CF838137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.048e-40 Identity = 106/260 (40.77%), Postives = 132/260 (50.77%), Query Frame = 3 Query: 51 MCGGALIADYDEVRPVRRERKLTSEDLWSEF--GSISDLLGLDYNGKSHPKQPLKVKNEKAEDSSNKAARTEWKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF--------------XXXXXXXXXXXXKKRCMPS---PELTQPRFETIGTPPAPAPSPWVGFGYQNEFYQ-PRAVDDEFELSQQISRLESFLGLEPLMSQPSGNVAGGCDSVDFWMLDDV 770 MCGGA+I+DY + + RKLT+E+LWSE + D G K HP + VK E + + + E +R RKNVYRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT K+IRGDKAKLNF KK C+ S EL+QP F P +GFG +EF + +++L QQIS LESFL L+ ++ + VD WMLDDV Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEAVK-------KEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSF----------PVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQLDESVSEVDMWMLDDV 243
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19 Identity = 59/139 (42.45%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 51 MCGGALIADYDEVRPVRRERKLTSEDLWSEFGSISDLLGLDYNGKSHPKQPLKVKNEKAEDSSNKAARTEWKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 467 MCGGA+I+D+ +WS+ S LG + K ++P+ V +E+ +R RKN+YRGIRQRPWGKWAAEIRDP KGVRVWLGTF T +IRG KAKLNF Sbjct: 1 MCGGAIISDF----------------IWSKSESEPSQLGSVSSRKK--RKPVSVS----------------EERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.526e-19 Identity = 64/183 (34.97%), Postives = 77/183 (42.08%), Query Frame = 3 Query: 51 MCGGALIADYDEVRPVRRERKLTSEDLW-----------------SEFGSISDLLGLDYNG---------------------------KSHPKQPLKVKNEKAEDSSNKAARTEWKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 467 MCGGA+I+D+ P R R++TSE +W S F D+ G S PK + E + EK R RKN YRGIRQRPWGKWAAEIRDP +G R+WLGTF T +RIRG KAK+NF Sbjct: 1 MCGGAIISDFI---PPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18 Identity = 66/186 (35.48%), Postives = 83/186 (44.62%), Query Frame = 3 Query: 51 MCGGALIADYDEVRPVRRERKLTSEDLW-----------------SEFGSISDLLGLDYNG--------------------------KSHPKQPLKVKNEKAEDSSNKAART----EWKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 467 MCGGA+I+D+ P R ++T+E +W S+F + D D+ G + P V S A +T E EK ++R RKN YRGIRQRPWGKWAAEIRDP KG R WLGTF+T +RIRG KAK+NF Sbjct: 1 MCGGAIISDFI---PPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNF 183
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.877e-18 Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 270 KKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 467 K +R RKN +RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ +RIRG KAK+NF Sbjct: 110 KSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNF 175
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.062e-16 Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 3 Query: 255 TEWKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 467 ++ K+K++ R Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT KRIRG KAKLNF Sbjct: 15 SDGKKKQSSR-----YKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNF 80
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.062e-16 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 228 EDSSNKAARTEWKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 467 E+S +KA E +EKK + YRG+RQRPWGKWAAEIRDP++ RVWLGTF+T R RG+KAKLNF Sbjct: 59 EESMSKAFPEEAREKKRR------YRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.517e-16 Identity = 56/136 (41.18%), Postives = 66/136 (48.53%), Query Frame = 3 Query: 264 KEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNFXXXXXXXXXXXXKKRCMPSPELTQPRFETIGTPPAPAP--SPWVGFGYQNEFYQPRAVDDEFELSQQI 665 +EK R R YRG+RQRPWGKWAAEIRDP K RVWLGTF+T RG KAKLNF + PSP + R I TPP+P P +P + F Q R+ D LS + Sbjct: 60 QEKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF-----PEHIRVNPTQLYPSPATSHDRI--IVTPPSPPPPIAPDILLDQYGHF-QSRSSDSSANLSMNM 185
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15 Identity = 40/74 (54.05%), Postives = 44/74 (59.46%), Query Frame = 3 Query: 246 AARTEWKEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 467 +A T+ E R YRG+RQRPWGKWAAEIRDP+K RVWLGTF T R RG KAKLNF Sbjct: 43 SAVTKECESSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNF 116
BLAST of CF838137 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14 Identity = 36/61 (59.02%), Postives = 40/61 (65.57%), Query Frame = 3 Query: 285 VRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 467 +RK YRG+RQRPWGKWAAEIRDP K RVWLGTF T + +G KAKLNF Sbjct: 87 LRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147 The following BLAST results are available for this feature:
BLAST of CF838137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838137 ID=CF838137; Name=CF838137; organism=Citrus sinensis; type=EST; length=775bpback to top |