CF838148

Overview
NameCF838148
Unique NameCF838148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: SMT2_ARATH (24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana GN=SMT2 PE=1 SV=2)

HSP 1 Score: 394.815 bits (1013), Expect = 2.626e-109
Identity = 186/214 (86.92%), Postives = 203/214 (94.86%), Query Frame = 1
Query:  115 MDSLALFCTGALLAGGLYWFVCVLGPAEQKGKRAVNLSGGSISAEEVEDNYKEYWKFFKRPKET-TKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            MDSL LF TGAL+A G+YWF+CVLGPAE+KGKRAV+LSGGSISAE+V+DNYK+YW FF+RPKE  T EKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSH+DATRLHEEMAVDLI VK G +ILDVGCGVGGPMRAIA+HSRANVVGITINEYQVNRARLHNKKAGLD+LCEVVCGNFL+MPF+DN FDGAYSIEATCHAPKLE+VYAE+
Sbjct:    1 MDSLTLFFTGALVAVGIYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQVKPGQKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCGNFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEI 214          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: SMT3B_ARATH (24-methylenesterol C-methyltransferase 3 OS=Arabidopsis thaliana GN=SMT3 PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 4.060e-102
Identity = 170/214 (79.44%), Postives = 194/214 (90.65%), Query Frame = 1
Query:  115 MDSLALFCTGALLAGGLYWFVCVLGPAEQKGKRAVNLSGGSISAEEVEDNYKEYWKFFKRPKET-TKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            MDS+AL+CT  L+AG +YWF+CVLGPAE+KGKRA +LSGGSISAE+V+DNY +YW FF++PKE  + EKVPDFVDTFYNLVTDIYEWGWGQSFHFSP +PGKS +DATR+HEEMAVDLI VK G +ILD GCGVGGPMRAIAAHS+A V GITINEYQV RA+LHNKKAGLDSLC VVCGNFLKMPF++N FDGAYSIEATCHAPKLE+VY+E+
Sbjct:    1 MDSVALYCTAGLIAGAVYWFICVLGPAERKGKRASDLSGGSISAEKVKDNYNQYWSFFRKPKEIESAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPHVPGKSDKDATRIHEEMAVDLIKVKPGQKILDAGCGVGGPMRAIAAHSKAQVTGITINEYQVQRAKLHNKKAGLDSLCNVVCGNFLKMPFDENTFDGAYSIEATCHAPKLEEVYSEI 214          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: SMT2_ORYSJ (24-methylenesterol C-methyltransferase 2 OS=Oryza sativa subsp. japonica GN=Smt2-1 PE=2 SV=2)

HSP 1 Score: 322.783 bits (826), Expect = 1.268e-87
Identity = 151/202 (74.75%), Postives = 171/202 (84.65%), Query Frame = 1
Query:  163 LYWFVCVLGPAEQKGKRAVNLSGGSISAEEVEDNYKEYWKFFKRPKET-----TKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            +YWFV V+G AE KGKRAV+L  GSI+ ++V+D Y +YW FF+RPKET     + EKVP FVDTFYNLVTDIYEWGWGQSFHFSPS+PG+SHR+ATR+HEE   DL+  K G R+LDVGCGVGGPMRAIAAHS +NVVGITINEYQVNRAR HN+KAGLDS CEVVCGNFL MPF D  FDGAYSIEATCHAP+L+DVY EV
Sbjct:   18 VYWFVWVMGAAEVKGKRAVDLKMGSITNDKVKDKYTQYWSFFRRPKETATTEASAEKVPAFVDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHREATRVHEERVADLLQAKPGHRLLDVGCGVGGPMRAIAAHSGSNVVGITINEYQVNRARAHNRKAGLDSRCEVVCGNFLSMPFSDASFDGAYSIEATCHAPRLQDVYGEV 219          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: SMT1_ORYSJ (Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.591e-40
Identity = 78/178 (43.82%), Postives = 112/178 (62.92%), Query Frame = 1
Query:  229 GGSISAEEVE---DNYKEYWKFFKRPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            GG I+ +EV+   D Y++Y  ++   +E  K    D V+ +Y+L T  YE+GWG+SFHF+    G+S R++ + HE      + VK G ++LDVGCG+GGP+R IA  S A+V G+  NEYQ+ R +  N+ AG+   C+ V  +F+KMPF DN FD  Y+IEATCHAP     Y E+
Sbjct:   14 GGKITKDEVKSAVDEYEKYHGYYGGKEEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFDAVYAIEATCHAPDPVGCYKEI 191          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: SMT1_ARATH (Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.136e-38
Identity = 74/178 (41.57%), Postives = 107/178 (60.11%), Query Frame = 1
Query:  229 GGSISAEEV---EDNYKEYWKFFKRPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            GG I   +V    + Y++Y  F    +E  K    D V+ +Y+L T  YE+GWG+SFHF+    G+S R++ + HE      + ++ G ++LDVGCG+GGP+R IA  S + V G+  NEYQ+ R +  N+ AG+D  C  V  +F+KMPF +N FD  Y+IEATCHAP     Y E+
Sbjct:    8 GGKIDKSDVLTAVEKYEQYHVFHGGNEEERKANYTDMVNKYYDLATSFYEYGWGESFHFAQRWKGESLRESIKRHEHFLALQLGIQPGQKVLDVGCGIGGPLREIARFSNSVVTGLNNNEYQITRGKELNRLAGVDKTCNFVKADFMKMPFPENSFDAVYAIEATCHAPDAYGCYKEI 185          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: ERG6_CANGA (Sterol 24-C-methyltransferase OS=Candida glabrata GN=ERG6 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.402e-38
Identity = 79/190 (41.58%), Postives = 111/190 (58.42%), Query Frame = 1
Query:  193 AEQKGKRAVNLSGGSISAEEVEDNYKEYWKFFKRPKETTKEKVPDFVD---TFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            AE +      LS    +  E    Y  +W   K  KE    ++ D+ +   ++YN+VTD YE+GWG SFHFS    G++ + A   HE+    +  +K GD +LDVGCGVGGP R IA  +  N++G+  N+YQ+ +A+ + KK  L    + V G+F+ M FE N FD  Y+IEATCHAPKLE VY E+
Sbjct:   22 AESRTGLTALLSKNRNAQREAVSKYLRHWDG-KTDKEAEDRRLEDYNEATHSYYNVVTDFYEYGWGSSFHFSRFYKGENFQAAMARHEQYLAYMAGIKKGDLVLDVGCGVGGPARTIARFTGCNIIGLNNNDYQIQKAKYYAKKYNLQDHMDFVKGDFMNMEFEPNSFDKVYAIEATCHAPKLEGVYGEI 210          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: ERG6_MAGGR (Sterol 24-C-methyltransferase OS=Magnaporthe grisea GN=ERG6 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.572e-37
Identity = 82/173 (47.40%), Postives = 105/173 (60.69%), Query Frame = 1
Query:  259 DNYKEYWKFFKRPKETTK---EKVPDFVDT---FYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDS--LCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            D Y  +W       ETTK   E+  D+      +YNLVTD YE+GWGQSFHF    PG++   A   +E      I +K G ++LD+GCGVGGP R IA  + AN+ GITINEYQV RAR + +  G  +    + V G+F+ +PFE   FD  YSIEAT HAPKLEDVY ++
Sbjct:   55 DQYFRHWDGKTAKTETTKVREERKADYATLTRQYYNLVTDFYEYGWGQSFHFCTFAPGETFASAITRYEHTLAHRIGIKKGMKVLDIGCGVGGPARQIAKFTGANITGITINEYQVERARRYAEMEGYGAGEQLKFVQGDFMALPFEKETFDAVYSIEATVHAPKLEDVYKQI 227          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: SMT1_DICDI (Probable cycloartenol-C-24-methyltransferase 1 OS=Dictyostelium discoideum GN=smt1 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 76/173 (43.93%), Postives = 104/173 (60.12%), Query Frame = 1
Query:  247 EEVEDNYKEYWKFFK----RPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            ++V+D    Y + FK    +  +  K      V+TFY+L TD YE+GWGQSFHF+     +S   +   HE      + +  G +++D+GCGVGGPMR IA  S ANVVG+  NEYQ+ R +  N+ AGL  LC  +  +F+ +P EDN +D AY IEATCHAP L  +Y EV
Sbjct:   30 DKVDDTLNGYKELFKGNDDKAIQARKNNYTHMVNTFYDLATDFYEFGWGQSFHFATRHKYESFEASIARHEMYMAHQLGLFPGMKVIDIGCGVGGPMRTIARFSGANVVGLNNNEYQIQRGKRLNESAGLSHLCSFIKADFMHVPVEDNTYDCAYQIEATCHAPDLVGLYKEV 202          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: ERG6_YEAST (Sterol 24-C-methyltransferase OS=Saccharomyces cerevisiae GN=ERG6 PE=1 SV=4)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 1
Query:  223 LSGGSISAEEVEDNYKEYW--KFFKRPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            +S  + + +E    Y   W  +  K  +E   E   +   ++YN+VTD YE+GWG SFHFS    G+S   +   HE        ++ GD +LDVGCGVGGP R IA  +  NV+G+  N+YQ+ +A+ + KK  L    + V G+F+KM FE+N FD  Y+IEATCHAPKLE VY+E+
Sbjct:   32 MSKNNSAQKEAVQKYLRNWDGRTDKDAEERRLEDYNEATHSYYNVVTDFYEYGWGSSFHFSRFYKGESFAASIARHEHYLAYKAGIQRGDLVLDVGCGVGGPAREIARFTGCNVIGLNNNDYQIAKAKYYAKKYNLSDQMDFVKGDFMKMDFEENTFDKVYAIEATCHAPKLEGVYSEI 210          
BLAST of CF838148 vs. ExPASy Swiss-Prot
Match: ERG6_SCHPO (Sterol 24-C-methyltransferase OS=Schizosaccharomyces pombe GN=SPBC16E9.05 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.471e-35
Identity = 79/195 (40.51%), Postives = 115/195 (58.97%), Query Frame = 1
Query:  205 GKRAVNLSG-GSISAEEVEDNYK---EYWKFFKRPKETTKEK--------VPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEV 753
            GK A   +G  +I++++V++  +   EY++F+ R  E   E+            V+++Y+L TD+YE+GW QSFHFS    G++   +   HE      + +K G R+LDVGCGVGGP R I   +  N+VG+  N+YQ++R   +  K  LD     V G+F+ MPFEDN FD  Y+IEAT HAP LE VY E+
Sbjct:   21 GKAAEKKTGLAAIASKDVDEQSRKLQEYFEFWDRNHENESEEDRARRIDGYKSVVNSYYDLATDLYEYGWSQSFHFSRFYKGEAFAQSIARHEHYLAYRMGIKPGSRVLDVGCGVGGPAREITEFTGCNLVGLNNNDYQISRCNNYAVKRNLDKKQVFVKGDFMHMPFEDNTFDYVYAIEATVHAPSLEGVYGEI 215          
The following BLAST results are available for this feature:
BLAST of CF838148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
SMT2_ARATH2.626e-10986.9224-methylenesterol C-methyltransferase 2 OS=Arabid... [more]
SMT3B_ARATH4.060e-10279.4424-methylenesterol C-methyltransferase 3 OS=Arabid... [more]
SMT2_ORYSJ1.268e-8774.7524-methylenesterol C-methyltransferase 2 OS=Oryza ... [more]
SMT1_ORYSJ2.591e-4043.82Cycloartenol-C-24-methyltransferase 1 OS=Oryza sat... [more]
SMT1_ARATH4.136e-3841.57Cycloartenol-C-24-methyltransferase OS=Arabidopsis... [more]
ERG6_CANGA5.402e-3841.58Sterol 24-C-methyltransferase OS=Candida glabrata ... [more]
ERG6_MAGGR1.572e-3747.40Sterol 24-C-methyltransferase OS=Magnaporthe grise... [more]
SMT1_DICDI1.331e-3643.93Probable cycloartenol-C-24-methyltransferase 1 OS=... [more]
ERG6_YEAST1.331e-3642.46Sterol 24-C-methyltransferase OS=Saccharomyces cer... [more]
ERG6_SCHPO1.471e-3540.51Sterol 24-C-methyltransferase OS=Schizosaccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05N05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05N05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838148 ID=CF838148; Name=CF838148; organism=Citrus sinensis; type=EST; length=754bp
AGGCCGAGTCCGCCTTTGCTTTTTCTCTCTCTCACACACACACACACACA
CACACACAACACAGTCACGCTCTCGCACTCCATCTCTCTCTCCTTCTAAC
TTTTTCAAGTCTCAATGGATTCTCTCGCTCTCTTTTGCACCGGCGCTCTC
CTTGCCGGTGGCCTCTACTGGTTTGTCTGCGTACTCGGCCCCGCCGAACA
AAAGGGCAAGCGCGCCGTCAACCTCTCCGGCGGCTCGATCTCCGCCGAGG
AAGTCGAAGACAATTATAAAGAGTACTGGAAGTTCTTTAAACGCCCGAAG
GAGACAACCAAGGAGAAGGTTCCAGATTTCGTCGACACGTTTTACAACTT
AGTCACAGACATTTACGAGTGGGGGTGGGGCCAGTCCTTCCACTTCTCCC
CCTCTATCCCCGGGAAATCCCACCGTGACGCCACGCGCCTCCACGAGGAG
ATGGCCGTCGATCTCATTGACGTCAAGGCCGGAGACCGCATTCTCGACGT
CGGATGCGGGGTCGGCGGTCCCATGCGTGCCATCGCCGCCCACTCGCGTG
CCAATGTCGTCGGCATCACAATCAACGAGTATCAAGTGAATCGTGCTCGT
CTGCACAACAAGAAGGCGGGATTAGATTCTCTCTGCGAAGTAGTATGCGG
AAACTTCCTAAAGATGCCGTTTGAAGACAACCACTTCGACGGCGCGTACT
CAATCGAAGCGACATGTCACGCGCCGAAGCTGGAGGACGTGTACGCTGAG
GTCT
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