CF838128
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 64/182 (35.16%), Postives = 90/182 (49.45%), Query Frame = -2 Query: 160 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKLI 702 HINP V+F L S RA +YI+AQC+GGI G +V + H ++ G N+V G T AL EII +FV ++ +V+ A D ++ V V + +G VF+ T G G+NPAR +G A++ WD HW+FWAGP I +A A Y + I Sbjct: 100 HINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGV----GIVKGIMKHQYNANGGGANMVAS--------GYSTGTALGAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYI 264
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17 Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = -2 Query: 172 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALY 702 HINP V+ A T S ++ YI AQC+G I GA L V + +GG + V G + G G L +E+I +F +F +++ + DS++ G V + I +G L ++ Y GA +NPAR GPA++ G W+ HW++W GP I A +A ALY Sbjct: 95 HINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSVALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGALY 248
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17 Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = -2 Query: 187 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACV 702 HINP V+ A T S ++ YI AQC+G I GA L V + +GG + V G + G G L +E+I +F +F +++ + DS++ G + + I I +G L ++ Y GA +NPAR GPA++ G W+ HW++W GP I V Sbjct: 95 HINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLSAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGISVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAV 242
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 59/178 (33.15%), Postives = 89/178 (50.00%), Query Frame = -2 Query: 172 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALY 702 HINP V+ A T S ++ YI AQC+G I GA L V + +GG + V G + G G L +E+I +F +F +++ + DS++ G + + I +G L ++ Y GA +NPAR GPA++ G W+ HW++W GP I A +A ALY Sbjct: 98 HINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGALY 251
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17 Identity = 63/183 (34.43%), Postives = 89/183 (48.63%), Query Frame = -2 Query: 160 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG-GHLWDRHWVFWAGPAIACVAFALYTKLI 702 HINP V+F L S TRA Y++ QC+G I GA ++ +K + + GG NVV PG L EI+ +F+ V+ F + AK R + V I+ +G VF+ T G G+NPAR LG A++ GH WD HW+FW GP I A+Y +++ Sbjct: 114 HINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF--QKGLYETTGGGA--NVVAPG--------YTKGDGLGAEIVGTFIL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVV 278
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17 Identity = 55/172 (31.98%), Postives = 85/172 (49.42%), Query Frame = -2 Query: 187 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACV 702 HINP V+ A T S ++ YI AQC+G I GA L V + +GG + +V G + G G L +E+I +F +F +++ + DS++ G + + I +G L ++ Y GA +NPAR GPA++ G W+ HW++W GP I V Sbjct: 95 HINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTMV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAV 242
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17 Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = -2 Query: 172 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALY 702 HINP V+ A T S ++ YI+AQC+G I GA L V + +GG + V G + G G L +E+I +F +F +++ + DS++ G + + I +G L ++ Y GA +NPAR GPA++ G W HW++W GP + A +A ALY Sbjct: 95 HINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WANHWIYWVGPIMGAVLAGALY 248
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17 Identity = 55/172 (31.98%), Postives = 84/172 (48.84%), Query Frame = -2 Query: 187 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACV 702 HINP V+ A T S ++ YI AQC+G I GA L V + +GG + V G + G G L +E+I +F +F +++ + DS++ G + + I +G L ++ Y GA +NPAR GPA++ G W+ HW++W GP I V Sbjct: 95 HINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAV 242
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 63/182 (34.62%), Postives = 88/182 (48.35%), Query Frame = -2 Query: 160 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG-GHLWDRHWVFWAGPAIACVAFALYTKLI 702 HINP V+F L S TRA YI+ QC+G I GA ++ +LGG V G GLG EII +FV ++ +V+ A D++++ V + + +G VF+ T G G+NPAR LG A++ H WD HW+FW GP I ALY +L+ Sbjct: 112 HINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQ---TLGGGANTVAHGYTKGS---GLGA------EIIGTFVLVY-TVFSATDAKRSARDSHVPILAPLP--IGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLV 276
BLAST of CF838128 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 64/184 (34.78%), Postives = 84/184 (45.65%), Query Frame = -2 Query: 160 HINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLG-GCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKLI 702 HINP V+F L S TRA YI+ QC+G I G A V K +G G NVV P G L EI+ +F+ V+ F + AK R + V I+ +G VF+ T G G+NPAR LG A++ H W HW+FW GP I A+Y ++I Sbjct: 118 HINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICG-----AGVVKGFQQGLYMGNGGGANVVAP--------GYTKGDGLGAEIVGTFIL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVI 282 The following BLAST results are available for this feature:
BLAST of CF838128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838128 ID=CF838128; Name=CF838128; organism=Citrus sinensis; type=EST; length=703bpback to top |