CF838220

Overview
NameCF838220
Unique NameCF838220
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OPR2_ARATH (12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=2 SV=2)

HSP 1 Score: 404.06 bits (1037), Expect = 4.845e-112
Identity = 190/235 (80.85%), Postives = 213/235 (90.64%), Query Frame = 1
Query:  103 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQIRTNGVDIAQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 807
            +PL+TPY MG  NLSHRVVLAPLTRQ+SY +VPQPHAILYYSQRT+ GG LIAEATGVSDTAQGYPDTPGIWTKE VEAWKPIVDAVHAKGGIFFCQI HVGRVSN+ +QP  QAPISCT KP+  Q+R NG+D A+FTPPRRL   EIP IVNDFRLAARNA+EAGFDG+E+HGAHG+LIDQFMKD+VNDRTD+YGGSL+NRC+FALE+V+AV+ EIG DRVGIRLSPFA+YME
Sbjct:   12 VPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNRGFQPRRQAPISCTGKPIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFDGVEIHGAHGYLIDQFMKDKVNDRTDEYGGSLQNRCKFALEVVDAVAKEIGPDRVGIRLSPFADYME 246          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OPR1_ARATH (12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2)

HSP 1 Score: 401.364 bits (1030), Expect = 3.140e-111
Identity = 191/235 (81.28%), Postives = 210/235 (89.36%), Query Frame = 1
Query:  103 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQIRTNGVDIAQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 807
            +PL+TPY MG  NLSHRVVLAPLTRQRSY NVPQPHA +YYSQRTT GG LI EATGVSDTAQGY DTPGIWTKE VEAWKPIVDAVHAKGGIFFCQI HVGRVSN  +QPNG+APISC+DKPL  QIR+NG+D A FTPPRRL   EIP IVNDFRLAARNA+EAGFDG+E+HGA+G+LIDQFMKD VNDRTD+YGGSL+NRC+F LEIV+AV+ EIG DRVGIRLSPFA+YME
Sbjct:   10 VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCSDKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRCKFPLEIVDAVAKEIGPDRVGIRLSPFADYME 244          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OPR1_SOLLC (12-oxophytodienoate reductase 1 OS=Solanum lycopersicum GN=OPR1 PE=1 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 1.117e-108
Identity = 187/235 (79.57%), Postives = 211/235 (89.79%), Query Frame = 1
Query:  103 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQIRTNGVDIAQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 807
            IPL++P  MG   L HRVVLAPLTRQRSY  +PQPHAIL+YSQR+T GGLLI EAT +S+T  GY D PGIWTKEQVEAWKPIVDAVHAKGGIFFCQI HVGRVSN+D+QPNG+ PISCTD+ LT QIR+NG+DIA FT PRRL T EIPQIVN+FR+AARNAIEAGFDG+E+HGAHG+LIDQFMKDQVNDR+D+YGGSLENRCRFALEIVEAV+NEIG+DRVGIR+SPFA+Y E
Sbjct:   14 IPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIRSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNE 248          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OPRL2_ARATH (Putative 12-oxophytodienoate reductase-like protein 2 OS=Arabidopsis thaliana GN=At1g17990 PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 2.334e-98
Identity = 173/235 (73.62%), Postives = 202/235 (85.96%), Query Frame = 1
Query:  103 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQIRTNGVDIAQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 807
            IPL+ PY MG  NLSHRVVLAPLTR RSY N+PQP+A LYY+QRTT GGLLI+E+  VS+T+ GYPD PG+W ++QVEAWKPIVDAVH+KGGIFFCQI H GRV +QD QPNG+AP+S TDKPL  +    G    QF PPRRL + E+P IVNDFR+AARNAIEAGFDG+E+HGAHG+LIDQF+KD+VNDR+DQYGGSLENRCRFALE++EAV NEIG+DRVGIRLSPFA+YME
Sbjct:    7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSETSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPNGEAPVSSTDKPLMCKNMYGG----QFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQFLKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYME 236          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OPRL1_ARATH (Putative 12-oxophytodienoate reductase-like protein 1 OS=Arabidopsis thaliana GN=At1g09400 PE=2 SV=2)

HSP 1 Score: 345.895 bits (886), Expect = 1.566e-94
Identity = 162/227 (71.37%), Postives = 187/227 (82.38%), Query Frame = 1
Query:  127 MGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQIRTNGVDIAQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 807
            M + NL+HR+V+AP+ R RSY N+PQPH  LYY QRTT GGLLI+EATGVS+TA  Y + PGIW KEQ+EAWKPIVDAVH+ GGIFFCQ+ H GRVS+QD QPNG++P+S TDKP             +FTPPRRL T EIP I+NDFRLAARNA EAGFDG+E+HGAHG+LIDQFMKD VNDRTD YGGSLENRCRFAL+++EAVS EIG DRVGIRLSPFA+YME
Sbjct:    1 MKNFNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAYQNMPGIWRKEQIEAWKPIVDAVHSHGGIFFCQLWHAGRVSHQDCQPNGESPVSSTDKPFADDPSN------EFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKDSVNDRTDSYGGSLENRCRFALQVIEAVSKEIGPDRVGIRLSPFADYME 221          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OPR3_SOLLC (12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3 PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.020e-77
Identity = 139/240 (57.92%), Postives = 179/240 (74.58%), Query Frame = 1
Query:  106 PLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQIR------TNGVDIAQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 807
            PL +PY MG  NLSHRVVLAP+TR R+ NN+PQ     YY QR T GG LI E T +S T+ G+P  PGI+TKEQV  WK IVD VHAKG + FCQ+ HVGR S++ YQP G APIS T+KP++++ R      T+G+    +  PR + TYEI Q+V D+R +A NAIEAGFDGIE+HGAHG+LIDQF+KD +NDRTD+YGGSL NRC+F  ++V+AV + IGADRVG+R+SP  ++++
Sbjct:   11 PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGI----YPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLD 246          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OPR3_ARATH (12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3 PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 1.092e-71
Identity = 131/237 (55.27%), Postives = 173/237 (73.00%), Query Frame = 1
Query:  109 LVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQ----IRTNGVDIAQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 807
            L + Y MG  +LSHRVVLAP+TR R+ N VP      YY+QRTT GG LI+E T VS  + G+P  PGI++ EQVEAWK +V+AVHAKGG  FCQ+ HVGR S+  YQPNG +PIS T+KP++      +  +G  + ++  PR L   EIP++V D+ L+A NAI AGFDGIE+HGAHG+LIDQF+KD +NDRTDQYGGS+ NRCRF  ++VE V + IGA +VG+R+SP  ++++
Sbjct:   12 LFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHV-KYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLD 247          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OPRL_SOLLC (12-oxophytodienoate reductase-like protein OS=Solanum lycopersicum GN=OPR2 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.210e-62
Identity = 125/232 (53.88%), Postives = 159/232 (68.53%), Query Frame = 1
Query:  103 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQIRTNGVDIAQFTP-PRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAH-GFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPF 792
            +PL TPY +G   L+HR+V   LTR RS NN PQ H   YYSQR T GGL+I+EA   SD ++  P+ PGIW +EQVEAWKP+V+ VH KGG+FFCQI H GR+S           +S     +     T   D     P P  L + +IP IVNDFR+AARNAI+AGFDGIE++ +  G+LID+FM DQV+  TD+Y  S+++RCR ALEIVEAV+NEIGAD++GI+LSPF
Sbjct:    9 VPLCTPYKLGRFKLTHRIVFPALTRNRSQNNTPQSHLTEYYSQRATNGGLIISEAAAASDISKECPNLPGIWNEEQVEAWKPVVNGVHEKGGVFFCQIWHSGRLS--------VPTVSALFFSIGIGWSTRPDDKVYAKPTPLPLESDKIPCIVNDFRIAARNAIKAGFDGIEINASSGGYLIDEFMNDQVHGWTDEYDESIKDRCRLALEIVEAVANEIGADKIGIKLSPF 232          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: NEMA_ECOLI (N-ethylmaleimide reductase OS=Escherichia coli (strain K12) GN=nemA PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.141e-51
Identity = 113/239 (47.28%), Postives = 149/239 (62.34%), Query Frame = 1
Query:  109 LVTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTHQIRT-----NGVDI-AQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 801
            L +P  +G++  ++R+ +APLTR RS    ++P P    YY QR +  GL+I+EAT +S  A+GY   PGI + EQ+ AWK I   VHA+ G    Q+ H GR+S+   QP GQAP++     L+   RT     NG  I  + + PR L   EIP IVNDFR A  NA EAGFD +ELH AHG+L+ QF+    N RTDQYGGS+ENR R  LE+V+A   E GADR+GIR+SP   +
Sbjct:    6 LYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRAS-AGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAPVA--PSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEVVDAGIEEWGADRIGIRVSPIGTF 241          
BLAST of CF838220 vs. ExPASy Swiss-Prot
Match: OYE3_YEAST (NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae GN=OYE3 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.714e-38
Identity = 90/239 (37.66%), Postives = 135/239 (56.49%), Query Frame = 1
Query:  109 LVTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPH-AILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPL----THQIRTNGVDIAQFTPPRRLMTYEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 801
            L  P  +G+  L+HR V+ PLTR R+ +  N+P    A +YY QR  + G ++I E T +S  A GY + PGIW+ EQV  WK I  A+H      + Q+  +G  S  D          C    +    T Q +    +  + +    L   +I Q + D+  AA+N+I AG DG+E+H A+G+L++QF+    N RTD+YGG++ENR RF LE+V+A+   IG +RVG+RLSP+  +
Sbjct:   17 LFEPIKIGNTQLAHRAVMPPLTRMRATHPGNIPNKEWAAVYYGQRAQRPGTMIITEGTFISPQAGGYDNAPGIWSDEQVAEWKNIFLAIHDCQSFAWVQLWSLGWASFPDVLARDGLRYDCASDRVYMNATLQEKAKDANNLEHS----LTKDDIKQYIKDYIHAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNKRTDEYGGTIENRARFTLEVVDALIETIGPERVGLRLSPYGTF 251          
The following BLAST results are available for this feature:
BLAST of CF838220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
OPR2_ARATH4.845e-11280.8512-oxophytodienoate reductase 2 OS=Arabidopsis tha... [more]
OPR1_ARATH3.140e-11181.2812-oxophytodienoate reductase 1 OS=Arabidopsis tha... [more]
OPR1_SOLLC1.117e-10879.5712-oxophytodienoate reductase 1 OS=Solanum lycoper... [more]
OPRL2_ARATH2.334e-9873.62Putative 12-oxophytodienoate reductase-like protei... [more]
OPRL1_ARATH1.566e-9471.37Putative 12-oxophytodienoate reductase-like protei... [more]
OPR3_SOLLC1.020e-7757.9212-oxophytodienoate reductase 3 OS=Solanum lycoper... [more]
OPR3_ARATH1.092e-7155.2712-oxophytodienoate reductase 3 OS=Arabidopsis tha... [more]
OPRL_SOLLC1.210e-6253.8812-oxophytodienoate reductase-like protein OS=Sola... [more]
NEMA_ECOLI2.141e-5147.28N-ethylmaleimide reductase OS=Escherichia coli (st... [more]
OYE3_YEAST2.714e-3837.66NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05P07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838220 ID=CF838220; Name=CF838220; organism=Citrus sinensis; type=EST; length=808bp
CTCAATTTGCTTGCAATTCTACTAAACATGGGAAACAGAGCAGAGGAGGC
TAAGCAAAATCAAGAAGAGAACAACGGTAACATGGCCATTGAAACTCCCA
TCATCCCTCTTGTCACTCCTTACAATATGGGCAGTCTCAATCTTTCTCAT
AGAGTTGTTTTAGCACCATTGACTAGACAGAGATCATACAACAATGTTCC
TCAGCCACATGCCATTTTGTATTACTCTCAAAGAACCACCAAAGGGGGTT
TGCTTATAGCCGAAGCCACTGGAGTTTCCGACACTGCTCAAGGGTATCCA
GATACACCTGGTATCTGGACAAAGGAGCAAGTTGAAGCATGGAAACCGAT
TGTAGATGCTGTTCATGCCAAAGGTGGGATCTTCTTTTGTCAGATTGGGC
ACGTTGGCAGGGTTTCAAATCAAGATTATCAGCCAAATGGTCAAGCTCCA
ATTTCCTGTACAGACAAGCCATTGACACATCAAATCCGCACTAATGGTGT
TGATATTGCACAATTCACTCCTCCAAGGCGGCTAATGACATATGAAATCC
CTCAAATTGTGAATGATTTCAGGCTTGCTGCAAGAAATGCAATTGAGGCT
GGTTTCGATGGCATTGAGCTCCACGGTGCACATGGCTTCCTAATTGACCA
ATTTATGAAGGATCAAGTGAATGATCGAACAGACCAGTATGGAGGATCCT
TAGAGAACCGTTGCCGTTTTGCTTTAGAAATAGTTGAAGCTGTTTCCAAT
GAAATAGGGGCAGATAGGGTTGGGATAAGACTATCTCCGTTTGCAAACTA
TATGGAAT
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