CF836685

Overview
NameCF836685
Unique NameCF836685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836685 vs. ExPASy Swiss-Prot
Match: IPT9_ARATH (tRNA isopentenyltransferase 9 OS=Arabidopsis thaliana GN=IPT9 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.674e-48
Identity = 91/152 (59.87%), Postives = 115/152 (75.66%), Query Frame = -1 
Query:  347 GSDGILSEAAWLLDEGLLPNSNSATRAIGYRQAMEYLLRCRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLTWFRNERIYHWLNAARPLENVLNYIITAYHDSTGTLVVPDYLQIXXXXXXXREVSELKSYRTRNRHFISRGDCCNILDWIK 802
            G +G+LSEA WLLD GLLPNSN ATRAIGYRQAMEYLL+CR+  G SS  EFYAFL +FQ ASRNFAKRQ+TWFR E +YHWLNA++PL+++L  I  AY      + +P+ L++       RE SELK YR++NRHF+ R DC ++L+WI+
Sbjct:  296 GPNGVLSEARWLLDLGLLPNSNPATRAIGYRQAMEYLLQCRRYEGESSPREFYAFLNKFQTASRNFAKRQMTWFRCEPMYHWLNASKPLDSILQCIYDAYESEAEMVEIPESLRMSKDVRDSREASELKGYRSKNRHFVRREDCSSVLEWIR 447
The following BLAST results are available for this feature:
BLAST of CF836685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IPT9_ARATH1.674e-4859.87tRNA isopentenyltransferase 9 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_03G10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836685 ID=CF836685; Name=CF836685; organism=Citrus sinensis; type=EST; length=802bp
TTTTTTTTTTTTTTTACTCAAATGATTATTTAATAAGCAAAACAAACCTT
GCAAATCTGTTTGTGCACCAAAACACCTTTACATATTCAAGTTACCTGAC
CTTCCTAGAGCAATCAATATGGTATAATTTTCCTGTCTCTCACTTTTTGC
AGATCAGGTGAGCAATTATGGGTATTTATATTCCAATTTAATTCGATATG
AAGAATTGCATTGGATTGGAAGTTTTGGAATCCACAATCGGCAGATCAAT
TTGTTCACCACAGGGTACAATGCAGCTCCTTGCTCTGAACATAAATGCTC
AAACTACGATTGGTTCACGGAGTTCACAAGTTTCGCCTTGAGTTCTCTTT
ATCCAGTCTAGAATATTACAGCAATCTCCACGGCTAATAAAATGCCTGTT
TCTGGTGCGGTACGACTTAAGTTCAGAGACTTCACGACTGCTTGATGAAT
CTCTTCTTATTTGAAGATAATCAGGCACAACCAAAGTTCCAGTTGAATCA
TGATATGCAGTAATGATGTAATTGAGCACATTTTCCAGCGGTCTAGCAGC
ATTAAGCCAGTGATATATACGTTCATTACGGAACCATGTCAGTTGCCTTT
TGGCAAAGTTTCTTGACGCTTTCTGAAATTCTGCCAGAAAAGCATAAAAT
TCCCCTGTAGAACTTGTACCCCCTTGCTGTCTGCATCTTAAGAGGTATTC
CATAGCTTGTCTATAACCAATTGCTCGAGTTGCAGAGTTTGAATTAGGAA
GAAGACCTTCATCAAGAAGCCATGCGGCCTCAGACAAAATCCCATCACTT
CC
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