CF838118

Overview
NameCF838118
Unique NameCF838118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 347.821 bits (891), Expect = 3.292e-95
Identity = 166/187 (88.77%), Postives = 179/187 (95.72%), Query Frame = -1
Query:  147 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 707
            AAI+QDNGLVPIVEPEILLDG+HGIDRTFEVA+KVWAE FFY+AENNVMFEGILLKPSMVTPGAECK++ATP+QV++YTLKLLHRRIPPAVPGIMFLSGGQSEVEAT NLNAMNQGPNPWHVSFSYARALQNTCLKTWGG+PENVKAAQD LL RAKANSLAQLGKYT +GE+ EAK+GMFVK Y Y
Sbjct:  202 AAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 8.108e-94
Identity = 166/187 (88.77%), Postives = 178/187 (95.19%), Query Frame = -1
Query:  147 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 707
            AAI+QD+GLVPIVEPEILLDG+H IDRT++VA+KVWAEVFFYLA+NNVMFEGILLKPSMVTPGAE K++ATP+QVA YTLKLL  R+PPAVPGIMFLSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGGRPENV AAQ TLL RAKANSLAQLGKYTGEGESEEAK+GMFVKGYTY
Sbjct:  212 AAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 340.887 bits (873), Expect = 4.024e-93
Identity = 164/187 (87.70%), Postives = 178/187 (95.19%), Query Frame = -1
Query:  147 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 707
            AAI+QD+GLVPIVEPEI+LDG+HGIDRT++VA+KVWAEVFFYLA+NNVMFEGILLKPSMVTPGAE  ++ATP+QVA YTLKLL  RIPPAVPGIMFLSGGQSE+EATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGG+ ENVKAAQD LL RAKANSLAQLGKYTGEGESEEAK+GMFVKGYTY
Sbjct:  213 AAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.766e-91
Identity = 163/187 (87.17%), Postives = 176/187 (94.12%), Query Frame = -1
Query:  147 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 707
            AAI+QDNGLVPIVEPEILLDG+HGIDRTFEVA+KVWAEVF+YLAENNV FEGILLKPSMVTPGAE K+KA+P +VAEYTL LLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAKK +FVKGY+Y
Sbjct:  170 AAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 323.553 bits (828), Expect = 6.648e-88
Identity = 160/187 (85.56%), Postives = 173/187 (92.51%), Query Frame = -1
Query:  147 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 707
            AAI+QDNGLVPIVEPEILLDG+HGIDRTFEVA+KVWAEVF+YLAENNV FEGILLKPSMVTPGAE K+KA+P +VAEYTL LLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAKK    +GY+Y
Sbjct:  164 AAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.365e-85
Identity = 151/187 (80.75%), Postives = 171/187 (91.44%), Query Frame = -1
Query:  147 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 707
            AAI+QDNGLVPIVEPEILLDGDH I+RT EVA+KVW+EVFFYLA+NNVMFEGILLKPSMVTPGAE K KA+P+ VA++TL +L RR+PPAVPGIMFLSGGQSE EATLNLNAMNQ PNPWHVSFSYARALQN+ L+TW G+PE ++A+Q  LL RAKANSLAQLGKY+ EGE+E+AKKGMFVKGYTY
Sbjct:  205 AAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVMFEGILLKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 272.707 bits (696), Expect = 1.346e-72
Identity = 142/183 (77.60%), Postives = 151/183 (82.51%), Query Frame = -1
Query:  159 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVK 707
            AAI QDNGL PI+EPEI+LDG+HGIDRTF VA++VWAEVFF LAENNV+ EG  LKPSMV PGA    K  P+QVA+Y LKLLHRR  P VPGIM LSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTW    ENVK AQD     AK+NSLAQLGKYTGEGESEE KK MFVK
Sbjct:  210 AAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVK-AQD--FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.126e-64
Identity = 125/187 (66.84%), Postives = 144/187 (77.01%), Query Frame = -1
Query:  147 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 707
            AAIAQ+ GLVPIVEPE+LLDG+H IDR  EV + +WAE F Y+A+N VM +GILLKP+MVTPGA+CK KA P +VAEYTLK+L  R PP VPGIMFLSGGQSE+E+TLNLNAMNQ PNPWHVSFSYARAL NT LKTW   P  V+A +     R KANS AQ GKY    E +EA +GM+ KG  Y
Sbjct:  188 AAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.265e-54
Identity = 104/188 (55.32%), Postives = 140/188 (74.47%), Query Frame = -1
Query:  147 AAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPN-PWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 707
            AAI Q+NGLVPIVEPEIL+DG+H ++++ EV +KV A VF  L +++++ EG LLKP+MV  G +C  KAT +Q+ ++T++ L R +PPA+ G++FLSGGQ+E+EAT NLNAMN  PN PW +SFSY RALQ + + TW G   NV+AA+   L RAK NSLAQLGKYTGE  +  A + ++VK Y Y
Sbjct:  170 AAICQENGLVPIVEPEILMDGNHTVEQSAEVTEKVLAAVFKALNDHHILLEGALLKPNMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of CF838118 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.639e-52
Identity = 106/187 (56.68%), Postives = 133/187 (71.12%), Query Frame = -1
Query:  147 IAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 701
            I Q+NGLVPIVEPEIL+DG H IDR  EV+++V A  +  L +++V+ EG  LKP++VTPG+E K K TP+ +AEYT++ L R +P AVPG+MFLSGGQSE EATLNLNAMN  +   PW +SFSY RALQ + LK W G+ ENV  AQ+  L RAK NS A LGKY G     +A + + VK Y Y
Sbjct:  172 ICQENGLVPIVEPEILVDGTHDIDRCAEVSERVLAACYKALNDHHVLLEGTSLKPNIVTPGSESK-KVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357          
The following BLAST results are available for this feature:
BLAST of CF838118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC_ORYSJ3.292e-9588.77Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_ARATH8.108e-9488.77Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH4.024e-9387.70Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC1_PEA3.766e-9187.17Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_PEA6.648e-8885.56Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC3_ARATH2.365e-8580.75Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_SPIOL1.346e-7277.60Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE5.126e-6466.84Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_DICDI1.265e-5455.32Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_SPIOL2.639e-5256.68Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_05M09_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05M09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838118 ID=CF838118; Name=CF838118; organism=Citrus sinensis; type=EST; length=707bp
AAGAAGNTTATTCCTTTAAAAAAAGTACATGNAATCATGAACAAAAATAG
TCTCCAAAGGACGGGTATAAAGNATTAACACATTTGACATGACTACTCAT
TTCAAATTTCTTCACCATTCTTATGATCTTCGTGCTAACAAATTTAGTAG
GTGTATCCCTTGACGAACATTCCTTTCTTGGCCTCCTCTGATTCTCCCTC
GCCAGTGTACTTGCCGAGCTGAGCAAGTGAGTTGGCCTTGGCACGGGTGA
GCAGAGTATCCTGAGCTGCCTTGACATTCTCTGGCCTGCCACCCCATGTC
TTCAGGCAGGTGTTTTGGAGAGCTCTGGCATAAGAGAAAGATACGTGCCA
TGGGTTGGGACCTTGGTTCATGGCGTTCAAGTTGAGGGTTGCCTCAACCT
CAGATTGCCCACCAGACAAGAACATGATTCCGGGGACAGCTGGAGGGATT
CTCCTGTGAAGGAGCTTGAGTGTGTACTCAGCAACCTGTTGTGGTGTGGC
CTTCTCCTTGCATTCAGCACCAGGAGTGACCATGCTAGGCTTGAGGAGAA
TACCCTCAAACATGACATTGTTCTCAGCAAGGTAGAAGAAAACTTCAGCC
CAAACCTTCTTAGCTACTTCAAAAGTCCTGTCAATGCCATGATCACCATC
AAGCAAGATTTCTGGCTCCACAATTGGGACCAATCCGTTGTCTTGAGCAA
TGGCAGC
back to top