CF836722

Overview
NameCF836722
Unique NameCF836722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4678 contig Csv1_Contig4678:210..1028. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 1.063e-85
Identity = 155/200 (77.50%), Postives = 166/200 (83.00%), Query Frame = -2
Query:  229 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 828
            TK GGPFGT++  AE AH ANNGLDIAVRLLEP KEQFP +SYAD YQLAGVV VE+TGGP++PFHPGR+DK EPP EGRLPDA +G+DHLR VFG  MGLSD+DIVALSGGHT+G  HKERSGFEGPWT NPLIFDNSYFTELLTGEKDGLLQLPSDKALL D VFRPLVEK              AHLKLSELGFAEA
Sbjct:   51 TKTGGPFGTIKHQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 250          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.814e-85
Identity = 153/200 (76.50%), Postives = 169/200 (84.50%), Query Frame = -2
Query:  229 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 828
            +K GGPFGTM+  AE +H+AN GLDIAVR+LEP KE+ PTISYAD YQLAGVV VEV+GGP +PFHPGR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DP FRPLVEK              AHLKLSELGFA+A
Sbjct:   51 SKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.536e-84
Identity = 152/200 (76.00%), Postives = 168/200 (84.00%), Query Frame = -2
Query:  229 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 828
            +K GGPFGTM+  AE +H+AN GLDIAVR+LEP KE+ PTISYAD YQLAGVV VEV+GGP +PFHPGR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DP F PLVEK              AHLKLSELGFA+A
Sbjct:   51 SKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.006e-84
Identity = 151/199 (75.88%), Postives = 166/199 (83.42%), Query Frame = -2
Query:  232 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAE 828
            ++ GGPFGTM+   EQ+H+AN GLDIAVRLL+P K+Q P +SYAD YQLAGVV VEVTGGP++PFHPGR DK EPP EGRLPDA QG+DHLRQVF AQMGLSDKDIVALSGGHTLGRCHKERSGFEG WT NPLIFDNSYFTEL++GEK+GLLQLPSDKAL+ DP FRPLVEK              AHLKLSELGFAE
Sbjct:   52 SRTGGPFGTMKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYQLAGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 1.101e-82
Identity = 149/200 (74.50%), Postives = 166/200 (83.00%), Query Frame = -2
Query:  229 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 828
            ++ GGPFGTMR  AEQAH AN+G+ IA+RLL+P +EQFPTIS+AD +QLAGVV VEVTGGPDIPFHPGR+DK +PP EGRLPDA +G DHLR VF  QMGLSDKDIVALSG HTLGRCHK+RSGFEG WT NPLIFDNSYF ELL+GEK+GLLQL SDKALLDDPVFRPLVEK              AH+KLSELGFA+A
Sbjct:   51 SRTGGPFGTMRFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 250          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 296.59 bits (758), Expect = 1.139e-79
Identity = 147/199 (73.87%), Postives = 161/199 (80.90%), Query Frame = -2
Query:  232 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAE 828
            TK GGPFGT+R   E AH ANNGLDIAVRLL+P KE FP +SYAD YQLAGVV VE+TGGP+IPFHPGR DK EPP EGRLP A +G DHLR VFG +MGL+DKDIVALSGGHTLGRCHKERSGFEG WT NPLIFDNSYF E+L+GEK+GLLQLP+DKALLDDP+F P VEK              AHLKLSELGFA+
Sbjct:   52 TKTGGPFGTIRHPQELAHDANNGLDIAVRLLDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFG-RMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.416e-63
Identity = 126/197 (63.96%), Postives = 142/197 (72.08%), Query Frame = -2
Query:  238 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 828
            +K GGP G++R   E  H AN+GL IA+ L E  K + P I+YADLYQLAGVV VEVTGGPDI F PGR D    P+EGRLPDAKQG  HLR VF  +MGLSDKDIVALSGGHTLGR H ERSGF+GPWT+ PL FDNSYF ELL GE +GLL+LP+DK LL+DP FR LVE               +H KLSELGF
Sbjct:   49 SKTGGPNGSIRNEEEHTHGANSGLKIALDLCEGVKAKHPKITYADLYQLAGVVAVEVTGGPDIVFVPGRKDSNVCPKEGRLPDAKQGFQHLRDVF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.386e-61
Identity = 119/197 (60.41%), Postives = 145/197 (73.60%), Query Frame = -2
Query:  238 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 828
            TK GGP G++R   E +H+AN G+ IA+ LLEP K++ P I+YADLYQLAGVV VEVTGGP I + PGR D ++ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE               +H KLSELGF
Sbjct:   50 TKTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQKHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.386e-61
Identity = 119/197 (60.41%), Postives = 145/197 (73.60%), Query Frame = -2
Query:  238 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 828
            TK GGP G++R   E +H+AN G+ IA+ LLEP K++ P I+YADLYQLAGVV VEVTGGP I + PGR D ++ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE               +H KLSELGF
Sbjct:   50 TKTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQRHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF836722 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.315e-61
Identity = 122/197 (61.93%), Postives = 141/197 (71.57%), Query Frame = -2
Query:  238 TKPGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 828
            TK GG  G++R   E  H +N GL IA+ LLEP K + P I+YADLYQLAGVV VEVTGGP + F PGR D +  P+EGRLPDAK+G  HLR +F  +MGLSDKDIVALSGGHTLGR H ERSGFEG WT+ PL FDNSYF ELL GE +GLL+LP+DKALL+DP FR  V+               +H KLSELGF
Sbjct:   49 TKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVAVEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
The following BLAST results are available for this feature:
BLAST of CF836722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
APX1_PEA1.063e-8577.50L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ORYSJ1.814e-8576.50L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI1.536e-8476.00L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ORYSJ2.006e-8475.88L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_ARATH1.101e-8274.50L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ARATH1.139e-7973.87L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX3_ARATH7.416e-6363.96L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX3_ORYSJ2.386e-6160.41Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI2.386e-6160.41Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX4_ORYSJ5.315e-6161.93Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_03H09_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836722 ID=CF836722; Name=CF836722; organism=Citrus sinensis; type=EST; length=829bp
TTTTTTTTTTTTAGTCTGAAAACAGTTGATATTATTAGTTCTAACGGATG
ATAGTAACCATAGTATTCGACCCAACTTTTCACAATCCACCATGTGCAAC
AAAACAAAACCACAAAATTCCACCAACAACATCTTGAAATTCGAATTTTC
TGAGAATTCAAAAAACATAAAATAGAGGCACACTGTTGTTGGCATCATTC
CAACCATTTATTTACTCAGGTAAATTTAGGCTTCAGCAAATCCTAGCTCA
GAGAGCTTGAGATGAGCCTCAGCATAATCAGCGAAGAAAGCGTCCTCATC
CGCAGCATATTTCTCAACAAGAGGGCGGAAAACAGGGTCATCCAGAAGGG
CCTTGTCGGATGGCAATTGCAGAAGACCATCCTTCTCACCAGTCAAGAGC
TCCGTGAAGTAGGAATTGTCAAAAATGAGAGGGTTGCGGGTCCATGGTCC
CTCAAATCCAGACCTCTCCTTGTGGCACCTTCCCAGGGTGTGGCCACCAG
AGAGAGCAACAATATCCTTGTCGCTGAGGCCCATCTGAGCACCAAAGACT
TGCCTCAAGTGATCATTACCCTGTTTAGCATCAGGAAGCCGGCCTTCTTG
AGGTGGCTCAGCCTTGTCATCTCTTCCAGGGTGGAAGGGGATATCGGGCC
CACCGGTAACCTCAACGCCAACAACACCAGCAAGCTGATAAAGGTCAGCG
TAGGAGATGGTAGGGAACTGCTCCTTGAACGGCTCCAAAAGCCTAACGGC
AATATCGAGGCCGTTGTTGGCTGAGTGTGCCTGCTCAGCAGCGAGCCTCA
TGGTTCCGAATGGACCTCCGGGCTTGGTC
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