CF836610

Overview
NameCF836610
Unique NameCF836610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_TENMO (Trehalase OS=Tenebrio molitor PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.337e-34
Identity = 85/250 (34.00%), Postives = 130/250 (52.00%), Query Frame = -3
Query:  169 SGWDFSTRWMRNT-----SDFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIV--EKVRKSFQSSGLLGA-AGIATSLTRSE------------------GLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 840
            SGWDFS+RW+ +       + + L    I+PVDLN F+ +    +    Q +GD   A  + K  +  + +I+ V +N ++G W D W +           + S      F SNF P+W + F+S    +  E   + F +  ++    GI TSL+ +                   GL KSGS+ AK +A+++A RW+  N + +++TG M EKYNVE  G  GGGGEY+ Q+GFGW+NGVVL F+ +F
Sbjct:  315 SGWDFSSRWIVDEYGGTRGNLSALHTRRIIPVDLNAFLCQAFQKLSEFYQTLGDYPNATFWSKLVKIWQHSIEMVHYNRDDGIWYD-WDN-----------ELSQHRRMFFPSNFAPLWSETFDSRNAEILGEMAAEYFITQNMMDYHGGIPTSLSHTGEQWDYPNAWPPMQSIIVMGLDKSGSYRAKQLARELARRWVKANLIGFRQTGEMFEKYNVEVPGQNGGGGEYVVQSGFGWTNGVVLEFINQF 552          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_HUMAN (Trehalase OS=Homo sapiens GN=TREH PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 4.026e-32
Identity = 80/247 (32.39%), Postives = 123/247 (49.80%), Query Frame = -3
Query:  166 SGWDFSTRWM---RNTSDFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAA-GIATSLTRS------------------EGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 840
            SGWDFS+RW+    N +  + +  + ++PVDLN F+ + E  + +    +G++  A  +      R AA+++V W+E+ G W DY +                +N   + SN  P+W   F SD  + +K  K  + + +L    GI TSL ++                   GL K+    A+ +A  +A  WI TN+  Y +  AM+EKY+V   G  GGGGEY  Q GFGW+NGVVL  L+ +G
Sbjct:  318 SGWDFSSRWLIGGPNPNSLSGIRTSKLVPVDLNAFLCQAEELMSNFYSRLGNDSQATKYRILRSQRLAALNTVLWDEQTGAWFDYDLEK------------KKKNREFYPSNLTPLWAGCF-SDPGVADKALKYLEDNRILTYQYGIPTSLQKTGQQWDFPNAWAPLQDLVIRGLAKAPLRRAQEVAFQLAQNWIRTNFDVYSQKSAMYEKYDVSNGGQPGGGGEYEVQEGFGWTNGVVLMLLDRYG 551          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_MOUSE (Trehalase OS=Mus musculus GN=Treh PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.610e-31
Identity = 79/247 (31.98%), Postives = 120/247 (48.58%), Query Frame = -3
Query:  166 SGWDFSTRWMRNTSD---FTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAA-GIATSLTRS------------------EGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 840
            SGWDFS+RW+    D    +++  + ++P DLN F+ + E  + +    +G++  A  +      R AA+++V W+E+ G W DY +  G             +N   + SN  P+W   F SD  + +K  K  + S +L    GI TSL  +                   GL KS S   + +A  +A  WI TN+  Y +  AM EKY++   G  GGGGEY  Q GFGW+NG+ L  L+ +G
Sbjct:  315 SGWDFSSRWLVGGPDPDLLSSIRTSKMVPADLNAFLCQAEELMSNFYSRLGNDTEATKYRNLRAQRLAAMEAVLWDEQKGAWFDYDLEKG------------KKNLEFYPSNLSPLWAGCF-SDPSVADKALKYLEDSKILTYQYGIPTSLRNTGQQWDFPNAWAPLQDLVIRGLAKSASPRTQEVAFQLAQNWIKTNFKVYSQKSAMFEKYDISNGGHPGGGGEYEVQEGFGWTNGLALMLLDRYG 548          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_RABIT (Trehalase OS=Oryctolagus cuniculus GN=TREH PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.813e-31
Identity = 80/247 (32.39%), Postives = 118/247 (47.77%), Query Frame = -3
Query:  166 SGWDFSTRWM---RNTSDFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLG-AAGIATSLTRS------------------EGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 840
            SGWDFS+RW+    N     ++  + ++PVDLN F+ + E  +      +G+   A  +      R AA+ ++ W+E+ G W DY + N              +N+  + SN  P+W   F SD  I +K  +  Q S +L    GI TSL  +                   GL KS S   + +A  +A  WI TN+  Y +  AM+EKY++      GGGGEY  Q GFGW+NGV L  L+ +G
Sbjct:  318 SGWDFSSRWLVGSPNPDSLGSIRTSKLVPVDLNAFLCQAEELLSGFYSRLGNESQATKYRNLRAQRIAALTALLWDEDKGAWFDYDLEN------------QKKNHEFYPSNLTPLWAGCF-SDPAIADKALQYLQDSQILNHRHGIPTSLQNTGQQWDFPNAWAPLQDLVIRGLAKSPSARTQEVAFQLAQNWIRTNFDVYSQRSAMYEKYDISN-AQPGGGGEYEVQEGFGWTNGVALMLLDRYG 550          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_APIME (Trehalase OS=Apis mellifera PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.691e-30
Identity = 84/250 (33.60%), Postives = 120/250 (48.00%), Query Frame = -3
Query:  166 SGWDFSTRWM----RNTSDFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFN--SDTCIVEKVRKSFQSSGL-LGAAGIATSLTRSE------------------GLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 840
            SGWDFS+RW      N  + T L    I+PVDLN  I +  + +    Q +G+      + K A   K AI +V W++E G WLDY I N              + +  + +N +P+W D ++       V KV K  + + + L   GI T+L  S                    L K+    A+ +A +I+ RW+ +NY AY ET +M EKY+    G  GGGGEY  Q GFGWSNGV++  L  +G
Sbjct:  332 SGWDFSSRWFILDGTNKGNLTNLKTRYIIPVDLNSIIYRNAVLLAQYNQRMGNESKVAYYQKRAAEWKRAIQAVLWHDEVGAWLDYDILNDI------------KRDYFYPTNILPLWTDCYDIAKREEYVSKVLKYLEKNKIMLNLGGIPTTLEHSGEQWDYPNAWPPLQYFVIMALNKTEDPWAQRLAYEISERWVRSNYKAYNETHSMFEKYDATVSGGHGGGGEYEVQLGFGWSNGVIMDLLNRYG 569          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_DICDI (Trehalase OS=Dictyostelium discoideum GN=treh PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28
Identity = 78/254 (30.71%), Postives = 125/254 (49.21%), Query Frame = -3
Query:  166 SGWDFSTRWMR--NTSDFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNS---DTCIVEKVRKSFQSSGLLGAAGIATSLTRSEGLGKSGSHE-------------------AKSMAQDIAMRWINTNYVAYKET-----GAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 840
            SGWDFS+RWM   + ++ TT+    ++PVDLN  +   E  + S  + +G+N  A  +   +++R  A+  VF+NE+  QW DY +            K S  N   + SN +P++ D+ +S   D   ++ + KS  +  +    G+ TSL  ++ L   G +                    +  + +++  RWI TN+  +  T     G M EKYN    G  GGGGEY+ Q GFGW+NGV L  L+++G
Sbjct:  345 SGWDFSSRWMSPSDNTNLTTIQTVDVVPVDLNSILYLNEKILSSFHRTLGNNSMAVYYQAQSESRVDAMQQVFFNEDTYQWNDYNL------------KTSTNNEAWYTSNILPLFADIQSSIDMDNQEIDLIFKSLANVLIAYPGGVPTSLISAQSLQWDGLNVWPPLQYWIIESIMTPNTTFSNMIGKNLIDRWITTNFCGWNSTLESEGGMMFEKYNANYIGVPGGGGEYVVQNGFGWTNGVDLYLLKKYG 586          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_DROME (Trehalase OS=Drosophila melanogaster GN=Treh PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.016e-28
Identity = 81/260 (31.15%), Postives = 121/260 (46.54%), Query Frame = -3
Query:  139 SGWDFSTRWM-----RNTSDFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFN-SDTCIVEKVRKSFQSSGLLGA--AGIATSLTRS------------------EGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWPADLKIGC 840
            SG DFS+RW       N  + + L+ TSI+PVDLN ++      I       G+ K    +   A+     I  V WNEE G WLDY + N                +    +N  P+W+  FN S++  +     ++     L +   G+  +L+ +                  EGL    + EAK+M+   A RW+ TN+ A+ +   M+EKYN ++ G  GGGGEY  QTGFGWSNGV++ +L + G    +  GC
Sbjct:  340 SGMDFSSRWFISPTGTNDGNRSALSTTSIVPVDLNAYLYWNAKLIAEFHSKAGNTKKVTEYETKAEKLLLGIQEVLWNEEAGVWLDYDMIN------------QKPRDYYTPTNLSPLWVKAFNISESEKISASVMAYIERNKLDSFPGGVPNTLSYTGEQWDAPNVWAPMQYILVEGLNNLNTPEAKNMSLKWATRWVKTNFAAFSKDRHMYEKYNADEFGVGGGGGEYEVQTGFGWSNGVIIEWLSKHGRDISIGSGC 587          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_PIMHY (Trehalase OS=Pimpla hypochondriaca GN=tre1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.340e-27
Identity = 73/249 (29.32%), Postives = 118/249 (47.39%), Query Frame = -3
Query:  169 SGWDFSTRWMRNTS----DFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIV--EKVRKSFQSSGLLG-AAGIATSLTRS------------------EGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 840
            SGWDFS+RW  + +      + +A  +I+PV+LN F+ +    +      +G+   A+ +   A + + AID V W+E  G WLD+ + N            S   N  F +N  P++   F+S    +  ++       +G+L    G   SL  +                  + L  S    A+ +A+++A+RW+  N+  Y ++G M EKY+    G  GGGGEY+ Q GFGW+NGVV  FL  +
Sbjct:  335 SGWDFSSRWYISENGTRGSLSNIATRNIIPVELNAFLQRNARMLAQFHTTLGNPTKAKYYKDIATSYQQAIDDVLWSESEGVWLDFDLRN------------SQHRNYFFPTNVAPLYTQSFDSSKAQIYGQRAAAYLTRNGILDYMGGTPASLFPTGEQWDLPNAWPPLQSIIVQALRNSNEESAEKLAKELAIRWLRANHKGYSQSGQMFEKYDALNPGKFGGGGEYVVQEGFGWTNGVVYEFLNSY 571          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_ECOUT (Periplasmic trehalase OS=Escherichia coli (strain UTI89 / UPEC) GN=treA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/240 (31.67%), Postives = 109/240 (45.42%), Query Frame = -3
Query:  175 SGWDFSTRWMRNTSDFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRS------------------EGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 840
            SGWDFS+RWM N     TL  TSI+PVDLN  + KME  +   ++ +GDN  A  +   A AR+  I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +S                  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  309 SGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAIGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---SKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530          
BLAST of CF836610 vs. ExPASy Swiss-Prot
Match: TREA_ECOK1 (Periplasmic trehalase OS=Escherichia coli O1:K1 / APEC GN=treA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/240 (31.67%), Postives = 109/240 (45.42%), Query Frame = -3
Query:  175 SGWDFSTRWMRNTSDFTTLAITSILPVDLNIFILKMELDIVSMAQIVGDNKTAESFLKAAQARKAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRS------------------EGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 840
            SGWDFS+RWM N     TL  TSI+PVDLN  + KME  +   ++ +GDN  A  +   A AR+  I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +S                  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  309 SGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAIGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---SKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530          
The following BLAST results are available for this feature:
BLAST of CF836610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
TREA_TENMO7.337e-3434.00Trehalase OS=Tenebrio molitor PE=2 SV=1[more]
TREA_HUMAN4.026e-3232.39Trehalase OS=Homo sapiens GN=TREH PE=1 SV=2[more]
TREA_MOUSE2.610e-3131.98Trehalase OS=Mus musculus GN=Treh PE=2 SV=1[more]
TREA_RABIT5.813e-3132.39Trehalase OS=Oryctolagus cuniculus GN=TREH PE=1 SV... [more]
TREA_APIME1.691e-3033.60Trehalase OS=Apis mellifera PE=1 SV=1[more]
TREA_DICDI4.606e-2830.71Trehalase OS=Dictyostelium discoideum GN=treh PE=3... [more]
TREA_DROME6.016e-2831.15Trehalase OS=Drosophila melanogaster GN=Treh PE=1 ... [more]
TREA_PIMHY1.340e-2729.32Trehalase OS=Pimpla hypochondriaca GN=tre1 PE=1 SV... [more]
TREA_ECOUT3.301e-2631.67Periplasmic trehalase OS=Escherichia coli (strain ... [more]
TREA_ECOK13.301e-2631.67Periplasmic trehalase OS=Escherichia coli O1:K1 / ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_03E08_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836610 ID=CF836610; Name=CF836610; organism=Citrus sinensis; type=EST; length=842bp
TTTTTTTTTTTTAATATATCAAGTTCCCACGTTCAATAGAATTGACAAGA
CAAGAAAAAGAAGGGAGAGAATCCAGGATAATTAGGTCGGTAATTATAAA
CCAAGTCAAAGCTCATCTCTTCAGAGCATAACTCCATTGCAACCTATCTT
CAGATCTGCTGGCCACCCAAACTCCTCCAAGAACGCCAACACGACTCCAT
TTGACCAGCCAAAACCAGTCTGGGGTATGTATTCACCACCACCTCCAATA
TCTCCACATTTTTCTACATTATATTTTTCATGCATAGCACCAGTTTCTTT
GTATGCAACATAATTGGTATTGATCCACCTCATAGCAATGTCTTGTGCCA
TCGACTTTGCTTCATGTGATCCTGACTTACCCAAACCTTCTGATCTTGTC
AACGAAGTTGCAATTCCAGCAGCACCGAGTAAGCCTGAACTTTGAAAGCT
TTTTCGGACTTTCTCCACTATACAAGTATCAGAGTTGAATAAATCAATCC
ATATGGGTACAAAGTTTGAGGCAAATGTATTATTATTTTGGTTTGAAGCT
TTCCATCTTTGGCATTCCTGGCTACTAGTTCCATTACTTATCCAGTAATC
CAGCCATTGCCCATTTTCTTCATTCCAGAAAACAGAGTCTATTGCCGCTT
TCCTTGCTTGAGCAGCTTTCAAGAAACTCTCAGCAGTTTTATTGTCTCCA
ACAATTTGTGCCATGGAAACAATGTCAAGTTCCATCTTGAGTATAAATAT
ATTTAAATCAACAGGTAATATTGATGTTATTGCCAATGTGGTGAAATCCG
AAGTATTCCTCATCCATCTGGTACTAAAATCCCATCCTGATT
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