CF838121

Overview
NameCF838121
Unique NameCF838121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 426.402 bits (1095), Expect = 1.049e-118
Identity = 199/252 (78.97%), Postives = 220/252 (87.30%), Query Frame = 2
Query:  134 LISASDDA--TILYESYDESFDGRWIVSQKDEYKGVWKHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            L+ ASDDA   I YES+DE FDGRWIVS K++Y GVWKH+KS+GH+DYGLLV E A+KYAIVKEL E +SLKDGTVVLQ+E RLQNGLECGGAY+KYLRPQE+GW  KEFDNESPY IMFGPDKCGATNKVHFI KHKNPKSGEY+EHHLK PPSVPSDKLTHVYTAILKPDNEL+ILIDGEEK+KANFL+++DF+PPLIP KTI          WDERAKIPDP AVKP+DWDEDAPMEI DE+A KPEGW
Sbjct:   28 LVRASDDADDAIFYESFDEDFDGRWIVSDKEDYNGVWKHAKSDGHDDYGLLVSEQARKYAIVKELAESVSLKDGTVVLQFETRLQNGLECGGAYIKYLRPQESGWKPKEFDNESPYSIMFGPDKCGATNKVHFIFKHKNPKSGEYVEHHLKYPPSVPSDKLTHVYTAILKPDNELQILIDGEEKKKANFLSSEDFEPPLIPSKTIPDPDDKKPEDWDERAKIPDPSAVKPDDWDEDAPMEILDEEAEKPEGW 279          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 5.757e-117
Identity = 194/251 (77.29%), Postives = 216/251 (86.06%), Query Frame = 2
Query:  131 QLISASDDATILYESYDESFDGRWIVSQKDEYKGVWKHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            Q +   DD T+LYES+DE FDGRWIVS+  +Y+GVWKH+KSEGHEDYGLLV E A+KY IVKELDEPL+LK+GTVVLQYEVR Q GLECGGAYLKYLRPQEAGW  + FD+ESPY IMFGPDKCG TNKVHFILKHKNPKSGEY+EHHLK PPSVP DKL+HVYTAILKPDNE+RIL+DGEEK+KAN L+ +DF+P LIP KTI          WDERAKIPDP+AVKPEDWDEDAPMEIEDE+A KPEGW
Sbjct:   20 QKLCYCDDQTVLYESFDEPFDGRWIVSKNSDYEGVWKHAKSEGHEDYGLLVSEKARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCGGTNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVKPEDWDEDAPMEIEDEEAEKPEGW 270          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 6.365e-116
Identity = 193/249 (77.51%), Postives = 219/249 (87.95%), Query Frame = 2
Query:  137 ISASDDATILYESYDESFDGRWIVSQKDEYKGVWKHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            I AS DA I YES+DESF+G WIVS+K++Y G WKHSKSEGH+DYGLLV + A+KYAIVKEL++P+ LKDGT+VLQYEVRLQNGLECGGAYLKYLRPQ+AGW +K FDNESPY IMFGPDKCGATNKVHFILKHKNPKSG+Y+EHHLK PPSVPSDKLTHVYTA++KPDNEL ILIDGEEK+KANFL+++DF+P LIP KTI          WDERAKIPDP+A KP+DWDEDAPMEI DE+A KPEGW
Sbjct:   27 ICASSDA-IFYESFDESFEGSWIVSEKEDYPGEWKHSKSEGHDDYGLLVSDKARKYAIVKELEKPVELKDGTIVLQYEVRLQNGLECGGAYLKYLRPQDAGWTAKGFDNESPYSIMFGPDKCGATNKVHFILKHKNPKSGDYVEHHLKFPPSVPSDKLTHVYTAVIKPDNELVILIDGEEKKKANFLSSEDFEPALIPTKTIPDPDDKKPEDWDERAKIPDPEATKPDDWDEDAPMEILDEEAEKPEGW 274          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2)

HSP 1 Score: 414.461 bits (1064), Expect = 4.126e-115
Identity = 192/251 (76.49%), Postives = 215/251 (85.66%), Query Frame = 2
Query:  137 ISASDDATILYESYDESFDGRWIVSQKDEYKGVWKHSKSEGHEDYGLLVGEPAKKYAIVKELD--EPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            +S  DD TILYES+DE FDGRW+VS+K EY+GVWKH KSEGH+DYGLLV E AKKY IVKELD  EPL+L +GTVVLQYE R Q GLECGGAYLKYLRPQEAGWV + FDN+SPY IMFGPDKCGATNKVHFILKHKNPKSGE++EHHLK PPSVP D L+HVYTA+LK DNE+RIL+DGEEK+K N L+A+DF+PPLIP KTI          WDERAKIPDP+AVKP+DWDEDAPMEIEDE+A KPEGW
Sbjct:   22 VSYCDDQTILYESFDEPFDGRWVVSEKAEYQGVWKHEKSEGHDDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCGATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNAVKPDDWDEDAPMEIEDEEAEKPEGW 272          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 3.060e-110
Identity = 186/252 (73.81%), Postives = 213/252 (84.52%), Query Frame = 2
Query:  134 LISASD--DATILYESYDESFDGRWIVSQKDEYKGVWKHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            L+ ASD  D  I YES+DE FD RWIVS K+EY GVWKHSKSEGH+D+GLLV EPA+KYAIVKELD P+SLKDGTVVLQ+E RLQNGLECGGAY+KYL+ QE+GW  K FDNES Y IMFGPD+CGATNKVHFI +HKNPK+G+++EHHLK PPSVPSDKL+HVYTA+LK DNE+ ILIDGEEK+KANFL+++DF+P LIP KTI          WDERAKIPDP+AVKPEDWDEDAP EI DE+A KPE W
Sbjct:   29 LVRASDEVDDAIFYESFDEDFDNRWIVSGKEEYNGVWKHSKSEGHDDFGLLVSEPARKYAIVKELDAPVSLKDGTVVLQFETRLQNGLECGGAYIKYLQTQESGWKPKGFDNESGYSIMFGPDRCGATNKVHFIFRHKNPKTGKHVEHHLKFPPSVPSDKLSHVYTAVLKDDNEVSILIDGEEKKKANFLSSEDFEPALIPSKTIPDPDDKKPEDWDERAKIPDPEAVKPEDWDEDAPREIIDEEAEKPEPW 280          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 9.667e-56
Identity = 112/235 (47.66%), Postives = 146/235 (62.13%), Query Frame = 2
Query:  179 DESFDGRWIVSQKDEYKGVWKHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            D ++ G W V +     G+          D GL+V   A  +AI  +  + +  K  T+V+QYEV+ QN L CGGAY+K L+  +    ++EF N +PY+IMFGPDKCGATNKVHFI +HKNPK+GEY E H+  PP+  + KLT +YT I+KPD   +ILIDGE  +    L  +DF PP+ PEK I          W + AKIPDP+A KP+DWDEDAP EI DE+A  PE W
Sbjct:   77 DWAYVGEWAVEEPTVLNGMVG--------DKGLVVKNVAAHHAISAKFPKKIDNKGKTLVVQYEVKPQNSLVCGGAYMKLLQENKK-LHAEEFSNATPYVIMFGPDKCGATNKVHFIFRHKNPKTGEYEEKHMTAPPAARTTKLTTLYTLIVKPDQSFQILIDGEAVKNGTLL--EDFAPPVNPEKEIDDPKDKKPADWVDEAKIPDPEAKKPDDWDEDAPYEIVDEEATMPEDW 300          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX_PONAB (Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 5.865e-53
Identity = 115/256 (44.92%), Postives = 150/256 (58.59%), Query Frame = 2
Query:  170 ESYDESFDGRWIVSQ--KDE-------YKGVW-----KHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPS----VPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            +S+D      WI+S+  KD+       Y G W     K SK  G  D GL++   AK +AI  +L++P       +++QYEV  QNG+ECGGAY+K L       +  +F +++PY IMFGPDKCG   K+HFI +HKNPK+G Y E H K P +      +DK TH+YT IL PDN   IL+D       N L  +D  PP+ P + I          WDER KIPDP+AVKP+DWDEDAP +I DE+A KPEGW
Sbjct:   73 DSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKESKLPG--DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLD-QFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLL--NDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGW 323          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.865e-53
Identity = 115/256 (44.92%), Postives = 150/256 (58.59%), Query Frame = 2
Query:  170 ESYDESFDGRWIVSQ--KDE-------YKGVW-----KHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPS----VPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            +S+D      WI+S+  KD+       Y G W     K +K  G  D GL++   AK +AI  +L++P       +++QYEV  QNG+ECGGAY+K L  + A     +F +++PY IMFGPDKCG   K+HFI +HKNPK+G Y E H K P +      +DK TH+YT IL PDN   IL+D       N L  +D  PP+ P + I          WDER KI DPDAVKP+DWDEDAP +I DE+A KPEGW
Sbjct:   74 DSFDRGSLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPG--DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLS-KTAELSLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLL--NDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPDDWDEDAPSKIPDEEATKPEGW 324          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX_HUMAN (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 5.865e-53
Identity = 115/256 (44.92%), Postives = 150/256 (58.59%), Query Frame = 2
Query:  170 ESYDESFDGRWIVSQ--KDE-------YKGVW-----KHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPS----VPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            +S+D      WI+S+  KD+       Y G W     K SK  G  D GL++   AK +AI  +L++P       +++QYEV  QNG+ECGGAY+K L       +  +F +++PY IMFGPDKCG   K+HFI +HKNPK+G Y E H K P +      +DK TH+YT IL PDN   IL+D       N L  +D  PP+ P + I          WDER KIPDP+AVKP+DWDEDAP +I DE+A KPEGW
Sbjct:   73 DSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPG--DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLD-QFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLL--NDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGW 323          
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALX_RAT (Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.706e-52
Identity = 114/256 (44.53%), Postives = 150/256 (58.59%), Query Frame = 2
Query:  170 ESYDESFDGRWIVSQ--KDE-------YKGVW-----KHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPS----VPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883
            +S+D      WI+S+  KD+       Y G W     K +K  G  D GL++   AK +AI  +L++P       +++QYEV  QNG+ECGGAY+K L  + +     +F +++PY IMFGPDKCG   K+HFI +HKNPK+G Y E H K P +      +DK TH+YT IL PDN   IL+D       N L  +D  PP+ P + I          WDER KI DPDAVKP+DWDEDAP +I DE+A KPEGW
Sbjct:   74 DSFDRGSLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPG--DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLS-KTSELNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLL--NDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPDDWDEDAPSKIPDEEATKPEGW 324          
The following BLAST results are available for this feature:
BLAST of CF838121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CALX_SOYBN1.049e-11878.97Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CALX1_ARATH5.757e-11777.29Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CALX_HELTU6.365e-11677.51Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]
CALX2_ARATH4.126e-11576.49Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g... [more]
CALX_PEA3.060e-11073.81Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX_ASPFU9.667e-5647.66Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_... [more]
CALX_PONAB5.865e-5344.92Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2[more]
CALX_MOUSE5.865e-5344.92Calnexin OS=Mus musculus GN=Canx PE=1 SV=1[more]
CALX_HUMAN5.865e-5344.92Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2[more]
CALX_RAT1.706e-5244.53Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05M10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05M10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838121 ID=CF838121; Name=CF838121; organism=Citrus sinensis; type=EST; length=884bp
CTTGGGTTGATTGATTTTAAGATTTAGATTCAGATCGCGGTCTCGGACTC
TCTCTCTCTCACACATGGTGCAGAGAATGGCTGTCTCTCTGCGGTTCGCT
CTCCTGCTTTTCGCTGCTTTCGTTTCATTTCAATTGATCTCCGCTTCTGA
TGATGCCACGATCTTGTACGAGTCGTATGACGAGTCGTTCGACGGACGAT
GGATCGTTTCTCAGAAAGATGAATACAAAGGTGTATGGAAGCATTCAAAG
AGTGAGGGTCATGAAGATTATGGCCTTCTTGTTGGTGAGCCGGCAAAGAA
GTACGCGATAGTGAAGGAGCTTGATGAGCCCCTGAGTTTGAAGGATGGAA
CTGTTGTCCTCCAGTATGAGGTTCGCCTCCAGAATGGTCTTGAATGTGGT
GGTGCATATCTGAAATACCTGCGGCCTCAGGAGGCAGGTTGGGTATCCAA
GGAGTTCGACAATGAATCTCCGTATATGATTATGTTTGGACCTGATAAAT
GTGGTGCAACAAACAAGGTGCACTTCATCTTAAAGCATAAGAATCCCAAG
AGTGGAGAGTACATTGAACACCATCTCAAGAACCCACCTTCTGTGCCCTC
TGATAAACTGACTCATGTATACACTGCCATCTTGAAACCTGATAATGAGT
TGAGAATTTTAATTGATGGAGAGGAGAAGCAGAAGGCAAATTTCCTCGCT
GCTGATGATTTTCAGCCACCGCTCATTCCTGAGAAGACAATTCCTGATCC
AGATGACAAGAAGCCTGANGATTGGGATGAGAGGGCAAAGATTCCTGACC
CTGATGCAGTAAAACCTGAAGACTGGGATGAGGATGCTCCCATGGAAATT
GAAGATGAGGATGCTGTGAAACCTGAAGGATGGC
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