CF838102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838102 vs. ExPASy Swiss-Prot
Match: RU1C_DICDI (U1 small nuclear ribonucleoprotein C OS=Dictyostelium discoideum GN=snrpC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.898e-14 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 1 Query: 58 EYYCDYCDTYLTHDSPSVIKQHNAGYKHEADVRSYYHQFEEQQTQSLIDHRIKEH 222 +YYCDYCD YLTHDSPSV K H G +H+ V+ +Y QFE + TQSLI+ R+KE+ Sbjct: 3 KYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLFYQQFEAEFTQSLIEARLKEY 57
BLAST of CF838102 vs. ExPASy Swiss-Prot
Match: RU1C_XENLA (U1 small nuclear ribonucleoprotein C OS=Xenopus laevis GN=snrp1c PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 58 EYYCDYCDTYLTHDSPSVIKQHNAGYKHEADVRSYYHQFEEQQTQSLIDHRIKEHLGQTAAFQ 246 ++YCDYCDTYLTHDSPSV K H +G KH+ +V+ YY ++ E+Q QSLID TAAFQ Sbjct: 3 KFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQ 58
BLAST of CF838102 vs. ExPASy Swiss-Prot
Match: RU1C_MOUSE (U1 small nuclear ribonucleoprotein C OS=Mus musculus GN=Snrpc PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 58 EYYCDYCDTYLTHDSPSVIKQHNAGYKHEADVRSYYHQFEEQQTQSLIDHRIKEHLGQTAAFQ 246 ++YCDYCDTYLTHDSPSV K H +G KH+ +V+ YY ++ E+Q QSLID TAAFQ Sbjct: 3 KFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQ 58
BLAST of CF838102 vs. ExPASy Swiss-Prot
Match: RU1C_HUMAN (U1 small nuclear ribonucleoprotein C OS=Homo sapiens GN=SNRPC PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 58 EYYCDYCDTYLTHDSPSVIKQHNAGYKHEADVRSYYHQFEEQQTQSLIDHRIKEHLGQTAAFQ 246 ++YCDYCDTYLTHDSPSV K H +G KH+ +V+ YY ++ E+Q QSLID TAAFQ Sbjct: 3 KFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQ 58
BLAST of CF838102 vs. ExPASy Swiss-Prot
Match: RU1C_BOVIN (U1 small nuclear ribonucleoprotein C OS=Bos taurus GN=SNRPC PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 64 YCDYCDTYLTHDSPSVIKQHNAGYKHEADVRSYYHQFEEQQTQSLIDHRIKEHLGQTAAFQ 246 YCDYCDTYLTHDSPSV K H +G KH+ +V+ YY ++ E+Q QSLID TAAFQ Sbjct: 5 YCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQ 58 The following BLAST results are available for this feature:
BLAST of CF838102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838102 ID=CF838102; Name=CF838102; organism=Citrus sinensis; type=EST; length=592bpback to top |