CF838217

Overview
NameCF838217
Unique NameCF838217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF838217 vs. ExPASy Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii GN=cp12 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.635e-15
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 3 
Query:  225 ISEKVEQSIKSAQEACEGDPASGECAAAWDEVEELSAAASHARERKKD----SDPLEAYCKDNPETDECRTYED 434
            +++KV+ ++K A++AC     S +CA AWD VEELSAA SH ++  K     +DPLEA+CKD P+ DECR YED
Sbjct:    8 LNKKVQDAVKEAEDAC-AKGTSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 80
The following BLAST results are available for this feature:
BLAST of CF838217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CP12_CHLRE4.635e-1551.35Calvin cycle protein CP12 OS=Chlamydomonas reinhar... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_05P05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838217 ID=CF838217; Name=CF838217; organism=Citrus sinensis; type=EST; length=632bp
ACGCTAGCCAAAACAACAAAATAGAAGAAGAGCAAGAGGCGAGCATGGCA
ACAATAGCCGGTGTCAATCTCTCAACTCCCAGCGTCTTTGCCAAAATCAC
AGACCCGAAGTCAAAGGTTCAACCCAGCAGGTCTCTGTGGCTCAACAACC
CATCAAGGAAAAGGCCCGCTCAGTTTAGAACAGGGCGCATGCACATGCAA
CCCCTGAGAGCTGCTCCCGATAGAATCTCAGAGAAGGTGGAGCAAAGCAT
CAAGAGTGCACAGGAGGCGTGCGAGGGGGACCCTGCTAGTGGCGAGTGTG
CTGCTGCATGGGACGAGGTGGAGGAGCTGAGTGCCGCGGCCAGCCATGCT
AGAGAGAGGAAGAAGGATTCCGATCCTTTGGAGGCTTACTGTAAGGACAA
CCCAGAGACCGATGAGTGCCGCACTTATGAAGATTGATAACATCGTCGTT
ATGCTCTTTTAATTATGTTTTTTTTTTCTCCTTTTTAAGTCCTTGGATGT
TGTTATGTGATGGGATCGTGATGTTTTGGTCACCTTGATATTCATATACT
ACAATACCATATGGAGACTTGAATGATAAATAGTTCCTCTGATTTTTACC
GGTTATGTTTCAATCGCATCTTTTATGTTAAA
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