CF838213

Overview
NameCF838213
Unique NameCF838213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF838213 vs. ExPASy Swiss-Prot
Match: DR206_PEA (Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11
Identity = 50/146 (34.25%), Postives = 72/146 (49.32%), Query Frame = -2 
Query:  167 YWHDI-YSGSNPTAV--AVVAAPQKNSSTL------FGAISMIDDPLTEGPELSSKLVGKAQGFYASAARDENGLMMVMNFAFMEGKYNGSPISVLGRNKVFSPMREMPVIGGSGLFRFARGYVEARTHKFDATTGDATVEYNIYV 577
            Y+HDI Y+G N      A+VAAP+  S T       FG I + DDP+T    LSSK VG+AQGFY    ++     +   F      + G+ I+  G + + +  R++ V GG+G F   RG     T   DA  G+A     +Y+
Sbjct:   37 YFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGT-ITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITT---DAFEGEAYFRLGVYI 178
The following BLAST results are available for this feature:
BLAST of CF838213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DR206_PEA2.903e-1134.25Disease resistance response protein 206 OS=Pisum s... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_05P03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838213 ID=CF838213; Name=CF838213; organism=Citrus sinensis; type=EST; length=701bp
TTTTTTTTTTTTTTTTTAAATCAACACCAACGATTTTATTTAACTCAATC
AAAACAGACCAGCAATGTGGTTAGAAATTATGCATCCTCCATTAGAAGAG
AACAAATATATATTTATTCAAGCAAAAATATCAAAATTAGCCTAGCACGC
ATCATCAATAATGCAACACATAAATATTGTATTCAACTGTTGCATCTCCA
GTTGTAGCATCAAACTTATGAGTTCTAGCCTCAACGTACCCTCTAGCAAA
CCGGAAAAGCCCGCTTCCGCCGATCACCGGCATCTCCCTCATCGGCGAAA
ACACCTTATTCCTCCCCAATACACTTATTGGGCTTCCATTATACTTTCCT
TCCATGAAAGCAAAATTCATTACCATCATCAAACCATTTTCATCTCGCGC
AGCAGATGCATAAAACCCTTGCGCCTTTCCCACCAATTTCGAGCTCAATT
CGGGCCCTTCGGTCAACGGATCATCAATCATGCTTATGGCACCGAACAAT
GTCGATGAATTCTTCTGCGGCGCCGCCACCACTGCCACTGCTGTAGGGTT
GCTGCCGCTATAGATGTCGTGCCAATAGAGTCTAAAGTGGCTCAACTTTT
CTTCCTTGAGGCGAAAAAAGTTCTTGTCTAGGGTTGTCGCATAACCGTAG
CTTTGATTAGAGAAAGAAAATAGGAAGAAGATGATGATCTGAGAAGCTAA
C
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