CF838219

Overview
NameCF838219
Unique NameCF838219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OPR1_SOLLC (12-oxophytodienoate reductase 1 OS=Solanum lycopersicum GN=OPR1 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.689e-67
Identity = 118/153 (77.12%), Postives = 136/153 (88.89%), Query Frame = -3
Query:  264 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPFLNT 722
            IVEAV+NEIG+DRVGIR+SPFA+Y E+GD+NP ALGLYM ESLNKY + YCH+VEPRMKT  EK EC  SL+P MRKA+KGTF+VAGGYDREDGN+A+ E RADLV YGRLF++NPDLP+RFE NAPLNKYNR+TFY SDP+VGYTDYPFL T
Sbjct:  223 IVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVP-MRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLET 374          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OPR2_ARATH (12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=2 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 2.528e-66
Identity = 117/155 (75.48%), Postives = 138/155 (89.03%), Query Frame = -3
Query:  258 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPFLNTSS 722
            +V+AV+ EIG DRVGIRLSPFA+YMESGD+NPEALGLYM ESLNKYGILYCHM+EPRMKTVGE + C H+L+P MR+AFKGTF+ AGG+ REDGN+A+A+GR DLV YGR FLANPDLP+RF+ +APLNKYNR TFY SDPVVGYTDYP L +++
Sbjct:  221 VVDAVAKEIGPDRVGIRLSPFADYMESGDTNPEALGLYMVESLNKYGILYCHMIEPRMKTVGEIAACSHTLMP-MREAFKGTFISAGGFTREDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSLESTA 374          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OPR1_ARATH (12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.140e-65
Identity = 116/155 (74.84%), Postives = 138/155 (89.03%), Query Frame = -3
Query:  258 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPFLNTSS 722
            IV+AV+ EIG DRVGIRLSPFA+YMESGD+NP ALGLYMAESLNKYGILYCH++E RMKT+GE   CPH+L+P MRKAFKGTF+ AGG+ REDGN+A+++GR DLV YGR FLANPDLP+RF+ +APLNKY+R TFY SDPVVGYTDYPFL +++
Sbjct:  219 IVDAVAKEIGPDRVGIRLSPFADYMESGDTNPGALGLYMAESLNKYGILYCHVIEARMKTMGEVHACPHTLMP-MRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFLESTA 372          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OPRL1_ARATH (Putative 12-oxophytodienoate reductase-like protein 1 OS=Arabidopsis thaliana GN=At1g09400 PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.187e-53
Identity = 100/130 (76.92%), Postives = 113/130 (86.92%), Query Frame = -3
Query:  333 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNK 722
            ++EAVS EIG DRVGIRLSPFA+YMESGD++P+ LGLYMA+SLN++ ILYCHM+EPRMKTV E  EC  S L PMR AF GTF+VAGGY REDGNKA+AEGR DLV YGRLFLANPDLP+RFE NAPLNK
Sbjct:  196 VIEAVSKEIGPDRVGIRLSPFADYMESGDTDPKRLGLYMAKSLNRFEILYCHMIEPRMKTVSEIFECRES-LTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTDLVAYGRLFLANPDLPKRFELNAPLNK 324          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OPRL_SOLLC (12-oxophytodienoate reductase-like protein OS=Solanum lycopersicum GN=OPR2 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.013e-47
Identity = 93/155 (60.00%), Postives = 114/155 (73.55%), Query Frame = -3
Query:  258 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPFLNTSS 722
            IVEAV+NEIGAD++GI+LSPF       DSN EAL  YMA  L+K G+LY H++EPR        E  +  L P+RKAFKGT + +GGY + DG KAI E  ADL+ +GR+FLANPDLP+RFE NAPLNKYNR TFY +DP++GYTDYPFL  +S
Sbjct:  212 IVEAVANEIGADKIGIKLSPFDG---KKDSNSEALATYMANELSKLGVLYLHVMEPR--------ETVNRSLLPIRKAFKGTLIASGGYGKSDGEKAIDENYADLISFGRMFLANPDLPKRFEVNAPLNKYNRSTFYTNDPIIGYTDYPFLEVAS 355          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OPR3_SOLLC (12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.545e-39
Identity = 83/164 (50.61%), Postives = 112/164 (68.29%), Query Frame = -3
Query:  270 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGI------LYCHMVEPRMKTVGE-------KSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPFL 722
            +V+AV + IGADRVG+R+SP  +++++ DSNP +LGL + E LNK  +       Y H+ +PR    G+         E    L+  +R A++GTF+ +GGY RE G +A+A+G ADLV YGRLF++NPDL  R + NAPLNKYNR+TFY  DPVVGYTDYPFL
Sbjct:  221 VVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYPFL 384          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OPR3_ARATH (12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.937e-35
Identity = 75/164 (45.73%), Postives = 107/164 (65.24%), Query Frame = -3
Query:  270 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYG------ILYCHMVEPRMKTVGE-------KSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPFL 722
            +VE V + IGA +VG+R+SP  +++++ DS+P +LGL +   LNK        + Y H+ +PR    G+         E    L+  +R A+ GTF+ +GG+++E G +A+ +G ADLV YGRLF+ANPDL  RF+ +  LNKYNR+TFY  DPVVGYTDYPFL
Sbjct:  222 VVEGVVSAIGASKVGVRVSPAIDHLDATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYTQDPVVGYTDYPFL 385          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OYEA_SCHPO (Putative NADPH dehydrogenase C5H10.04 OS=Schizosaccharomyces pombe GN=SPAC5H10.04 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 63/151 (41.72%), Postives = 90/151 (59.60%), Query Frame = -3
Query:  273 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGIL-YCHMVEPRMKTVGEKSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPF 722
            ++EAV+ +IG +RVG R+SPF+ +M+  D     + L M+E   ++  L Y H +EPR    G K          ++K +KG F+ AGGYD E   +A  E R  LV +GR F+ANPDL  R + + PLNK++R +FY+     GYTDYPF
Sbjct:  226 VLEAVTRKIGQERVGYRISPFSGWMQKIDFMEVNIYL-MSEIAKRFPKLAYIHAIEPRKYWSGHKLVSSEQNTSFLQKYWKGPFITAGGYDPETAVQAANE-RGVLVAFGRNFIANPDLVFRIKHHIPLNKWDRSSFYLPKTEKGYTDYPF 374          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: OYEB_SCHPO (Putative NADPH dehydrogenase C5H10.10 OS=Schizosaccharomyces pombe GN=SPAC5H10.10 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20
Identity = 55/150 (36.67%), Postives = 80/150 (53.33%), Query Frame = -3
Query:  273 IVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPF 722
            ++E+V N IG +RVG R+SPF++  +  DS    + +          + Y H +EPR    G             +  +   F+ AGG+DR+   + +AE    LV +GR FL+NPDLP R ++N PLNK++R TFY      GY DYPF
Sbjct:  233 LLESVVNAIGQERVGYRISPFSDIWKDKDSFEAHVFMIKKIKERFPNLAYLHAIEPRQYWNGHVHITQEKNTLIYKNLWGDPFITAGGHDRDSAIQ-MAEQENTLVAFGRYFLSNPDLPFRLKYNLPLNKWDRATFYTKMSPKGYIDYPF 381          
BLAST of CF838219 vs. ExPASy Swiss-Prot
Match: NEMA_ECOLI (N-ethylmaleimide reductase OS=Escherichia coli (strain K12) GN=nemA PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.955e-19
Identity = 59/152 (38.82%), Postives = 78/152 (51.32%), Query Frame = -3
Query:  270 IVEAVSNEIGADRVGIRLSPFANYMESGDS-NPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYPFL 722
            +V+A   E GADR+GIR+SP   +  + +  N EA  LY+ E L K GI Y HM EP        ++   +    +R  F G  + AG Y  E     I +G  D V +GR ++ANPDL  R +  A LN    E+FY      GYTDYP L
Sbjct:  218 VVDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDWAGGEPYTD---AFREKVRARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFY-GGGAEGYTDYPTL 365          
The following BLAST results are available for this feature:
BLAST of CF838219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
OPR1_SOLLC8.689e-6777.1212-oxophytodienoate reductase 1 OS=Solanum lycoper... [more]
OPR2_ARATH2.528e-6675.4812-oxophytodienoate reductase 2 OS=Arabidopsis tha... [more]
OPR1_ARATH2.140e-6574.8412-oxophytodienoate reductase 1 OS=Arabidopsis tha... [more]
OPRL1_ARATH4.187e-5376.92Putative 12-oxophytodienoate reductase-like protei... [more]
OPRL_SOLLC2.013e-4760.0012-oxophytodienoate reductase-like protein OS=Sola... [more]
OPR3_SOLLC1.545e-3950.6112-oxophytodienoate reductase 3 OS=Solanum lycoper... [more]
OPR3_ARATH3.937e-3545.7312-oxophytodienoate reductase 3 OS=Arabidopsis tha... [more]
OYEA_SCHPO3.457e-2341.72Putative NADPH dehydrogenase C5H10.04 OS=Schizosac... [more]
OYEB_SCHPO3.577e-2036.67Putative NADPH dehydrogenase C5H10.10 OS=Schizosac... [more]
NEMA_ECOLI3.955e-1938.82N-ethylmaleimide reductase OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05P07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838219 ID=CF838219; Name=CF838219; organism=Citrus sinensis; type=EST; length=724bp
TTTTTTTTTTTTTTTTTGACACCATAATGCTTTGTTTTTCTTATATCCTT
GTGATTTTGAGAATAGCAGTCTCAATTGGAATTAGAGAGAGAGTGAATGT
GAAACATAGGCATAGCCTTGGCCTTACGCCATTACAATTTTACTGAGATA
AACTATACTGGCTTTTACATTCACACGCTACATCAATAAAAATTCAGAAA
ACAAGATTAAATCTGAGAGAATGCTTTATCAATCTAATGCTTTTTCTTGG
TAACATAAGAAGAGGTGTTGAGAAAGGGATAATCCGTGTAACCAACAACA
GGATCGGAAACATAGAATGTTTCTCTGTTGTACTTATTGAGGGGGGCATT
GAACTCAAATCTCCTGGGTAAATCTGGATTAGCCAAGAACAAGCGACCAT
AAACAACAAGATCTGCACGGCCTTCAGCAATAGCTTTGTTTCCATCTTCC
CTGTCATAACCCCCAGCGACAAGAAAAGTACCCTTGAAAGCCTTTCTCAT
GGGGGGCAGCAAACTGTGAGGACATTCAGATTTTTCTCCAACTGTTTTCA
TCCTCGGCTCAACCATGTGACAATAGAGGATACCATATTTGTTCAAGGAT
TCTGCCATGTAAAGACCTAAAGCTTCTGGGTTAGAGTCTCCTGATTCCAT
ATAGTTTGCAAACGGAGATAGTCTTATCCCAACCCTATCTGCCCCTATTT
CATTGGAAACAGCTTCAACTATTT
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