CF838143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838143 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.701e-32 Identity = 67/96 (69.79%), Postives = 86/96 (89.58%), Query Frame = -1 Query: 396 EALAILAILASHQEGKTAIGQAEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQRID 683 EALAILAIL+++QEGKTAI +AE IPVL+E+IRTGSPRNRENAAA+LW +C G+ E+L +ARE+ A+ ALKEL+E+GTDRAKRKA S+LEL+Q+ + Sbjct: 529 EALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLELIQQTE 624
BLAST of CF838143 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22 Identity = 54/95 (56.84%), Postives = 70/95 (73.68%), Query Frame = -1 Query: 399 EALAILAILASHQEGKTAIGQAEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQRI 683 EALAILAIL+SH EGK IG ++ +P L+E IRTGSPRNRENAAAVL +C+GD + L A++L L +L+ +GTDR KRKA +LE + R+ Sbjct: 536 EALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRL 630
BLAST of CF838143 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = -1 Query: 402 EALAILAILASHQEGKTAIGQAEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIAR--ELDAEEALKELSESGTDRAKRKAGSILELLQR 683 EA+AIL+IL+SH EGK AIG AEP+PVL+E+I +G+PRNRENAAAV+ +C+G+ + +AR E L+EL+ +GTDR KRKA +LE + R Sbjct: 551 EAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
BLAST of CF838143 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = -1 Query: 402 EALAILAILASHQEGKTAIGQAEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIAR--ELDAEEALKELSESGTDRAKRKAGSILELLQR 683 EA+AIL+IL+SH EGK AIG AEP+PVL+E+I +G+PRNRENAAAV+ +C+G+ + +AR E L+EL+ +GTDR KRKA +LE + R Sbjct: 551 EAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
BLAST of CF838143 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.593e-19 Identity = 46/96 (47.92%), Postives = 71/96 (73.96%), Query Frame = -1 Query: 396 EALAILAILASHQEGKTAIGQAEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQRID 683 E+L+ILAIL+SH +GK+ +G A+ +PVL++ IR+GSPRN+EN+AAVL +C+ + + L A++L + L E++E+GTDR KRKA +L R + Sbjct: 541 ESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFN 636
BLAST of CF838143 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18 Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = -1 Query: 381 EALAILAILASHQEGKTAIGQAEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQRIDMAVNS 683 EAL IL++LAS+Q KTAI +A IP L++ ++ PRNRENAAA+L +C D E+L L A L ELS GT+RAKRKA S+LELL++ + S Sbjct: 527 EALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSSRKLGS 627
BLAST of CF838143 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17 Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = -1 Query: 402 EALAILAILASHQEGKTAIGQAEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQR 683 EAL IL++LA++Q+ K+AI +A +P L+ +++T RNRENAAA+L ++C D E+L L A L +LS++GT+R KRKA S+LELL++ Sbjct: 516 EALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLRK 609
BLAST of CF838143 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.937e-14 Identity = 40/94 (42.55%), Postives = 64/94 (68.09%), Query Frame = -1 Query: 402 EALAILAILASHQEGKTAIGQAEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQR 683 EAL+IL +LASH EG+ AIGQ I L+E IR G+P+N+E A +VL + + ++ + A + E L E++ SGT+RA+RKA ++++L+ + Sbjct: 563 EALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISK 656 The following BLAST results are available for this feature:
BLAST of CF838143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838143 ID=CF838143; Name=CF838143; organism=Citrus sinensis; type=EST; length=683bpback to top |