CF838214

Overview
NameCF838214
Unique NameCF838214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF838214 vs. ExPASy Swiss-Prot
Match: DR206_PEA (Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 52/147 (35.37%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:  200 YWHDI-YSGSNPTAV--AVVAAPQKNSSTL------FGAISMIDDPLTEGPELSSKLVGKAQGFYASAARDENGLMMVMNFAF-MEGKYNGSTISVLGRNKVFSPMREMPVIGGSGLFRFARGYVEARTHKFDATTGDATVEYNIYV 610
            Y+HDI Y+G N      A+VAAP+  S T       FG I + DDP+T    LSSK VG+AQGFY    +  N     ++F F +   ++  TI+  G + + +  R++ V GG+G F   RG     T   DA  G+A     +Y+
Sbjct:   37 YFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQVGRAQGFYIYDTK--NTYTSWLSFTFVLNSTHHQGTITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITT---DAFEGEAYFRLGVYI 178
The following BLAST results are available for this feature:
BLAST of CF838214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DR206_PEA1.176e-1135.37Disease resistance response protein 206 OS=Pisum s... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_05P03_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838214 ID=CF838214; Name=CF838214; organism=Citrus sinensis; type=EST; length=770bp
TTGGTCACTATCTATTATGCATGCAGAAGCAAGCGACCTGTAATATATCA
CAACAATGGCTAGGGTTTTCCCCTTGTTAGCTTCTCAGATCATCATCTTC
TTCCTATTTTCTTTCTCTAATCAAAGCTACGGTTATGCGACAACCCTAGA
CAAGAACTTTTTTCGCCTCAAGGAAGAAAAGTTGAGCCACTTTAGACTCT
ATTGGCACGACATCTATAGCGGCAGCAACCCTACAGCAGTGGCAGTGGTG
GCGGCGCCGCAGAAGAATTCATCGACATTGTTCGGTGCCATAAGCATGAT
TGATGATCCGTTGACCGAAGGGCCCGAATTGAGCTCGAAATTGGTGGGAA
AGGCGCAAGGGTTTTATGCATCTGCTGCGCGAGATGAAAATGGTTTGATG
ATGGTAATGAATTTTGCTTTCATGGAAGGAAAGTATAATGGAAGCACAAT
AAGTGTATTGGGGAGGAATAAGGTGTTTTCGCCGATGAGGGAGATGCCGG
TGATCGGCGGAAGCGGGCTTTTCCGGTTTGCTAGAGGGTACGTTGAGGCT
AGAACTCATAAGTTTGATGCTACAACTGGAGATGCAACAGTTGAATACAA
TATTTATGTGTTGCATTATTGATGATGCGTGCTAGGCTAATTTTGATATT
TTTGCTTGAATAAATATATATTTGTTCTCTTCTAATGGAGGATGCATAAT
TTCTAACCACATTGCTGGTCTGTTTTGATTGATTTAAATAAAATCGTTGG
TGTTGATTTAAAAAAAAAAA
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