CF836766

Overview
NameCF836766
Unique NameCF836766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length411
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig269 contig Csv1_Contig269:2..412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 9.075e-57
Identity = 112/135 (82.96%), Postives = 119/135 (88.15%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGEEDCVGS--KIEGSRLKFVDRHIRQQRALQQLGMIQH---NAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            SSFEQAAGI SAK+Y +LALKTIS+QFRCLK+AI GQIKAANK LGEED V    + EGSRLKFVD H+RQQRALQQLGMIQH   NAWRPQRGLPER+VSV RAWLFEHFLHPYPKDSDK MLAKQTGLTRSQV
Sbjct:  298 SSFEQAAGIGSAKSYTSLALKTISRQFRCLKEAIAGQIKAANKSLGEEDSVSGVGRFEGSRLKFVDHHLRQQRALQQLGMIQHPSNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQV 432          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH7_ARATH (BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana GN=BLH7 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 5.910e-40
Identity = 84/132 (63.64%), Postives = 100/132 (75.76%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGEED--CVGSKIEGSRLKFVDRHIRQQRALQQLGMIQHNAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            SSF+  AG  +AK Y ALAL+TIS+ FRCL+DAI GQI    K LG E     G  +  SRL+ VD+ +RQQRALQ+LG++Q + WRPQRGLP+ SV V RAWLFEHFLHPYPKDSDK MLA+QTGL+R QV
Sbjct:  201 SSFDVIAGCGAAKPYTALALQTISRHFRCLRDAISGQILVIRKSLGGEQDGSDGRGVGISRLRNVDQQVRQQRALQRLGVMQPHTWRPQRGLPDSSVLVLRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQV 332          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH6_ARATH (BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana GN=BLH6 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.609e-37
Identity = 84/133 (63.16%), Postives = 97/133 (72.93%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGEE-DCVGSKIEG--SRLKFVDRHIRQQRALQQLGMIQHNAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            SSF+  AG  +AK Y ALAL+TIS+ FR L+DAI GQI    K LGE+ D    K  G  SRLK+VD+H+RQQR     G +Q  AWRPQRGLPE SV + RAWLFEHFLHPYPKDSDK MLA+QTGL+R QV
Sbjct:  234 SSFDVIAGYGAAKPYTALALQTISRHFRSLRDAISGQILVLRKCLGEQQDGSDGKRVGIISRLKYVDQHLRQQR-----GFMQPQAWRPQRGLPENSVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQV 361          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 3.964e-36
Identity = 70/136 (51.47%), Postives = 100/136 (73.53%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGEEDCVGS------KIEGSRLKFVDRHIRQQRALQQLGMIQHNAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            +SF+Q  G  +A  Y  LA K +S+ FRCLKDA+  Q+K + ++LG+++  G+      K E  RL+ +++ +RQQRA   +GM++  AWRPQRGLPERSV++ RAWLFEHFL+PYP D+DK +LA+QTGL+R+QV
Sbjct:  336 NSFDQVMGYGAAVPYTTLAQKAMSRHFRCLKDAVAVQLKRSCELLGDKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQV 471          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.177e-36
Identity = 77/132 (58.33%), Postives = 100/132 (75.76%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGEEDCVGSKIEG-SRLKFVDRHIRQQRAL-QQLGMIQHNAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            SSFE   G+ +AK Y ++AL  IS+ FRCL+DAI  QI+     LGE +    + E   RL+++D+ +RQQRAL QQLGM++  AWRPQRGLPE SVS+ RAWLFEHFLHPYPK+S+K ML+KQTGL+++QV
Sbjct:  263 SSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAIKEQIQVIRGKLGERETSDEQGERIPRLRYLDQRLRQQRALHQQLGMVRP-AWRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQV 393          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana GN=BLH10 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.153e-35
Identity = 81/137 (59.12%), Postives = 103/137 (75.18%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGE------EDCVGSKIEGSRLKFVDRHIRQQRAL-QQLGMIQHNAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            SSFE  AG+ SAK Y ++AL  IS+ FR L+DAI  QI+   + LGE      ++  G +I   RL+++D+ +RQQRAL QQLGM++  AWRPQRGLPE SVSV RAWLFEHFLHPYPK+S+K MLAKQTGL+++QV
Sbjct:  265 SSFEIVAGLGSAKPYTSVALNRISRHFRALRDAIKEQIQIVREKLGEKGGESLDEQQGERIP--RLRYLDQRLRQQRALHQQLGMVRP-AWRPQRGLPENSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQV 398          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 1.506e-35
Identity = 73/136 (53.68%), Postives = 99/136 (72.79%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGEEDCVG------SKIEGSRLKFVDRHIRQQRALQQLGMIQHNAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            +SF+   G  +A  Y ALA K +S+ FRCLKDA+  Q+K + ++LG++D  G      +K E  RL+ +++ +RQ RA  Q+GM Q  AWRPQRGLPERSV++ RAWLFEHFLHPYP D+DK +LA+QTGL+R+QV
Sbjct:  410 NSFDIVMGHGAALPYTALAQKAMSRHFRCLKDAVAAQLKQSCELLGDKDAAGISSSGLTKGETPRLRLLEQSLRQNRAFHQMGMEQE-AWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQV 544          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BEL1_ARATH (Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 4.383e-35
Identity = 68/136 (50.00%), Postives = 99/136 (72.79%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGEED------CVGSKIEGSRLKFVDRHIRQQRALQQLGMIQHNAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            ++FE A G+  A+ Y ALA + +S+ FRCLKD + GQI+A ++ LGE +       + ++ E  RL+ +D+ +RQQ++ +Q+ ++  + WRPQRGLPER+V+  RAWLFEHFLHPYP D DK +LA+QTGL+RSQV
Sbjct:  303 AAFEAAVGLGGAEIYTALASRAMSRHFRCLKDGLVGQIQATSQALGEREEDNRAVSIAARGETPRLRLLDQALRQQKSYRQMTLVDAHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQV 438          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH5_ARATH (BEL1-like homeodomain protein 5 OS=Arabidopsis thaliana GN=BLH5 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.102e-33
Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = -2
Query:   21 SSFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAANKMLGEEDCVGSKIEGSRLKFVDRHIRQQRALQQLGMIQH---NAWRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 410
            SSFEQAAG+ SA +Y  +AL+TISKQFR +KD I  QIK  NK+LG+++                       L++LG + H   NAWRPQRGLPE+ VSV R+WLFEHFLHPYP+D DK MLAKQTGLT+SQV
Sbjct:  162 SSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQKEF-------------------DEQLKKLGKMAHHHSNAWRPQRGLPEKVVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQV 275          
BLAST of CF836766 vs. ExPASy Swiss-Prot
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.393e-27
Identity = 69/138 (50.00%), Postives = 91/138 (65.94%), Query Frame = -2
Query:   21 SFEQAAGIESAKAYPALALKTISKQFRCLKDAIPGQIKAA--NKMLGEEDC---VGSKIEGSRLKF--VDRHIRQQRALQQLGMIQHNA--WRPQRGLPERSVSVFRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQV 407
            SFE  AG+  A  Y  LALK +SK F+CLK+AI  Q++ +  NK+  ++ C   + S+ +   L+F   D       A Q+ G   H+A  WRP RGLPER+V+V RAWLF+HFLHPYP D+DK MLAKQTGL+R+QV
Sbjct:  258 SFECVAGLGHAAPYANLALKALSKHFKCLKNAITDQLQFSHNNKIQQQQQCGHPMNSENKTDSLRFGGSDSSRGLCSAGQRHGFPDHHAPVWRPHRGLPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQV 395          
The following BLAST results are available for this feature:
BLAST of CF836766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
BLH1_ARATH9.075e-5782.96BEL1-like homeodomain protein 1 OS=Arabidopsis tha... [more]
BLH7_ARATH5.910e-4063.64BEL1-like homeodomain protein 7 OS=Arabidopsis tha... [more]
BLH6_ARATH1.609e-3763.16BEL1-like homeodomain protein 6 OS=Arabidopsis tha... [more]
BLH4_ARATH3.964e-3651.47BEL1-like homeodomain protein 4 OS=Arabidopsis tha... [more]
BLH3_ARATH5.177e-3658.33BEL1-like homeodomain protein 3 OS=Arabidopsis tha... [more]
BLH10_ARATH1.153e-3559.12BEL1-like homeodomain protein 10 OS=Arabidopsis th... [more]
BLH2_ARATH1.506e-3553.68BEL1-like homeodomain protein 2 OS=Arabidopsis tha... [more]
BEL1_ARATH4.383e-3550.00Homeobox protein BEL1 homolog OS=Arabidopsis thali... [more]
BLH5_ARATH4.102e-3356.39BEL1-like homeodomain protein 5 OS=Arabidopsis tha... [more]
BLH9_ARATH4.393e-2750.00BEL1-like homeodomain protein 9 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_03I17_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03I17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836766 ID=CF836766; Name=CF836766; organism=Citrus sinensis; type=EST; length=411bp
TTTTTTTTTTTTTTTAATTTTACCTGGCTCCTGGTAAGCCCTGTTTGTTT
TGCCAGCATCTGCTTGTCCGAATCTTTCGGATACGGGTGAAGGAAGTGTT
CGAAGAGCCAAGCGCGAAAAACTGAGACAGATCTTTCAGGCAATCCTCTT
TGGGGTCTCCAAGCATTGTGCTGGATCATTCCCAATTGTTGAAGAGCCCT
TTGTTGACGAATATGGCGGTCGACAAATTTGAGCCTGGAGCCTTCAATCT
TGCTCCCGACGCAATCCTCCTCACCCAGCATCTTATTTGCCGCTTTAATT
TGGCCTGGAATTGCATCTTTCAAGCACCGGAATTGCTTTGAAATTGTCTT
GAGAGCAAGTGCTGGGTATGCCTTTGCTGACTCAATTCCTGCTGCTTGTT
CAAATGATGAG
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