CF836744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: TM1L2_MOUSE (TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.192e-22 Identity = 63/169 (37.28%), Postives = 98/169 (57.99%), Query Frame = 2 Query: 227 PVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAAER-----VLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETEVDATL 715 PV + +E AT +L+ DW +N+++CD+IN + D IR +KKR+ ++ R LAL +LET VKNC F + A R VL +++ ++P T+V ++K L +I+AW ++ L Y+ L+ RGI FP D ++L+PI TP RSV E + AT+ Sbjct: 12 PVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLSGNRNYREVMLALTVLETCVKNCGHRFHLLVANRDFIDSVLVKIISPKNNPPTIV--QDKVLALIQAWADAFRSSPDLTGVVHIYEELKRRGIEFPMADLDALSPIHTPQRSVPEMDPAATI 178
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: TM1L2_HUMAN (TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.286e-22 Identity = 61/169 (36.09%), Postives = 98/169 (57.99%), Query Frame = 2 Query: 227 PVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAAER-----VLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETEVDATL 715 PV + +E AT +L+ DW +N+++CD+IN + D IR +KKR+ ++ R LAL +LET VKNC F + A R VL +++ ++P T+V ++K L +I+AW ++ L Y+ L+ +G+ FP D ++L+PI TP RSV E + AT+ Sbjct: 12 PVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIV--QDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATM 178
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: TOM1_MOUSE (Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.987e-20 Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 224 NPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAA-----ERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETE 700 +PV + +E AT +L+ DWA+N+++CD+IN + D R +KKRIM K+ LAL +LET VKNC F + A E VL + ++P T+V+ +K L +I++W ++ L Y+ LR +G+ FP D + L+PI TP R+V +E Sbjct: 11 SPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIMGNKNFHEVMLALTVLETCVKNCGHRFHVLVANQDFVENVLVRTILPKNNPPTIVH--DKVLNLIQSWADAFRSSPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSE 173
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: TOM1_HUMAN (Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.902e-20 Identity = 63/185 (34.05%), Postives = 102/185 (55.14%), Query Frame = 2 Query: 224 NPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAA-----ERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETEV----DATLAEQIQRDIRGQ 748 +PV + +E AT +L+ DWA+N+++CD+IN + D +R +KKRI+ K+ LAL +LET VKNC F + A E VL + ++P T+V+ +K L +I++W ++ L Y+ LR +G+ FP D + L+PI TP R+V +E D+ + Q++ GQ Sbjct: 11 SPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVH--DKVLNLIQSWADAFRSSPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETQSGQDSVGTDSSQQEDSGQ 193
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: TM1L2_XENLA (TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.902e-20 Identity = 57/164 (34.76%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 227 PVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAAER-----VLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETE 700 PV + +E AT +L+ DW +N+++CD+IN + D +R +KKR+ ++ R LAL +LET VKNC F R +L +++ ++P T+V ++K L +I+AW ++ L Y+ L+ +GI FP D ++L+PI TP RSV E + Sbjct: 12 PVGQCIEKATDGSLQSEDWTLNMEICDIINETEEGPKDAMRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHVQVTHRDFIDGILVKIISPKNNPPTIV--QDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGIEFPMADLDALSPIHTPQRSVPEVD 173
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: TOM1_CHICK (Target of Myb protein 1 OS=Gallus gallus GN=TOM1 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.796e-18 Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 224 NPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAF-----SEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSV 688 +PV + +E AT +L DW++N+++CD+IN + D R IKKRI+ K+ LAL +LET VKNC F S+ E VL + ++P +V+ +K L +I++W ++ L Y+ LR +G+ FP D + L+PI TP RSV Sbjct: 11 SPVGQRIERATDGSLRGEDWSLNMEICDIINETEEGPKDAFRAIKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHILVASQDFVESVLVRTILPKNNPPAIVH--DKVLTLIQSWADAFRSSPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPRRSV 169
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: HGS_RAT (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus GN=Hgs PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.617e-16 Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 215 QGPNPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIMLKSPRIQYLALVLLETVVKNC-EKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFP 637 +G E+L++ ATS+ L E DW L +CD+I + + IKK++ K+P + AL ++E+VVKNC + EVA ++ ++E+ +L+ Q VN RNK L +I+AW + V ++TY+ ++ G FP Sbjct: 3 RGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKR-QVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP 143
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: HGS_MOUSE (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus GN=Hgs PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.617e-16 Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 215 QGPNPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIMLKSPRIQYLALVLLETVVKNC-EKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFP 637 +G E+L++ ATS+ L E DW L +CD+I + + IKK++ K+P + AL ++E+VVKNC + EVA ++ ++E+ +L+ Q VN RNK L +I+AW + V ++TY+ ++ G FP Sbjct: 3 RGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKR-QVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP 143
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: HGS_HUMAN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Homo sapiens GN=HGS PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16 Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 215 QGPNPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIMLKSPRIQYLALVLLETVVKNC-EKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFP 637 +G E+L++ ATS+ L E DW L +CD+I + + IKK++ K+P + AL ++E+VVKNC + EVA ++ ++E+ L+ Q VN RNK L +I+AW + V ++TY+ ++ G FP Sbjct: 3 RGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKR-QVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP 143
BLAST of CF836744 vs. ExPASy Swiss-Prot
Match: HGS_BOVIN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos taurus GN=HGS PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.830e-16 Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 215 QGPNPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIMLKSPRIQYLALVLLETVVKNC-EKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFP 637 +G E+L++ ATS+ L E DW L +CD+I + + IKK++ K+P + AL ++E+VVKNC + EVA ++ ++E+ L+ Q VN RNK L +I+AW + V ++TY+ ++ G FP Sbjct: 3 RGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVSSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKR-QVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP 143 The following BLAST results are available for this feature:
BLAST of CF836744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836744 ID=CF836744; Name=CF836744; organism=Citrus sinensis; type=EST; length=892bpback to top |