CF838129

Overview
NameCF838129
Unique NameCF838129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 1.757e-16
Identity = 69/230 (30.00%), Postives = 103/230 (44.78%), Query Frame = 3
Query:  138 KKILGFEDIFSVK-VWRASMAELLGTAVLVFALDTIVISSIQTDTK-TPNLVMSTLVXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGH 818
            K+I+G  DI   + +WR  +AE LGT  LV     I I S    T  +P L                 F  +SG HINP V+    +T   S  + A YI++QC+G I GA  ++A    ++     +GG  +  + P        GL T Q + +E + +F+ +F  V    D+R+    G   + I +    G L  +         Y GA +NPAR  GPA+V G +
Sbjct:    8 KQIVGVSDITENRNIWRMLVAEFLGTFFLV----AIGIGSTTGWTDYSPTLTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEV-----VGGLGVTGIAP--------GLSTGQGVLIEALITFMLVFV-VHGVCDNRRTDVKGSAPLAIGLSITAGHLAAIK--------YTGASMNPARSFGPAVVMGNY 211          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 64/225 (28.44%), Postives = 106/225 (47.11%), Query Frame = 3
Query:  144 ILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTP-NLVMSTLVXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG 812
            ++ F+ +++   W+A  AE L T + V       I+   ++   P ++V+ +L            F  ISGGHINP V+ A   T   S  ++  YI+AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G
Sbjct:   23 MVAFKGVWTQAFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMG 225          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 66/227 (29.07%), Postives = 110/227 (48.46%), Query Frame = 3
Query:  144 ILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTP---NLVMSTLVXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG 812
            ++ F+ +++   W+A  AE L  A+L+F L ++  +     T+ P   ++V+ +L            F  ISGGHINP V+ A   T   S  ++  YI AQC+G I GA  L  V    +     +GG  + +V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTMV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMG 225          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 5.651e-15
Identity = 66/227 (29.07%), Postives = 109/227 (48.02%), Query Frame = 3
Query:  144 ILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTP---NLVMSTLVXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG 812
            ++ F+ +++   W+A  AE L  A+L+F L ++  +      + P   ++V+ +L            F  ISGGHINP V+ A   T   S  ++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I I   +G L  ++        Y GA +NPAR  GPA++ G
Sbjct:   23 MVAFKGVWTQTFWKAVTAEFL--AMLIFVLLSLGSTINWGGAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLSAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGISVAIGHLFAIN--------YTGASMNPARSFGPAVIMG 225          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.380e-15
Identity = 66/227 (29.07%), Postives = 109/227 (48.02%), Query Frame = 3
Query:  144 ILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTP---NLVMSTLVXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG 812
            ++ F+ +++   W+A  AE L  A+L+F L ++  +     ++ P   ++V+ +L            F  ISGGHINP V+ A   T   S  ++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G V + I     +G L  ++        Y GA +NPAR  GPA++ G
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSVALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMG 225          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.639e-15
Identity = 65/227 (28.63%), Postives = 109/227 (48.02%), Query Frame = 3
Query:  144 ILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTP---NLVMSTLVXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG 812
            ++ F+ +++   W+A  AE L  A+L+F L ++  +     ++ P   ++V+ +L            F  ISGGHINP V+ A   T   S  ++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G
Sbjct:   26 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMG 228          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.147e-14
Identity = 65/227 (28.63%), Postives = 108/227 (47.58%), Query Frame = 3
Query:  144 ILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTP---NLVMSTLVXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG 812
            ++ F+ +++   W+A  AE L  A+L+F L ++  +      + P   ++V+ +L            F  ISGGHINP V+ A   T   S  ++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSLGSTINWGGKENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMG 225          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.066e-13
Identity = 64/223 (28.70%), Postives = 93/223 (41.70%), Query Frame = 3
Query:  156 EDIFSVKVWRASMAELLGTAVLVFALDTIVIS--SIQTDTKTPN--LVMSTLVXXXXXXXXXXXFPISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLV--FVSTTVTAQKGYAGAGLNPARCLGPALV 806
            ED       RA+++E L TA+ VFA +  ++S   +  D  TP   + +S                ISGGH+NP ++F A L G  S  RA  Y LAQ +G +   L L           F+L                  G+G   A+ LE   +F  ++A      D ++            +GT+  L V   +   + A   + GAG+NPAR  GPALV
Sbjct:   18 EDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALAS----------------GVGDWHAVLLEATMTFGLMYAYYATVIDPKRGH----------VGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV 214          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.374e-13
Identity = 70/237 (29.54%), Postives = 106/237 (44.73%), Query Frame = 3
Query:  138 KKILGFEDIFSVK-VWRASMAELLGTAVLVFALDTIVISSIQ--------TDTK---TPNLVMSTLVXXXXXXXXXXXFPISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG 812
            K+++G  DI   + +WR  +AE LGT  LV    +I I S          T T+   T  LV++TL              +SG HINP V+    +T   S  + A YI++QCVG I GA  ++A     +     +GG  +  + P         L   Q + +E + +F+ +F  V    D+R++   G   + I +    G L  +         Y GA +NPAR  GPA+V G
Sbjct:    8 KQLVGVADITENRNIWRMLVAEFLGTFFLV----SIGIGSTMGWGGDYAPTMTQIAFTFGLVVATLAQAFGH--------VSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDV-----IGGLGVTGIDP--------RLTAGQGVMIEALITFILVFV-VHGVCDNRRSDIKGSAPLAIGLSITAGHLSAIK--------YTGASMNPARSFGPAVVMG 210          
BLAST of CF838129 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 63/226 (27.88%), Postives = 99/226 (43.81%), Query Frame = 3
Query:  141 KILGFEDIF-SVKVWRASMAELLGTAVLVFA-LDTIVISSIQTDTKTPNLVMSTLVXXXXXXXXXXXFPISGGHINPLVSFAAALTGITSFTRAAIYILAQCVGGIFGALALEAVVTKKIAHNFSLGGCTLNVVVPGPDGPVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG 812
            K +G  DI  + K+WR  + EL+GT  L+F  + +    S+     T  L ++T+              +SG HINP V+    + G  S  +AA YI+ QCVG I GA  ++  +         + G  L V    P       L   QA+ +E + +F+ +F  V    D  +    G   + + +    G L  +          +GA +NPAR  GPA+V+G
Sbjct:    9 KFVGVADITENKKIWRMLLGELVGTFFLIFVGVGSTTSGSVPQIAFTFGLTVATIAQGLGH--------LSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALD-------GVAGGDLGVSSFDP------SLNCAQAVLIEALITFILVFV-VKAVSDPGRQDIKGSAPLAVGLAIAAGHLCAIK--------LSGASMNPARSFGPAVVQG 204          
The following BLAST results are available for this feature:
BLAST of CF838129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
AQP_ANOGA1.757e-1630.00Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP4_MOUSE3.313e-1528.44Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_HUMAN4.327e-1529.07Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_BOVIN5.651e-1529.07Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP4_RAT7.380e-1529.07Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL9.639e-1528.63Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_DIPME2.147e-1428.63Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
TIP31_ORYSJ1.066e-1328.70Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQP_AEDAE2.374e-1329.54Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_DROME3.101e-1327.88Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05M15_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838129 ID=CF838129; Name=CF838129; organism=Citrus sinensis; type=EST; length=822bp
CAAATATGGCCGCAAATTCGGAACTGGCCGGTGATATAGAGGGTGAATAT
GGTGGTAACAGAGTCCAGCCTTTTGCTACACCAAAGCAAGAGCAGAGACT
GATGGATGAAGAGAAGAGACAGAATCCCTCCACATGGAAAAAGATTTTGG
GATTTGAAGACATTTTTTCTGTGAAAGTGTGGAGAGCATCAATGGCTGAG
CTGCTTGGTACAGCAGTGCTGGTTTTTGCACTGGACACAATAGTCATTTC
CTCCATTCAAACAGACACAAAGACCCCAAATCTTGTAATGTCAACTTTGG
TCGCAATCATAATAACAATCCTCCTAATTGCAACTTTTCCAATTTCTGGT
GGGCACATCAACCCATTAGTGTCCTTTGCTGCAGCACTCACTGGCATCAC
ATCCTTCACAAGGGCAGCCATATACATTTTGGCTCAATGTGTTGGTGGCA
TTTTCGGTGCACTAGCACTAGAAGCTGTGGTGACCAAGAAAATTGCACAT
AATTTTTCACTTGGAGGCTGCACCCTGAATGTTGTGGTACCTGGGCCAGA
TGGGCCTGTTGAGATCGGCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGA
TAATTTGCTCGTTTGTGTTCCTTTTTGCTTCTGTGTGGATGGCTTTTGAC
TCCAGACAAGCCAAGGCTCTTGGCAGAGTTACCGTATGCATTGTCATTGG
AACAGTGTTGGGTCTTCTGGTTTTTGTCTCGACAACTGTTACTGCTCAAA
AGGGCTATGCTGGAGCTGGGCTCAACCCGGCAAGATGCTTGGGCCCAGCA
CTCGTTAGAGGAGGCCATCTCT
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