CF836736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836736 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 4.056e-34 Identity = 76/180 (42.22%), Postives = 115/180 (63.89%), Query Frame = -2 Query: 274 KQILRYLKGTIFHGLHLRSSQS--HSLIAYSNSDWGGNLDDRSSTSAYVI-YFGGNSISWSSKKQRSVARSSTEAEFRAIAAAVSEICWIRNLLGELGINFSMPI-LHCDNLGATYLCSNPIYHLKMKHVEIDFYFARDKIAAGLLCVSHIPSEN*LADTLTKPLSRNRYIAARSKLGVL 801 K++LRYLKGTI L + + + + +I Y +SDW G+ DR ST+ Y+ F N I W++K+Q SVA SSTEAE+ A+ AV E W++ LL + I PI ++ DN G + +NP H + KH++I ++FAR+++ ++C+ +IP+EN LAD TKPL R++ R KLG+L Sbjct: 1222 KRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLL 1401
BLAST of CF836736 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.442e-25 Identity = 62/177 (35.03%), Postives = 102/177 (57.63%), Query Frame = -2 Query: 277 AAKQILRYLKGTIFHGLHLRSSQSHSLIAYSNSDWGGNLDDRSSTSAYVIYFGGNSISWSSKKQRSVARSSTEAEFRAIAAAVSEICWIRNLLGELGINFSMPILHCDNLGATYLCSNPIYHLKMKHVEIDFYFARDKIAAGLLCVSHIPSEN*LADTLTKPLSRNRYIAARSKLGV 807 A K ILRYL+GT L S L Y+++D G++D+R S++ Y+ F G +ISW SK Q+ VA S+TEAE+ A E+ W++ L ELG++ +++CD+ A L N +YH + KH+++ +++ R+ + L V I + AD LTK + RN++ + +G+ Sbjct: 1150 AVKWILRYLRGTTGDCLCFGGSDP-ILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325
BLAST of CF836736 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.120e-18 Identity = 40/86 (46.51%), Postives = 61/86 (70.93%), Query Frame = -2 Query: 544 KQILRYLKGTIFHGLHLRSSQSHSLIAYSNSDWGGNLDDRSSTSAYVIYFGGNSISWSSKKQRSVARSSTEAEFRAIAAAVSEICW 801 K++LRY+KGTIFHGL++ + ++ A+ +SDW G R ST+ + + G N ISWS+K+Q +V+RSSTE E+RA+A +E+ W Sbjct: 140 KRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225 The following BLAST results are available for this feature:
BLAST of CF836736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836736 ID=CF836736; Name=CF836736; organism=Citrus sinensis; type=EST; length=808bpback to top |