CF836738
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836738 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 2.113e-36 Identity = 81/198 (40.91%), Postives = 124/198 (62.63%), Query Frame = -1 Query: 273 NKLSQFMRQPSQIHWQAAKQILRYLKGTIFHGLHLRSSQS--HSLIAYSNSDWGGNLDDRSSTSAYVI-YFGGNSISWSSKKQRSVARSSTEAEFRAIAAAVSEICWIRNLLGELGINFSMPI-LHCDNLGATYLCSNPIYHLKMKHVEIDFYFARDKIAAGLLCVSHIPSEN*LADTLTKPLSRNRYIAARSKLGVL 854 N LS++ + + WQ K++LRYLKGTI L + + + + +I Y +SDW G+ DR ST+ Y+ F N I W++K+Q SVA SSTEAE+ A+ AV E W++ LL + I PI ++ DN G + +NP H + KH++I ++FAR+++ ++C+ +IP+EN LAD TKPL R++ R KLG+L Sbjct: 1204 NILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLL 1401
BLAST of CF836738 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.599e-30 Identity = 67/191 (35.08%), Postives = 112/191 (58.64%), Query Frame = -1 Query: 276 LSQFMRQPSQIHWQAAKQILRYLKGTIFHGLHLRSSQSHSLIAYSNSDWGGNLDDRSSTSAYVIYFGGNSISWSSKKQRSVARSSTEAEFRAIAAAVSEICWIRNLLGELGINFSMPILHCDNLGATYLCSNPIYHLKMKHVEIDFYFARDKIAAGLLCVSHIPSEN*LADTLTKPLSRNRYIAARSKLGV 848 +S+F+ P + HW+A K ILRYL+GT L S L Y+++D G++D+R S++ Y+ F G +ISW SK Q+ VA S+TEAE+ A E+ W++ L ELG++ +++CD+ A L N +YH + KH+++ +++ R+ + L V I + AD LTK + RN++ + +G+ Sbjct: 1136 VSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDP-ILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325
BLAST of CF836738 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.177e-20 Identity = 44/104 (42.31%), Postives = 69/104 (66.35%), Query Frame = -1 Query: 543 NKLSQFMRQPSQIHWQAAKQILRYLKGTIFHGLHLRSSQSHSLIAYSNSDWGGNLDDRSSTSAYVIYFGGNSISWSSKKQRSVARSSTEAEFRAIAAAVSEICW 854 N + Q M +P+ + K++LRY+KGTIFHGL++ + ++ A+ +SDW G R ST+ + + G N ISWS+K+Q +V+RSSTE E+RA+A +E+ W Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225 The following BLAST results are available for this feature:
BLAST of CF836738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836738 ID=CF836738; Name=CF836738; organism=Citrus sinensis; type=EST; length=854bpback to top |