CF837262

Overview
NameCF837262
Unique NameCF837262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF837262 vs. ExPASy Swiss-Prot
Match: FBW2_ARATH (F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.886e-46
Identity = 91/131 (69.47%), Postives = 109/131 (83.21%), Query Frame = 2 
Query:  233 MEGESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRC-QPDHLNRMVEMLITRRSGSLRKLCVSGLHNDMMFSLIAQNAGSLQTLRLPRSEMSDSIVAQIAGRLS 622
            ME + EFRHWDELIPDALGLIF +L LQEVLTV+P VCK+W RAV GPYCWQEIDIE WSNR  Q DHL+RM+EMLI R +GSLRKL V+GL ND +FS IAQ+AGSL+TL++PRS +++S V  +A +LS
Sbjct:    1 MEEDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSGVVNVAEKLS 131
The following BLAST results are available for this feature:
BLAST of CF837262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBW2_ARATH2.886e-4669.47F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_04F23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04F23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF837262 ID=CF837262; Name=CF837262; organism=Citrus sinensis; type=EST; length=624bp
GTTGTTTTTACTCTTGTTCCTTTGTTCTTGATGTTGGTTGCATTGATACC
TTTGGTTAGGGTGGGGAGATACAACTGGCTTTTTTGTAGTTTTCTTTTCC
TTTCTCTTTCTCTCTCTCTTTCTCTCTATCACTCACTGACCATTTTGCCT
TTCGTTGCTCTCTCTCTCTCTCTCTGTCTTTTGCGTTTGCCCTACGTTTC
ATGCGGACGAACCGTACCTTAAGGTATATTAAATGGAAGGAGAAAGTGAG
TTTAGGCATTGGGATGAACTAATACCTGATGCTCTTGGGCTGATCTTTAG
AAATCTGTCACTCCAGGAGGTATTAACCGTGATACCAGGGGTTTGCAAAT
CATGGCGTAGAGCAGTAATTGGACCATATTGCTGGCAAGAGATTGACATT
GAGGAATGGAGTAATCGGTGCCAACCGGACCACCTCAATCGGATGGTTGA
AATGTTGATCACAAGAAGATCTGGATCTCTCCGCAAGCTCTGTGTTTCTG
GCCTGCACAATGATATGATGTTTTCCTTGATTGCACAAAATGCTGGTTCC
CTTCAGACATTGCGACTTCCAAGAAGTGAAATGAGTGACTCCATAGTGGC
TCAGATAGCTGGAAGGTTGTCTGC
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