CF836684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 7.000e-61 Identity = 117/135 (86.67%), Postives = 122/135 (90.37%), Query Frame = 3 Query: 6 MVHIKKPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 MV KPNKAVILLQG YAG+KAVIVK+FDDGTRE+ YGHCLVAGIKK+P KVI+KDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKD V D LQSKDKKVTA KETKK L ERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.490e-58 Identity = 110/135 (81.48%), Postives = 119/135 (88.15%), Query Frame = 3 Query: 6 MVHIKKPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 MV K NKAVILLQG YAG+KAVI+KSFDDG R+R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+LQSKDKKV A KE K +L ERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.490e-58 Identity = 110/135 (81.48%), Postives = 120/135 (88.89%), Query Frame = 3 Query: 6 MVHIKKPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 MV K NKAVILLQG YAG+KAVI+KSFDDGT +R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+L+SKDKKVTA KE K +L ERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 8.010e-57 Identity = 107/135 (79.26%), Postives = 118/135 (87.41%), Query Frame = 3 Query: 6 MVHIKKPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 MV KP KAVILLQG Y G+KAVIVKSFDDGT E+ YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VVSAD++ SKDKKVTA KE K + ERFKTGKNRWFFTKLRF Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.414e-53 Identity = 106/134 (79.10%), Postives = 117/134 (87.31%), Query Frame = 3 Query: 21 KPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL----KDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 KPNKAVILLQG YAGRKAVIV++FD+GTR+R YGHCLVAGI +YP KVIRKDSAKK KKSRVKAF+KLVNY H+MPTRYTLD DL KDVV+AD LQ++DKKVTA + TK RL ERFKTGKNRWFFTKLRF Sbjct: 6 KPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40 Identity = 83/135 (61.48%), Postives = 101/135 (74.81%), Query Frame = 3 Query: 6 MVHIKKPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 MV K K V++L G +AG+KAVIV++FDDGT R YGH LV G++K P KV ++ S KK AKKS +K F+K VNY HLMPTRYTLDVD K V+A++ ++ KKV A KE KK L E+FKTGKNRWFFTKLRF Sbjct: 1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFKG-VAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35 Identity = 75/131 (57.25%), Postives = 93/131 (70.99%), Query Frame = 3 Query: 21 KPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 KP K V++L G YAGRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + ER+KTGKN+WFF KLRF Sbjct: 6 KPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.268e-35 Identity = 75/131 (57.25%), Postives = 93/131 (70.99%), Query Frame = 3 Query: 21 KPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 KP K V++L G YAGRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + ER+KTGKN+WFF KLRF Sbjct: 6 KPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL27_ICTPU (60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 5.052e-35 Identity = 73/131 (55.73%), Postives = 93/131 (70.99%), Query Frame = 3 Query: 21 KPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 KP K V++L G YAGRKAVIVK+ DDGT +R Y H LV+GI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K +V+ D + K A +E K + ER+KTGKN+WFF KLRF Sbjct: 6 KPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF836684 vs. ExPASy Swiss-Prot
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 73/131 (55.73%), Postives = 93/131 (70.99%), Query Frame = 3 Query: 21 KPNKAVILLQGPYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRL*ERFKTGKNRWFFTKLRF 410 KP K V++L G Y+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + ER+KTGKN+WFF KLRF Sbjct: 6 KPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136 The following BLAST results are available for this feature:
BLAST of CF836684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836684 ID=CF836684; Name=CF836684; organism=Citrus sinensis; type=EST; length=620bpback to top |