CF836631

Overview
NameCF836631
Unique NameCF836631
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1895 contig Csv1_Contig1895:316..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF836631 vs. ExPASy Swiss-Prot
Match: ZFP1_WHEAT (Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.330e-22
Identity = 68/169 (40.24%), Postives = 75/169 (44.38%), Query Frame = -2 
Query:  275 FKCSVCDKAFSSYQALGGHKASHR--KGSGGGDEHXXXXXXXXXXXXXXTGV-----------PNATGRTHECSICHKSFPTGQALGGHKRCHYDGG-----------EKXXXXXXXXXXXXXXXXHRDFDLNLPVLPEL------SPAFFFSGDDEVESPLPAKKPRL 691
            FKCSVC K+FSSYQALGGHK SHR  + S   D                                AT R H CSIC K FPTGQALGGHKR HYDGG                              R FDLN+P +PE            +  D+EV+SPL  KKPRL
Sbjct:   90 FKCSVCGKSFSSYQALGGHKTSHRVKQPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASSDGATNRVHRCSICQKEFPTGQALGGHKRKHYDGGVGAAASSTELLAAAAAESEVGSTGNGSSAARAFDLNIPAVPEFVWRPCAKGKMMWEDDEEVQSPLAFKKPRL 258
The following BLAST results are available for this feature:
BLAST of CF836631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ZFP1_WHEAT3.330e-2240.24Zinc finger protein 1 OS=Triticum aestivum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_03E23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836631 ID=CF836631; Name=CF836631; organism=Citrus sinensis; type=EST; length=779bp
TTTTTTTTTTTTTTTTTATAAATAATTTGCGCTTTTTCTTAATTACTCTT
AGTCGAAAAAAATTAATTGAATAAATCACAATCACGAAGTCACAGCTGAG
CAACTGTGAGAATCTCAAATGCTTATGTACACAAAAAAATTAGTCACTGA
CGCAAGTAACAGTAAAGAAATACACGAAATATATTTGCCTAAACTTAACA
TCCTTAAAAGTAGCCCAAAAACAAAAAAAAAGTGGCAATTAAGTAAATTA
AACTTCGATTTTGGGGGGCAAGAAGAGACGCGGCTTCTTCGCCGGCAGTG
GACTCTCCACCTCGTCATCACCAGAGAAGAAGAAAGCAGGGGAGAGCTCC
GGTAAGACAGGGAGGTTGAGGTCAAAGTCACGGTGGCTGACTTGGCTGTG
AGTGCTACTGGACCCGGATGACGTCACTCCGCTCTTCTCGCCGCCATCGT
AGTGACAACGTTTGTGTCCGCCCAAGGCTTGGCCGGTGGGGAAGGACTTG
TGACAGATGGAACACTCGTGGGTCCTACCAGTGGCGTTCGGTACGCCGGT
GGTCGTGGCGGTTGCGTTGGTGTTGGTGGTAGTGGAAGCGGAGTGTTCGT
CGCCGCCCCCAGATCCCTTACGGTGGCTGGCCTTGTGACCACCCAAGGCT
TGGTAAGAAGAAAACGCCTTGTCGCACACGCTGCACTTGAAGACAAGCTT
CTGGTCAGAGGACGACGTCGTTGCAGCAGTAGATGGAGCATGAGACTTCT
GTCGCTGTGAGGCGGTGGTGGTCCTGTTG
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