CF838132

Overview
NameCF838132
Unique NameCF838132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.490e-65
Identity = 121/138 (87.68%), Postives = 132/138 (95.65%), Query Frame = -1
Query:  246 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRS 659
            MANAASGMAV DDCKLKFLELKAKRTYRFI++KIEEKQK+VVVEKLGEP++SYE+FTA LPADECRYAVYDFDF+T EN QKS+I FIAWSPDT++VRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDV RSR+
Sbjct:    1 MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRA 138          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.583e-64
Identity = 118/139 (84.89%), Postives = 132/139 (94.96%), Query Frame = -1
Query:  243 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRSN 659
            MANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+GEP++SYE+F ASLP +ECRYAVYDFDFVT ENCQKS+I FIAW PDT++VRSKMIYASSKDRFKRELDGIQVELQA DPTEMGLDV++SR+N
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.915e-63
Identity = 115/139 (82.73%), Postives = 133/139 (95.68%), Query Frame = -1
Query:  243 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRSN 659
            MANAASGMAVDD+CKLKFLELKAKRTYRFI++KI+EK+K VVVEK+GEP  +Y++F ASLPA+ECRYA++D+DFVT+ENCQKSKI FIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVELQATDPTE+GLDV+R R+N
Sbjct:    1 MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 3.267e-63
Identity = 118/139 (84.89%), Postives = 129/139 (92.81%), Query Frame = -1
Query:  243 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRSN 659
            MANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YE+F ASLPADECRYA+YDFDFVT ENCQKSKI FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPTEM LDV++SR N
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.267e-63
Identity = 118/139 (84.89%), Postives = 127/139 (91.37%), Query Frame = -1
Query:  243 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRSN 659
            MANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+G+P  +YE F A LPADECRYA+YDFDFVT ENCQKSKI FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPTEM LDV RSR+N
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.341e-61
Identity = 115/139 (82.73%), Postives = 127/139 (91.37%), Query Frame = -1
Query:  243 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRSN 659
            MANAASGMAV DDCKLKF+ELKAKRT+R IV+KIE+KQ  V+VEKLGEP  SY++F ASLPAD+CRY +YDFDFVT ENCQKSKI FIAWSPDT+KVR KMIYASSKDRFKRELDGIQVELQATDPTEMGLDV +SR+N
Sbjct:    1 MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.589e-60
Identity = 108/138 (78.26%), Postives = 131/138 (94.93%), Query Frame = -1
Query:  246 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRS 659
            M+N+ASGMAV D+CKLKFLELKAKR++RFIVFKI EK +QVVV++LG+P +SY++FTA LPADECRYAV+DFDFVTDENCQKSKI FI+W+PDTS+VRSKM+YASSKDRFKRELDGIQVELQATDP+EM +D+++SR+
Sbjct:    1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.678e-59
Identity = 105/138 (76.09%), Postives = 130/138 (94.20%), Query Frame = -1
Query:  246 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRS 659
            MAN++SGMAVDD+CKLKF+ELKAKR +RFIVFKIEEK +QV VE+LG+P++SY++FT  LP +ECRYAV+DFDFVTDENCQKSKI FI+WSPDTS+VRSKM+YAS+KDRFKRELDGIQVELQATDP+EM +D++++R+
Sbjct:    1 MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKARA 138          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.678e-59
Identity = 105/138 (76.09%), Postives = 130/138 (94.20%), Query Frame = -1
Query:  246 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRS 659
            MAN+ASGMAV D+CKLKF ELK+KR++RFI FKI+E+ +QVVV++LG+P D+Y++FTAS+PA ECRYAV+DFDFVTDENCQKSKI FI+WSPDTSKVRSKM+YASSKDRFKRELDGIQVELQATDP+EM +D++++R+
Sbjct:    1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKARA 138          
BLAST of CF838132 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.678e-59
Identity = 107/139 (76.98%), Postives = 125/139 (89.93%), Query Frame = -1
Query:  243 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRSN 659
            MAN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++KLG P ++YE+FT S+P DECRYAVYD+DF T ENCQKSKI FIAWSPDTS+VRSKM+YASSKDRFKRELDGIQVELQATDP+EM LD+++ R N
Sbjct:    1 MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139          
The following BLAST results are available for this feature:
BLAST of CF838132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ADF2_PETHY3.490e-6587.68Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF1_PETHY6.583e-6484.89Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF7_ORYSJ1.915e-6382.73Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF4_ARATH3.267e-6384.89Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF1_ARATH4.267e-6384.89Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF2_ARATH2.341e-6182.73Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF1_ORYSJ2.589e-6078.26Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]
ADF_LILLO1.678e-5976.09Actin-depolymerizing factor OS=Lilium longiflorum ... [more]
ADF6_ORYSJ1.678e-5976.09Actin-depolymerizing factor 6 OS=Oryza sativa subs... [more]
ADF10_ARATH1.678e-5976.98Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05M19_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05M19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838132 ID=CF838132; Name=CF838132; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTACCCCCCACAAACCATTATATATTAGTCTGTAATTATCAT
CACACCATATGGGGATACTCACCCTATTAATCCACAGATATAACAAATGG
GAAGACAAATTAAAAAAGTATTTAACTCCGACCACAAGCCGATAGCAAAG
CAAGTTATAAGTCATAAAAGATATAGACATTACATTTAAGTGAACAATAT
AGTATGGGCTTTCCATTGCACCATAGGCAAGTCTAAAATTTAATTCGAAC
GGCTTCTCATGACATCAAGACCCATCTCAGTAGGATCAGTAGCCTGCAAC
TCTACCTGAATTCCATCCAATTCTCTCTTGAACCTGTCCTTGGAGCTAGC
ATAAATCATCTTGCTTCTCACCTTTGAGGTGTCGGGGGACCATGCAATGA
AAATAATCTTGCTCTTCTGGCAGTTCTCATCAGTCACAAAGTCAAAATCA
TAGACAGCGTATCGGCACTCATCCGCTGGGAGGCTAGCAGTAAAATTCTC
ATAACTATCAGATGGTTCACCAAGCTTCTCCACAACAACCTGCTTCTGCT
TCTCTTCAATCTTGAAAACTATGAAGCGGTAAGTCCTTTTTGCCTTCAAT
TCCAAAAACTTCAGCTTGCAGTCATCGTCGACTGCCATTCCAGATGCTGC
ATTTGCCATTTTCTGGAGAGAAAATGAGGGAAATTGAGAGAAAATCTAGG
GATTCTATAGTGAGAAAGAGAGAGGCCTCGTGCCGAATGAGCTGAGCAAC
CATGTAGCAAATGAGGAAGTTATTACTGCAGTGCCTGCAATGGCTGCTGT
TTCTGCTGATCAGTCTGTAAC
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