CF838139

Overview
NameCF838139
Unique NameCF838139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 5.247e-80
Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = -3
Query:  269 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 721
            KFGAVFASIPAPI+AALYCLFFAYVGAGGLSFLQFCNLNSFR KFILGFS+F+GLS+PQYFNEYTAI G+GPVHT  RWFNDMVNVPFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFYSLPFNLNKYFPSV
Sbjct:  382 KFGAVFASIPAPIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGARWFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFPSV 532          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 8.669e-75
Identity = 124/151 (82.12%), Postives = 138/151 (91.39%), Query Frame = -3
Query:  269 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 721
            KFGAVFASIP+PI+AALYCLFFAYVGAGGLS LQFCNLNSFR  FILGFSIF+GLS+PQYFNE+TAI G+GPVHT  RWFNDMVNVPFSS+ FV GCVA+ LD TLHKKDG +RKDRG+HWWD+FW+FK D R+EEFY+LPFNLNKYFPSV
Sbjct:  378 KFGAVFASIPSPIIAALYCLFFAYVGAGGLSLLQFCNLNSFRTLFILGFSIFLGLSIPQYFNEHTAIKGYGPVHTGARWFNDMVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFPSV 528          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.886e-70
Identity = 120/151 (79.47%), Postives = 134/151 (88.74%), Query Frame = -3
Query:  269 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 721
            KFGA+FASIPAP+VAAL+CLFFAYVGAGGLS LQFCNLNSFR KFILGFS+F+GLS+PQYFN+YTA+N +GPVHT  RWFNDM+NVPFSS+ FVAG +AFFLD T+  KD   RKDRG  WWD+F SFK DTRSEEFYSLPFNLNKYFPSV
Sbjct:  388 KFGAIFASIPAPVVAALHCLFFAYVGAGGLSLLQFCNLNSFRTKFILGFSVFMGLSIPQYFNQYTAVNKYGPVHTHARWFNDMINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFPSV 538          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.875e-61
Identity = 108/150 (72.00%), Postives = 126/150 (84.00%), Query Frame = -3
Query:  272 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 721
            KFGA+FASIPAPIVAALYCLFF+YVGAGGLS +QFCNLNSFR KFILGFSIF+GLS+PQYF +YT +  +GPV TS  WFN+++NVPFSS+ FV+G +AFFLD TL  KD   +KDRG  WW +F SF+ D RSEEFYSLP NL+KYFPS
Sbjct:  389 KFGAIFASIPAPIVAALYCLFFSYVGAGGLSLIQFCNLNSFRTKFILGFSIFMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFPS 538          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 9.034e-48
Identity = 95/150 (63.33%), Postives = 108/150 (72.00%), Query Frame = -3
Query:  272 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 721
            KFGAV ASIP PI AALYC+ FAYV + GL  LQFCNLNSFR KFILGFSIFIGLSV QYF EY  I+G GPVHT    FN ++ V FSS   V    AF LD T       VR+D GRHWW+KF  +  DTR+EEFY+LP+NLN++FPS
Sbjct:  376 KFGAVLASIPLPIFAALYCVLFAYVASAGLGLLQFCNLNSFRNKFILGFSIFIGLSVAQYFTEYLFISGRGPVHTRTSAFNVIMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFPS 525          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.884e-45
Identity = 90/151 (59.60%), Postives = 105/151 (69.54%), Query Frame = -3
Query:  269 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 721
            KFGAV ASIP PI AALYC+ FAY    G S LQ+CNLNS R KFIL  S+F+GLS+PQYF  Y    GFGPVHT    FN MVNV FSS   VA  +A+ LD T    +  V+KDRG  WW+KF S+K D RSEEFY LP+ L++YFPS+
Sbjct:  377 KFGAVLASIPLPIFAALYCVLFAYSAGAGFSLLQYCNLNSLRTKFILSISLFLGLSIPQYFRVYEMFFGFGPVHTHSVAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFPSL 527          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.060e-44
Identity = 85/149 (57.05%), Postives = 108/149 (72.48%), Query Frame = -3
Query:  275 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 721
            KFGA+FASIP  I AA+YC+ F  V + GLSFLQF N+NS R  FI+G S+F+GLS+P+YF +++     GP HT+  WFND +N  F S P VA  VA FLDNTL  K  +  +DRG  WW KF +FKGD+R+EEFY+LPFNLN++FP
Sbjct:  376 KFGALFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSLRNLFIVGVSLFLGLSIPEYFRDFSMKALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYK--ETARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFP 522          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.676e-41
Identity = 80/149 (53.69%), Postives = 104/149 (69.80%), Query Frame = -3
Query:  275 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 721
            KFGAVFASIP PI AAL+C+ F  V A GLSFLQF N+NS R   I G S+F+G+S+PQ+F +Y     +G VHT+  WFN  +N  F S   V   +A F+DNT+  +  + +KDRG  WW KF +F+GD R+EEFY+LPFNLN++FP
Sbjct:  372 KFGAVFASIPVPIYAALHCILFGLVAAVGLSFLQFTNMNSMRNLMITGLSLFLGISIPQFFAQYWDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVE--RSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFP 518          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.055e-40
Identity = 79/150 (52.67%), Postives = 98/150 (65.33%), Query Frame = -3
Query:  272 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 721
            KFGA FASIP PI+A+LYC+   +V + GLS+LQFCNLNSF +KFILGFS F+ +S+PQYF EY   NG         W  DM+ V F S   VA  +A  LD TL +   + +KD G  WWDKF  +  D R++EFY LP  LNK+FPS
Sbjct:  393 KFGAFFASIPLPIMASLYCIVLCFVSSVGLSYLQFCNLNSFNIKFILGFSFFMAISIPQYFREY--YNGGWRSDHHSNWLEDMIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFPS 540          
BLAST of CF838139 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = -3
Query:  272 KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 721
            KFGA FASIP PI A +YC+    V A G+SF+QF + NS R  +++G S+F+ LS+ QYF   T+  G+GPV T+G WFND++N  F+S P VA  +A  LDNTL  +       RG  WW  F    GD R++EFYS+P  +N+  P+
Sbjct:  400 KFGAFFASIPLPIFAGVYCILLGIVVAVGISFIQFTDTNSMRNMYVIGVSLFLSLSIAQYFLANTSRAGYGPVRTAGGWFNDILNTIFASAPLVATILATILDNTLEARHAS-DDARGIPWWKPFQHRNGDGRNDEFYSMPLRINELMPT 548          
The following BLAST results are available for this feature:
BLAST of CF838139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAT6_ARATH5.247e-8090.07Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH8.669e-7582.12Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH2.886e-7079.47Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH1.875e-6172.00Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH9.034e-4863.33Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
LPE1_MAIZE1.884e-4559.60Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT2_ARATH6.060e-4457.05Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT1_ARATH3.676e-4153.69Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT10_ARATH9.055e-4052.67Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT3_ARATH5.685e-3446.67Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05M24_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05M24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838139 ID=CF838139; Name=CF838139; organism=Citrus sinensis; type=EST; length=723bp
TTTTTTTTTTTTTTTTTGAAGAAAAAGCAANATATAATTGCCCTCTTATG
CTACTTCGAAATCCATCAGTCTCCGGGTTGGATTTCCCTAAAAGAAAAAA
ACAGTTCAACAAATGCTCTAAGGCACATCCTATAAAGGAAGGTACTATCT
TTTACTGCTATAGCGTGTAATAAGAGATTCACAAGAGAGCAATGATGATA
TTTTGTGTGTTCCCACAAGGACTTTTGGAAAACTTCCCAAAGAGAAATAC
ATGTTACCGATTGAATCACACAGATGGGAAATATTTGTTTAAATTGAAGG
GCAGGGAGTAAAATTCTTCACTTCTTGTGTCGCCTTTGAAGGACCAGAAC
TTGTCCCACCAATGCCTACCCCTGTCTTTCCTGACTTGACCATCCTTTTT
ATGCAGTGTGTTGTCAAGGAAAAATGCCACACAACCAGCAACAAATGGTT
CTGAGGAGAAAGGAACGTTTACCATATCGTTGAACCATCTTCCACTAGTG
TGAACTGGACCGAAACCATTAATGGCAGTGTACTCGTTGAAGTATTGGGG
CACAGACAGACCGATGAAGATAGAGAAGCCTAATATGAACTTTACTCGGA
AACTGTTGAGGTTACAGAACTGAAGGAAGCTAAGACCTCCAGCACCCACA
TATGCAAAGAAAAGGCAATATAAAGCAGCAACAATCGGTGCTGGAATTGA
AGCAAAGACTGCTCCAAATTTCC
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