CF838146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838146 vs. ExPASy Swiss-Prot
Match: DI194_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica GN=DI19-4 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.896e-28 Identity = 42/71 (59.15%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 14 MDSDFWTSRLAAAKRQYTLQQ---HHHQS----------SQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDI 187 MDSD W SRL AAKRQY LQ+ HHH + S +DR DD E ED+VRPDFPCPYCYED DI Sbjct: 1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGYDDVEPEDEVRPDFPCPYCYEDHDI 71 HSP 2 Score: 62.003 bits (149), Expect = 2.896e-28 Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 3 Query: 192 SLCSHLEDEHSCESKATVCPICSVKVARDMLSHITLRHGH 311 SLC+HLEDEH ESK CP+CS ++++D+L HITL+H + Sbjct: 73 SLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSY 112
BLAST of CF838146 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.179e-22 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 2 Query: 14 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDI 187 MDS+ W SRLAAAKR Y Q H DR +++ +++++VRP+F CPYCYED D+ Sbjct: 1 MDSEHWISRLAAAKRFYAAQLGH-----ADRAGMEEVDMDEEVRPEFACPYCYEDHDV 53 HSP 2 Score: 61.2326 bits (147), Expect = 1.179e-22 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 192 SLCSHLEDEHSCESKATVCPICSVKVARDMLSHITLRHGH 311 SLC+HLE+EH E A CPICS K+A+DML+HIT++HG+ Sbjct: 55 SLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGY 94
BLAST of CF838146 vs. ExPASy Swiss-Prot
Match: DI193_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.015e-16 Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 3 Query: 192 SLCSHLEDEHSCESKATVCPICSVKVARDMLSHITLRHGH 311 SLC+HLE++H E + CPIC K+ RDML+HIT++HG+ Sbjct: 75 SLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGY 114 HSP 2 Score: 50.447 bits (119), Expect = 1.015e-16 Identity = 30/74 (40.54%), Postives = 34/74 (45.95%), Query Frame = 2 Query: 14 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVR---------------PDFPCPYCYEDFDIA 190 MDS+ W S LAAAKR Y Q H + + E+EDD PD CPYCYED DIA Sbjct: 1 MDSEHWISSLAAAKRFYAAQLGHVDDMAGIGMEEVEMEMEDDGEGMELELEMQLEEATWPDVACPYCYEDHDIA 74
BLAST of CF838146 vs. ExPASy Swiss-Prot
Match: DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana GN=DI19-6 PE=1 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.018e-16 Identity = 21/40 (52.50%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 192 SLCSHLEDEHSCESKATVCPICSVKVARDMLSHITLRHGH 311 SLC H++++H ++K VCPIC+VKV+ DM++HITL+H + Sbjct: 57 SLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHAN 96 HSP 2 Score: 51.2174 bits (121), Expect = 1.018e-16 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 2 Query: 14 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDI 187 MDSD W+ RLA+A R+Y L S + L ++ E EDD R ++ CP+C + FDI Sbjct: 1 MDSDSWSDRLASASRRYQLD---FLSRSDNFLGFEEIEGEDDFREEYACPFCSDYFDI 55
BLAST of CF838146 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 6.756e-15 Identity = 20/40 (50.00%), Postives = 32/40 (80.00%), Query Frame = 3 Query: 192 SLCSHLEDEHSCESKATVCPICSVKVARDMLSHITLRHGH 311 SLC H++++H E+K VCP+C+V+V DM++HITL+H + Sbjct: 57 SLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHAN 96 HSP 2 Score: 46.9802 bits (110), Expect = 6.756e-15 Identity = 23/58 (39.66%), Postives = 34/58 (58.62%), Query Frame = 2 Query: 14 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDI 187 MDSD W+ RLA+A R+Y L S L ++ + E++ R +F CP+C + FDI Sbjct: 1 MDSDSWSDRLASATRRYQLA---FPSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDI 55
BLAST of CF838146 vs. ExPASy Swiss-Prot
Match: DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1 PE=1 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 1.029e-11 Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 3 Query: 195 LCSHLEDEHSCESKATVCPICSVKVARDMLSHITLRHG 308 LC H++DEH+ ESK VCP+CS+KV D+++HITL HG Sbjct: 49 LCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHITLHHG 86 HSP 2 Score: 31.187 bits (69), Expect = 1.029e-11 Identity = 9/27 (33.33%), Postives = 18/27 (66.67%), Query Frame = 2 Query: 107 LSIDDFEVEDDVRPDFPCPYCYEDFDI 187 + ++ + +DD + +F CP+C E +DI Sbjct: 20 MGFEEIDGDDDFQEEFACPFCAESYDI 46 The following BLAST results are available for this feature:
BLAST of CF838146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838146 ID=CF838146; Name=CF838146; organism=Citrus sinensis; type=EST; length=313bpback to top |