS---VDLRFYVDAHICVFEDVSSYGRYLCFNH 882
            A++GC G+F+   P    S   E      T+    +++E+CA+ NTV ++VFTSS  A   +   D      +DE +WSD++    KK   W + +SK LAEK A   A    I  +SI   LV+GP +T +  P L  A  +     G++     V L    +AHI ++E   + GR++C +H
Sbjct:   86 AIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSS--AGTLDVQEDQKLF--YDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITSTFPPSLITALSLITAHYGIIKQGQYVHLDDLCEAHIFLYEHPKAEGRFICSSH 265          
BLAST of CF836583 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12
Identity = 71/247 (28.74%), Postives = 108/247 (43.72%), Query Frame = -1
Query:  193 ALKGCSGLFYSFEPPSDHSTXDELTAEVETMAAH-NVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMAS-VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAM--KLARMXXXXXXXXXXXXSFE--DTRVHPQRVSNKKLNKLMVNFDGEFQD 882
            A++GC G+F+   P    S   E      T+    +++ +CA+  TV K+V+TSS   V    +        +DE +WSD++    KK   W + +SKTLAEK A   A +  I  VSI   LV+GP +  + P         + GA   Y        V L    + HI ++E+  + GRY+C        +DA   +LARM             F   D  +     S+KKL  +   F  + +D
Sbjct:   75 AIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV----NVQETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGAESHYSIIKQGQYVHLDDLCECHIFLYENPEAKGRYIC------SKQDATIHQLARMIKQKWPEYHVPTQFAGIDEELPTVSFSSKKLIDMGFKFKYDLED 311          
The following BLAST results are available for this feature:
BLAST of CF836583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DFRA_MAIZE3.611e-1831.40Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_MALDO4.717e-1830.61Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_PYRCO1.372e-1730.20Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_ARATH3.993e-1729.17Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_VITVI1.678e-1530.77Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_HORVU1.420e-1430.77Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_GERHY1.420e-1432.09Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
BAN_ARATH3.867e-1227.84Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
DFRA_SOLLC5.051e-1232.61Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
DFRA_CALCH6.597e-1228.74Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_03D11_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836583 ID=CF836583; Name=CF836583; organism=Citrus sinensis; type=EST; length=885bp
TTTTTTTTTTTTTTATTGAATTTATTTATTTCGAAAGATCAAAGAAGCTT
TTCCCTTAATATAAGAGCTTGTGCTTTTAACATTTGAACCCTTAAGAGCT
TAATTTGTGTAAAAACATACACAAGAAAAGAACTTAAATATTTAAACAAA
ATTATAAATTACATAATTGCCATATTAGTCCGCGGAGCAATCATCTTGAA
ACTCGCCATCAAAATTTACCATCAGTTTGTTCAGCTTCTTGTTGCTTACT
CTCTGTGGGTGCACTCTTGTATCCTCAAAACTTAGCGGAGGAGTTGAAGT
GTCGGAGGGTGGCAATAGCATGCGGGCGAGCTTCATGGCGTCTTCGTTGC
AGTTGATGACGTGGTTGAAGCAGAGATAACGACCGTACGATGAAACGTCT
TCGAACACGCAAATGTGAGCATCAACGTAGAATCTCAGGTCCACCGAAGC
CATCACACCATCTTCGTACATCTCGGCCGCTCCTTTTAGATACGGATTCG
AGATCGTGACGTCTGGACCCATCACCAGCCCTCCGTTTATCGACACCATG
CTTATTCCCCGGTCCATCGCTAGGGCCCACGCTGTCTTCTCCGCCAGCGT
CTTTGACAAACCGTGCCATAACTTGAATTTCTTGCACAAATTGACGTCAC
TCCAATTTCGCTCATCGAAGTCATGCGACGTCGGATTGTCGCGGTGGTTA
TTCCAGACGACGGCGGTTAGAGAAGACGTGAAGACGACTTTGTCAACTGT
ATTTGTCTGTGCGCACGCTTCCAGCACGTTGTGAGCTGCCATTGTCTCTA
CTTCCGCCGTTAATTCATCNTAGGTGGAGTGGTCGGAGGGAGGCTCAAAG
GAGTAGAACAGACCGGAGCAACCCTTTAAAGCATT
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