CF836605

Overview
NameCF836605
Unique NameCF836605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1184 contig Csv1_Contig1184:1..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYA_RICCO (Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 452.21 bits (1162), Expect = 1.295e-126
Identity = 230/242 (95.04%), Postives = 235/242 (97.11%), Query Frame = 3
Query:    3 GPPSARAEDGEIWTFTVRAFDAPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            G  SA+AEDGEIWTF+VRA+D+PRPERTI VNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTIS KDWLDIDFGI EGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEII ASDGAMVARGDLGAQIPLEQVPSAQQ IVQ+CRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML
Sbjct:  181 GASSAKAEDGEIWTFSVRAYDSPRPERTINVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISSKDWLDIDFGIAEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIRASDGAMVARGDLGAQIPLEQVPSAQQNIVQVCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 422          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYA_TOBAC (Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 434.106 bits (1115), Expect = 3.649e-121
Identity = 219/242 (90.50%), Postives = 227/242 (93.80%), Query Frame = 3
Query:    3 GPPSARAEDGEIWTFTVRAFDAPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            G  SA+AEDGEIW FTVR+FD P PERT+TVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKC CTDPGLLLPRANLTFWRDG LVRERNAMLPTIS KDWLDIDFGI EGVDFIA+SFVKSAEVI HLKSYI AR+RDSDI+VIAKIESIDSLKNLEEII ASDGAMVARGDLGAQIPLEQVPS QQKIVQ+CRQLN+PVIVASQLLESMIEYP PTRAEVADVSEAVRQR DALML
Sbjct:  191 GASSAKAEDGEIWNFTVRSFDPPLPERTVTVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCLCTDPGLLLPRANLTFWRDGKLVRERNAMLPTISSKDWLDIDFGIAEGVDFIAVSFVKSAEVIKHLKSYIQARARDSDISVIAKIESIDSLKNLEEIIQASDGAMVARGDLGAQIPLEQVPSEQQKIVQICRQLNRPVIVASQLLESMIEYPIPTRAEVADVSEAVRQRGDALML 432          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYG_TOBAC (Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.574e-58
Identity = 122/241 (50.62%), Postives = 165/241 (68.46%), Query Frame = 3
Query:    6 PPSARAEDGEIWTFTVRAFDAPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            P     ++G+ + F+++       E T++VNYD F  DV+ GD LLVDGGM+   V  K    VKC   D G L  R +L        VR ++A LP+I+ KDW DI FG+   VDF A+SFVK A+V++ LK Y+  +S ++DI VI KIES DS+ NL  II ASDGAMVARGDLGA++P+E+VP  Q+ I++ C+ + KPVIVA+ +LESMI++PTPTRAEV+D+S AVR+ ADA+ML
Sbjct:  168 PKPILLKEGQEFNFSIKR--GVSTEDTVSVNYDDFINDVEAGDILLVDGGMMSLAVKSKTSDIVKCEVIDGGELKSRRHLN-------VRGKSATLPSITEKDWDDIKFGVNNQVDFYAVSFVKDAKVVHELKDYL--KSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEEVPLLQEDIIRRCQSMQKPVIVATNMLESMIDHPTPTRAEVSDISIAVREGADAVML 397          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYG_RICCO (Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.845e-56
Identity = 121/240 (50.42%), Postives = 161/240 (67.08%), Query Frame = 3
Query:    9 PSARAEDGEIWTFTVRAFDAPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            P    ++G+ +  T+R       + T++VNYD F  DV VGD LLVDGGM+   V  K    VKC   D G L  R +L        VR ++A LP+I+ KDW DI FG+   VDF A+SFVK A+V++ LK Y+  +  ++DI VI KIES DS+ NL  II ASDGAMVARGDLGA++P+E+VP  Q+ I++ C  + KPVIVA+ +LESMI +PTPTRAEV+D++ AVR+ ADA+ML
Sbjct:   26 PQPMLKEGQEFNPTIRR--GVSTQDTVSVNYDDFVNDVVVGDILLVDGGMMSLAVKSKTSDLVKCVVVDGGELKSRRHLN-------VRGKSARLPSITDKDWGDIKFGVDNQVDFYAVSFVKDAKVVHELKEYL--KRCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEEVPLLQEDIIRRCHSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVREGADAVML 254          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.865e-38
Identity = 87/216 (40.28%), Postives = 132/216 (61.11%), Query Frame = 3
Query:   87 ITVNYDGFAEDVKVGDELLVDGGMVRFEV--IEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            I+++Y G  + VKVG  +L+  G++   +  +EK    V CR  +   L    N+     G++V      LP +S KD LDI FG+ + VDFIA SF++ A+ +N ++  +  + +D  I +I+KIE+++ + N  EI+  SDG MVARGDLG ++ +E++  AQ+ IV  C    KPVI A+Q+LESMI+ P PTRAE  DV+ AV   +D +ML
Sbjct:  125 ISIDYKGLLDSVKVGGYILIADGVISLSITAVEKEKGHVVCRVNNNSRLGENKNVHL--PGAIVN-----LPAVSEKDILDIKFGVEQNVDFIAASFIRKADDVNEIREILGEKGKD--IQIISKIENVEGVDNFNEILEVSDGIMVARGDLGVEVQMEKIFVAQKMIVSKCNAAGKPVITATQMLESMIKNPRPTRAEATDVANAVLDGSDCVML 331          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYK1_SYNY3 (Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC 6803) GN=pyk1 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.610e-38
Identity = 84/214 (39.25%), Postives = 135/214 (63.08%), Query Frame = 3
Query:   87 ITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            + ++Y   A + KVG+ +L+D G++  +V+    P+V C     G+L  R  +       LV      LP+++ KD  D++FG+++G+D++++SFV+  E I+ LK ++A R    D+ VIAKIE   ++ NLEEI+  S+G MVARGDLG ++  E+VP  Q++I++ C     PVI A+Q+L+SMI+   PTRAE +DV+ A+    DA+ML
Sbjct:  119 VGIDYPHLATEAKVGERILLDDGLLEMKVVSIQDPEVICEVVTGGILKSRKGVNL---PGLV----LTLPSMTTKDKQDLEFGLSQGIDWVSLSFVRKGEDIHTLKQFLAERGHP-DLPVIAKIEKPQAIDNLEEIVAVSNGIMVARGDLGVEVNPEKVPRLQKEIIRRCNVRAIPVITATQMLDSMIQNSRPTRAEASDVANAILDGTDAVML 324          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYK_CORGL (Pyruvate kinase OS=Corynebacterium glutamicum GN=pyk PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.124e-37
Identity = 97/238 (40.76%), Postives = 138/238 (57.98%), Query Frame = 3
Query:   24 EDGEIWTFTVRAFDAPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKS---AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            E+GE  T  +   D       ++  Y   A+D K GD LLVD G V    +   G DV C   + G   P +N      G  +   +  +P +S KD  D+ F +  GVDFIA+SFV+S   AE+++ +      R     + VIAK+E  +++ +LE I+LA D  MVARGDLG ++PLE+VP  Q++ +Q+ R+  KPVIVA+Q+L+SMIE   PTRAE +DV+ AV   ADA+ML
Sbjct:   86 ENGE--TIRITVDDVEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVGLVCVSVEGNDVICEVVEGG---PVSN----NKGVSLPGMDISVPALSEKDIRDLRFALKLGVDFIALSFVRSPADAELVHKIMDEEGRR-----VPVIAKLEKPEAVTSLEPIVLAFDAVMVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVML 309          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYK_THEMA (Pyruvate kinase OS=Thermotoga maritima GN=pyk PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.918e-37
Identity = 95/235 (40.43%), Postives = 140/235 (59.57%), Query Frame = 3
Query:   24 EDGEIWTFTVRAFDAPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            ++G+I+T T +  +    E  ++VN     +DVK GD +L+  G +  EVIE    +VK      G +  R  +        V   +  + +I+ +D   I  G    V+F A+SFV+  E +  LK+    R    +I VI+KIE+  +L+ LEEII  SDG MVARGDLG +IP+E+VP  Q++I++L +  +KPVIVA+Q+LESMIE P PTRAEV D++ A+   ADAL+L
Sbjct:   85 KEGQIFTLTTK--EILGNEHIVSVNLSSLPKDVKKGDTILLSDGEIVLEVIETTDTEVKTVVKVGGKITHRRGVN-------VPTADLSVESITDRDREFIKLGTLHDVEFFALSFVRKPEDV--LKAKEEIRKHGKEIPVISKIETKKALERLEEIIKVSDGIMVARGDLGVEIPIEEVPIVQKEIIKLSKYYSKPVIVATQILESMIENPFPTRAEVTDIANAIFDGADALLL 308          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYK_MYCIT (Pyruvate kinase OS=Mycobacterium intracellulare GN=pyk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.272e-37
Identity = 98/237 (41.35%), Postives = 135/237 (56.96%), Query Frame = 3
Query:   27 DGEIWTFTVRAFDAPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKS---AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            DGE    TV   D       ++  Y   AED  VGD +LVD G V   V    G DV C   + G   P +N      G  +   N   P +S KD  D+ F +  GVD +A+SFV+S    E+++ +   +  R     + VIAK+E  +++ NLE I+LA D  MVARGDLG ++PLE+VP  Q++ +Q+ R+  KPVIVA+Q+L+SMIE   PTRAE +DV+ AV   ADA+ML
Sbjct:   87 DGETVRITVA--DCEGSHDRVSTTYKKLAEDAAVGDRVLVDDGKVCLVVDGIEGDDVICTVVEGG---PVSN----NKGISLPGMNVSAPALSEKDIEDLTFALDLGVDLVALSFVRSPADVELVHEVMDRVGRR-----VPVIAKLEKPEAVDNLETIVLAFDAIMVARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVML 309          
BLAST of CF836605 vs. ExPASy Swiss-Prot
Match: KPYK_COREF (Pyruvate kinase OS=Corynebacterium efficiens GN=pyk PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.272e-37
Identity = 96/235 (40.85%), Postives = 135/235 (57.45%), Query Frame = 3
Query:   24 EDGEIWTFTVRAFDAPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 728
            E GE    TV   D       ++  Y   A+D + GD LLVD G V    +   G DV C  T+ G   P +N      G  +   +  +P +S KD  D+ F +  GVDFIA+SFV+S   +  + + +    R   + VIAK+E  +++  LE I+LA D  MVARGDLG ++PLE+VP  Q++ +Q+ R+  KPVIVA+Q+L+SMIE   PTRAE +DV+ AV   ADA+ML
Sbjct:   86 ETGETVRITVD--DVEGTHDRVSTTYKNLAKDARPGDRLLVDDGKVGLVCVSVEGNDVICEVTEGG---PVSN----NKGVSLPGMDISVPALSEKDIKDLRFALKLGVDFIALSFVRSPADVELVHAIMDEEGRR--VPVIAKLEKPEAVAALESIVLAFDAIMVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVML 309          
The following BLAST results are available for this feature:
BLAST of CF836605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYA_RICCO1.295e-12695.04Pyruvate kinase isozyme A, chloroplastic OS=Ricinu... [more]
KPYA_TOBAC3.649e-12190.50Pyruvate kinase isozyme A, chloroplastic OS=Nicoti... [more]
KPYG_TOBAC2.574e-5850.62Pyruvate kinase isozyme G, chloroplastic OS=Nicoti... [more]
KPYG_RICCO1.845e-5650.42Pyruvate kinase isozyme G, chloroplastic (Fragment... [more]
KPYK_DICDI3.865e-3840.28Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK1_SYNY38.610e-3839.25Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC... [more]
KPYK_CORGL1.124e-3740.76Pyruvate kinase OS=Corynebacterium glutamicum GN=p... [more]
KPYK_THEMA1.918e-3740.43Pyruvate kinase OS=Thermotoga maritima GN=pyk PE=1... [more]
KPYK_MYCIT3.272e-3741.35Pyruvate kinase OS=Mycobacterium intracellulare GN... [more]
KPYK_COREF3.272e-3740.85Pyruvate kinase OS=Corynebacterium efficiens GN=py... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_03E05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836605 ID=CF836605; Name=CF836605; organism=Citrus sinensis; type=EST; length=730bp
GCGGCCCTCCGTCCGCCAGAGCTGAGGATGGTGAAATCTGGACTTTTACT
GTTAGAGCTTTTGACGCACCTCGCCCGGAACGCACCATCACTGTAAACTA
TGATGGATTTGCTGAAGATGTGAAAGTTGGGGATGAACTTCTTGTGGATG
GTGGAATGGTGAGGTTTGAGGTGATTGAGAAGATTGGACCTGATGTCAAA
TGCCGTTGCACTGATCCTGGACTGTTGCTACCACGAGCTAATTTAACTTT
CTGGAGGGATGGGAGTCTTGTACGAGAGCGTAATGCTATGCTCCCAACAA
TTTCTCCTAAGGATTGGCTGGACATCGATTTTGGAATTACTGAAGGTGTT
GATTTTATAGCCATTTCATTTGTCAAGTCTGCTGAAGTAATTAATCACCT
GAAGAGCTATATTGCTGCACGATCTCGTGATAGTGATATTGCTGTCATTG
CAAAGATTGAGAGTATCGACTCTTTAAAGAACTTGGAAGAGATCATTCTA
GCATCAGATGGAGCTATGGTTGCCAGAGGAGATTTGGGTGCCCAGATACC
ATTGGAGCAGGTGCCGTCAGCCCAGCAAAAGATTGTTCAGCTTTGCAGGC
AGCTGAATAAGCCAGTCATTGTTGCCTCCCAGTTGCTTGAATCTATGATT
GAGTACCCTACACCAACCAGAGCTGAAGTAGCTGATGTTTCTGAAGCAGT
TAGACAGAGAGCAGATGCTTTAATGCTATC
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