CF836678

Overview
NameCF836678
Unique NameCF836678
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.828e-39
Identity = 70/124 (56.45%), Postives = 100/124 (80.65%), Query Frame = -1
Query:   89 AKKQKHFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQPSYVVERVLE 460
            AK+QKHFVLVHG   GAW WYK+KP LE+AGH+VTA+DL+A+GIN +++ ++ +F +Y+EPL+E++AS+  DEKV+L+GHSFGG+S+ LA + +P KISVA+F++A MPD  H  +Y  E+  E
Sbjct:    7 AKQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNE 130          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.029e-35
Identity = 69/121 (57.02%), Postives = 96/121 (79.34%), Query Frame = -1
Query:   83 HFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQPSYVVERVLE*F 445
            HFVL+H   HGAW W+K+KP LEA GH+VTA+DLAASG++ ++I+++ SF EY+EPLL  L +L   EKVILVG S GGL++A+AADK+  KI+ A+F  + +PDT+H PSYVV++++E F
Sbjct:    5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF 125          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 4.322e-34
Identity = 66/121 (54.55%), Postives = 90/121 (74.38%), Query Frame = -1
Query:   83 HFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQPSYVVERVLE*F 445
            HFVL+H   HGAW W+K+KP LE AGH+VTA+D+AASGI+ ++I+ + SF EY+EPLL  L  L   EKVI+VG S  GL++A+AAD++  KI+  +F  + +PDT H PSY VE++LE F
Sbjct:    5 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLLESF 125          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 4.945e-30
Identity = 59/110 (53.64%), Postives = 84/110 (76.36%), Query Frame = -1
Query:  134 AKKQKHFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSA-DEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMP 460
            +  +KHF+LVHG  HGAWCWY+V   L AAGHR TA+D+AASG +  ++ +V +F EY+ PLL+ +A+ +A  E+++LVGHS GGLSVALA ++FP K++ A+F+ A MP
Sbjct:    5 SSSKKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMP 114          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 4.945e-30
Identity = 59/110 (53.64%), Postives = 84/110 (76.36%), Query Frame = -1
Query:  134 AKKQKHFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSA-DEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMP 460
            +  +KHF+LVHG  HGAWCWY+V   L AAGHR TA+D+AASG +  ++ +V +F EY+ PLL+ +A+ +A  E+++LVGHS GGLSVALA ++FP K++ A+F+ A MP
Sbjct:    5 SSSKKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMP 114          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.439e-29
Identity = 57/105 (54.29%), Postives = 78/105 (74.29%), Query Frame = -1
Query:  134 KHFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMP 448
            KHFV VHG  HGAWCWY+V   L AAGHR TA+D+AA+G +  +  +V S  EY+ PLL+ +A+ +  E+++LVGHS GGLS+ALA ++FP K++ A+FL A MP
Sbjct:    6 KHFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMP 110          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.439e-29
Identity = 57/105 (54.29%), Postives = 78/105 (74.29%), Query Frame = -1
Query:  134 KHFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMP 448
            KHFV VHG  HGAWCWY+V   L AAGHR TA+D+AA+G +  +  +V S  EY+ PLL+ +A+ +  E+++LVGHS GGLS+ALA ++FP K++ A+FL A MP
Sbjct:    6 KHFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMP 110          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.055e-24
Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = -1
Query:  116 EKVKKMTEAKKQKHFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQP 484
            ++V   +E+   K FVLVHG   GAWCWYK+   LE +G     +DL   G NM     V +  EY++PL+++L +L  +EKVILVGHS GG S++ A ++FP KIS AIF+ A M     +P
Sbjct:   84 KQVPDFSESLIVKKFVLVHGEGFGAWCWYKMVASLEESGLSPVTVDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRP 206          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.012e-23
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = -1
Query:  137 HFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFM 445
            HFV VHG++HGAWCWYK+   L AAG + T++DL  +GIN+     V  F  YN PL  +L+ L +  K++LVGHS GG SV  A  KF  KIS+ ++L A M
Sbjct:   13 HFVFVHGASHGAWCWYKLTTLLVAAGFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIVLVGHSIGGGSVTEALCKFTDKISMVVYLAADM 115          
BLAST of CF836678 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23
Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = -1
Query:  113 HFVLVHGSNHGAWCWYKVKPRLEAAGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQPS 445
            HFV VHG++HGAWCWYK+   L+AAG + T++DL  +GI++     V    +YN PL  +L+ L    KVILVGHS GG SV  A  KF  KIS+AI+L A M      PS
Sbjct:   12 HFVFVHGASHGAWCWYKLTTLLDAAGFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVILVGHSIGGGSVTEALCKFTDKISMAIYLAASMVQPGSIPS 122          
The following BLAST results are available for this feature:
BLAST of CF836678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PNAE_RAUSE5.828e-3956.45Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
HNL_HEVBR1.029e-3557.02Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
HNL_MANES4.322e-3454.55Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
PIR7B_ORYSJ4.945e-3053.64Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI4.945e-3053.64Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
PIR7A_ORYSJ1.439e-2954.29Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI1.439e-2954.29Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
Y1399_ARATH4.055e-2444.72Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PPD_RAPSA2.012e-2349.51Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PPD_ARATH7.647e-2349.55Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_03G06_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836678 ID=CF836678; Name=CF836678; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTGGGTTGAATTGAAGGAAATGATGGTTGGACACTT
TATATTTTCTCTAAATGAATAAACAATGAAATAAATTATTCTAATACCCG
CTCCACAACATAAGATGGTTGGTGTTTGGTGTCTGGCATGAATGCTGTTA
AGAAAATAGCAACTGAAATTTTGTGTGGGAACTTGTCAGCTGCCAGGGCC
ACACTCAAGCCTCCGAAGCTGTGTCCGACAAGTATGACCTTCTCGTCTGC
TGAAAGTGAGGCCAAAATCTCCAACAAAGGCTCATTGTATTCATAAAATG
AACGAACATCCTGGATTTTCTTCATGTTGATGCCGGAGGCTGCAAGGTCC
ATCGCCGTCACCCGGTGACCGGCTGCCTCCAGCCGTGGCTTCACCTTATA
CCAGCACCAAGCTCCATGGTTTGATCCATGCACTAGAACAAAATGCTTTT
GCTTCTTGGCTTCTGTCATTTTCTTAACTTTCTCTGTTAGTTCCATTTAT
GTGCGTGCCTTATTGTGCGCTTTATAGATAGATTTCTTTTGTGCGTGTGC
CCTATTGTGCTCTTTGTATAGATATCTACTCTCCAATAATTCTCTAGTTG
TGTTTATTCTGTTTGAACATAA
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