CF838144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838144 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.851e-41 Identity = 84/148 (56.76%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 295 EVLSRLVASVKEVSGLPECKNFFKKMHGNLVRRIKLLSPLFEELRDGNEGLSQEEIKGFELLRDALDSSVELLKSTNDGSKLYQCLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHD 738 E++SRLV SVKE+SG + F K+ G+LVRRI LLSP FEEL D N L +++I GFE +R ALDSS+EL +S N GSKL+Q RD + +F +T +IEAALS IPY+K+++SEEVREQ++L+H QF+RAK R + DLQL HD Sbjct: 11 ELMSRLVDSVKEISGFSSSRGFIGKIQGDLVRRITLLSPFFEELIDVNVELKKDQITGFEAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHD 158
BLAST of CF838144 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.088e-27 Identity = 61/149 (40.94%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 292 AEVLSRLVASVKEVSGLPECKNFFKKMHGNLVRRIKLLSPLFEELRDGNEGLSQEEIKGFELLRDALDSSVELLKSTNDGSKLYQCLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHD 738 A L+ V E++ + + + KK+ NL RR+KLL P+FEE+R+ NE +S++ +K L++A+ S+ + LK + GSK+Y ++R+++ ++ +++ ++E +LS IPY++LD+S+EVREQ+ELV QFRRAKGR D D +L D Sbjct: 6 ASAAQSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDELYED 154
BLAST of CF838144 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.508e-24 Identity = 64/156 (41.03%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 292 AEVLSRLVASVKEVS-----GLPECKNFFKKMHGNLVRRIKLLSPLFEELRDGN--EGLSQEEIKGFELLRDALDSSVELLKSTNDGSKLYQCLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHD 738 A + R+ A+V+ V+ G E +N +++ L RRI+LL P EELR+ EG +EE + L DAL++++ LL+ +GS++ L+RD + +F + Q+E AL DIPY++LD+S+EVREQ+ELVH Q +RAK R D PD + +D Sbjct: 21 AAAVERVAAAVEAVAAGAGAGAGEYRNAYRRQLLALSRRIRLLGPFVEELRERRRGEGEGEEEERALAPLADALEAALALLRLGREGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYND 176
BLAST of CF838144 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.508e-24 Identity = 64/156 (41.03%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 292 AEVLSRLVASVKEVS-----GLPECKNFFKKMHGNLVRRIKLLSPLFEELRDGN--EGLSQEEIKGFELLRDALDSSVELLKSTNDGSKLYQCLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHD 738 A + R+ A+V+ V+ G E +N +++ L RRI+LL P EELR+ EG +EE + L DAL++++ LL+ +GS++ L+RD + +F + Q+E AL DIPY++LD+S+EVREQ+ELVH Q +RAK R D PD + +D Sbjct: 21 AAAVERVAAAVEAVAAGAGAGAGEYRNAYRRQLLALSRRIRLLGPFVEELRERRRGEGEGEEEERALAPLADALEAALALLRLGREGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYND 176
BLAST of CF838144 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19 Identity = 50/132 (37.88%), Postives = 83/132 (62.88%), Query Frame = 1 Query: 310 LVASVKEVSGLPECKNFFKKMHGNLVRRIKLLSPLFEELRDGNEGLSQEEIKGFELLRDALDSSVELLKSTNDGSKLYQCLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGR 705 L+ S+ E++ + + KK NL RR+ LL P+ EE+RD E S E + ++ +L + +LL + SK+Y L+RD++ +F ++T +E ALS IPY+ L++S+E++EQ+ELV VQ RR+ G+ Sbjct: 13 LIDSINEIASISDSVTPMKKHCANLSRRLSLLLPMLEEIRDNQES-SSEVVNALLSVKQSLLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVELVLVQLRRSLGK 143
BLAST of CF838144 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12 Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 289 GAEVLSRLVASVKEVSGLPECKNFFKKMHGNLVRRIKLLSPLFEELRDGN--------EGLSQEEIKGFELLRDALDSSVELLKS-TNDGSKLYQCLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGR 705 GA L+ + E++ +P FKK +L RR+ LL+ L EE+RD + L+ E + L L ++ LL S T+ ++ +I+ QF +T ++E AL D+ YD+ D+S+EVREQ+EL +Q RRA R Sbjct: 4 GAITPDSLIGLIAEINEIPGNFGLFKKDCSDLARRVGLLTHLIEEIRDSSPPSESDASSSLNSHECDWWSDLVVGLQAAKRLLSSATSFQARESSDGAAKRISFQFQCVTWKLEKALGDLTYDRYDISDEVREQVELARLQLRRAMQR 151
BLAST of CF838144 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12 Identity = 43/148 (29.05%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 298 VLSRLVASVKEVSGLPECKNFFKKMHGNLVRRIKLLSPLFEELRDGNEGLSQEEIKGF-ELLRDALDSSVELLKSTNDGSKLYQCLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHD 738 ++S +V+ V+ + + + +K NLVRR+K+L P +E+R G K F LR ++ +LL++ ++GSK+Y L + + +FH + E++ L P+D+L +S + +++I+ + Q ++AK R D+ D++L D Sbjct: 53 LVSDIVSIVEFLDQINGYRRTQQKECFNLVRRLKILIPFLDEIR----GFESPSCKHFLNRLRKVFLAAKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQDIELAVD 196 The following BLAST results are available for this feature:
BLAST of CF838144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838144 ID=CF838144; Name=CF838144; organism=Citrus sinensis; type=EST; length=739bpback to top |