CF836634

Overview
NameCF836634
Unique NameCF836634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: TIM14_PONAB (Mitochondrial import inner membrane translocase subunit TIM14 OS=Pongo abelii GN=DNAJC19 PE=3 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 3.799e-18
Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 359
            +Y GGF+  MTKREAALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++ G+ K
Sbjct:   49 YYRGGFEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: TIM14_MOUSE (Mitochondrial import inner membrane translocase subunit TIM14 OS=Mus musculus GN=Dnajc19 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 3.799e-18
Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 359
            +Y GGF+  MTKREAALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++ G+ K
Sbjct:   49 YYRGGFEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: TIM14_HUMAN (Mitochondrial import inner membrane translocase subunit TIM14 OS=Homo sapiens GN=DNAJC19 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 3.799e-18
Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 359
            +Y GGF+  MTKREAALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++ G+ K
Sbjct:   49 YYRGGFEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: TIM14_BOVIN (Mitochondrial import inner membrane translocase subunit TIM14 OS=Bos taurus GN=DNAJC19 PE=3 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 4.961e-18
Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 359
            +Y GGF+  MTKREAALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++ G+ K
Sbjct:   49 YYRGGFEPKMTKREAALILGVSPTANKAKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: DJC15_MOUSE (DnaJ homolog subfamily C member 15 OS=Mus musculus GN=Dnajc15 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.485e-17
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 3
Query:   96 RYGIQAWQ-------AXXXXXXXXXXXXFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGS 365
            RY  Q W+       A            +Y+GGF+  M+KREA+LILGV  +A   K++ AH+R+M+ NHPD GGS YLASKINEAKD++   +K +
Sbjct:   53 RYAFQIWKPLEQVITATARKISSPSFSSYYKGGFEQKMSKREASLILGVSPSAGKAKIRTAHKRIMILNHPDKGGSPYLASKINEAKDLLEASSKAN 149          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: TIM14_DANRE (Mitochondrial import inner membrane translocase subunit TIM14 OS=Danio rerio GN=dnajc19 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.357e-17
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 359
            +Y GGF   M +REA+LILGV   A   K++EAHR++M+ NHPD GGS YLA+KINEAKD++ G+ K
Sbjct:   48 YYRGGFDPKMNRREASLILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLDGQAK 114          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: TIM14_CAEEL (Mitochondrial import inner membrane translocase subunit TIM14 OS=Caenorhabditis elegans GN=dnj-21 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVM 344
            +Y GGF   M++ EAA ILGV  +A P K+KEAH++VM+ NHPD GGS YLA+KINEAKD+M
Sbjct:   46 YYRGGFDQKMSRAEAAKILGVAPSAKPAKIKEAHKKVMIVNHPDRGGSPYLAAKINEAKDLM 107          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: TIM14_CAEBR (Mitochondrial import inner membrane translocase subunit TIM14 OS=Caenorhabditis briggsae GN=dnj-21 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVM 344
            +Y GGF   M++ EAA ILG+  +A P K+K+AH++VM+ NHPD GGS YLA+KINEAKD+M
Sbjct:   45 YYRGGFDQKMSRSEAAKILGITPSAKPAKIKDAHKKVMIVNHPDRGGSPYLAAKINEAKDLM 106          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: DJC15_PONAB (DnaJ homolog subfamily C member 15 OS=Pongo abelii GN=DNAJC15 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 359
            +Y+GGF+  M++REA LILGV  +A   K++ AHRRVM+ NHPD GGS Y+A+KINEAKD++   TK
Sbjct:   83 YYKGGFEKKMSRREAGLILGVSPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLETTTK 149          
BLAST of CF836634 vs. ExPASy Swiss-Prot
Match: DJC15_HUMAN (DnaJ homolog subfamily C member 15 OS=Homo sapiens GN=DNAJC15 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 3
Query:  159 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 359
            +Y+GGF+  M++REA LILGV  +A   K++ AHRRVM+ NHPD GGS Y+A+KINEAKD++   TK
Sbjct:   83 YYKGGFEQKMSRREAGLILGVSPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLETTTK 149          
The following BLAST results are available for this feature:
BLAST of CF836634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
TIM14_PONAB3.799e-1861.19Mitochondrial import inner membrane translocase su... [more]
TIM14_MOUSE3.799e-1861.19Mitochondrial import inner membrane translocase su... [more]
TIM14_HUMAN3.799e-1861.19Mitochondrial import inner membrane translocase su... [more]
TIM14_BOVIN4.961e-1861.19Mitochondrial import inner membrane translocase su... [more]
DJC15_MOUSE5.485e-1745.36DnaJ homolog subfamily C member 15 OS=Mus musculus... [more]
TIM14_DANRE9.357e-1758.21Mitochondrial import inner membrane translocase su... [more]
TIM14_CAEEL1.596e-1662.90Mitochondrial import inner membrane translocase su... [more]
TIM14_CAEBR4.644e-1659.68Mitochondrial import inner membrane translocase su... [more]
DJC15_PONAB4.644e-1658.21DnaJ homolog subfamily C member 15 OS=Pongo abelii... [more]
DJC15_HUMAN4.644e-1658.21DnaJ homolog subfamily C member 15 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_03F02_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836634 ID=CF836634; Name=CF836634; organism=Citrus sinensis; type=EST; length=670bp
CTGCTCTTGCTCTAAAGCTCGACAGTCGACGTTTCACATAAATGGCTACA
CCATTTTTGGCTGGGCTTGCAATTGCTGCAGCTGCTCTTGCTGGCAGATA
TGGTATCCAAGCTTGGCAAGCAATCAAGACACGACCACCAAAACCTAAAA
TCCGTAAGTTCTACGAGGGTGGTTTCCAGACTACAATGACAAAAAGGGAA
GCAGCTCTTATTCTTGGCGTTAGGGAAAATGCTACTCCAGACAAAGTCAA
GGAAGCTCATCGGAGAGTAATGGTTGCAAACCATCCTGATGCAGGTGGTA
GCCATTACCTTGCCTCCAAAATCAATGAAGCTAAAGATGTAATGCTCGGA
AAGACAAAGGGCAGCGGATCTGCATTCTGATAACCTTCAAAATGCCAAAG
TCTAGCCAAACTTTGTCCAGGAGAAAACAAGTGTCCGATCCTATGAGGTA
TCTCACTTATAATAAGCAAGGCAGATGCTTGCCAACGAATTGAGGTTTCG
TTGTCGAATATGGGAAGACACCAAATTGTGCCATTCTTTGAATAGAAACT
TTAGAATGGTTGATAATGACGAAATATCGCCTCGCTGCTACAGATACATG
CAAGAGAAATGGGGCAATATAATTATATGCTTAATATATCCCATCACATT
CTTGAAAAAAAAAAAAAAAA
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