CF838145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838145 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.531e-28 Identity = 72/145 (49.66%), Postives = 92/145 (63.45%), Query Frame = -3 Query: 251 MLSHIT*QHGHLFKLQXXXXXXRVAIHSSQALSLMGRDLREAHLQVLLGGSGYRXXXXXXXXXXA-DPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 682 ML+HIT QHG+LFK + I SQALSL+ RDLREAHLQVLLGG G+R + DP LSS L+FP+S+ EE SK ++ +D S P W +S D SL+ EERE++ +Q + RA+FVQDLLL+TL D Sbjct: 84 MLNHITVQHGYLFKNRRRLRRF--VIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226
BLAST of CF838145 vs. ExPASy Swiss-Prot
Match: DI194_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica GN=DI19-4 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25 Identity = 71/145 (48.97%), Postives = 90/145 (62.07%), Query Frame = -3 Query: 251 MLSHIT*QHGHLFKLQXXXXXXRVAIHSSQALSLMGRDLREAHLQVLLGGSGYRXXXXXXXXXXADPFLSSLILNFPSSEAEEISK-SVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 682 +L HIT QH +LF+LQ RVA+ S+ ALSL GRDL+E +L+VLLG S R D LSSL+LN SSEAE+ +K S + E+ K P+ WK S D +LS EERE+R R+ A R+SFVQ LL+STL D Sbjct: 102 LLDHITLQHSYLFRLQRHHRLRRVAVPSNHALSLGGRDLQETYLKVLLGNSS-RSSGTNAASSVTDSLLSSLVLNLSSSEAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERERRRRRAAVRSSFVQHLLVSTLFDD 245
BLAST of CF838145 vs. ExPASy Swiss-Prot
Match: DI193_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.559e-22 Identity = 68/145 (46.90%), Postives = 85/145 (58.62%), Query Frame = -3 Query: 251 MLSHIT*QHGHLFKLQXXXXXXRVAIHSSQALSLMGRDLREAHLQVLLGGSG-YRXXXXXXXXXXADPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 682 ML+HIT QHG+LFK R I SQALSL+ RDLR+A LQ LLGG R ADP LSS L F + ++EE SK+ V +DTS P W++ D SL+ EERE++ +Q RA+FVQ L+LSTL D Sbjct: 104 MLNHITMQHGYLFK--SGRRMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDSEERSKAPVPIPDDTSIHKDTPAQPWESRIDSSLTSEEREQKRKQATDRATFVQGLVLSTLFED 246
BLAST of CF838145 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12 Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = -3 Query: 251 MLSHIT*QHGHLFKLQXXXXXXRVAIHSSQALSLMGRDLREAHLQVLLGGSGYRXXXXXXXXXXADPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 682 ++ H+T QHG FK+Q +++ S LSL+ +DLR+ LQ LGGS Y DPFLSSLI + P +E + S S+++ + P +PSLS +++++R A R+ FV+ L+LST+ D Sbjct: 96 LIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSY---VSNPPAAAPDPFLSSLICSLPVAEPSKDLHS--DSSDNNFLLNKFPDDKTAERAEPSLSEKDQKER----AQRSKFVRGLVLSTIFED 230 The following BLAST results are available for this feature:
BLAST of CF838145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838145 ID=CF838145; Name=CF838145; organism=Citrus sinensis; type=EST; length=684bpback to top |