CF838344
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: ALB3_ARATH (Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2) HSP 1 Score: 287.345 bits (734), Expect = 5.775e-77 Identity = 151/213 (70.89%), Postives = 163/213 (76.53%), Query Frame = 3 Query: 108 STRVRLSFQEXXXXXXXXXXXXXNSVFSRTESLLYXXXXXXXXXXXXXXXXXXXXXXXXXQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFGIPSLSGPTTIAARQSGSG 746 ST VR S E ++F+R ESLLY QK+GGWFGFIS+AME VLKILKDG+ AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL TEGFF IPSL GPT+IAARQSGSG Sbjct: 51 STTVRFSLNEIPPFHGLDSSVDIGAIFTRAESLLYTIADAAVVGADSVVTTDSSAV----QKSGGWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAARQSGSG 259
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: PPF1_PEA (Inner membrane protein PPF-1, chloroplastic OS=Pisum sativum GN=PPF-1 PE=2 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 2.194e-76 Identity = 150/218 (68.81%), Postives = 163/218 (74.77%), Query Frame = 3 Query: 93 NRRLASTRVRLSFQEXXXXXXXXXXXXXNSVFSRTESLLYXXXXXXXXXXXXXXXXXXXXXXXXXQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFGIPSLSGPTTIAARQSGSG 746 NR T+V+ SF + + +F+R E LLY QKNGGWFGFIS+ MEFVLK+LKDG+ +VHVPYSYGFAIILLTVIVK AT PLTK+QVESTLAMQNLQPKIKAIQ+RYAGNQERIQLETSRLY QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF IPSL GPT+IAARQSGSG Sbjct: 26 NRTRLFTKVQFSFHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATVAADAAASTDVAA------QKNGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSG 237
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: ALB31_ARATH (ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=ALB3L1 PE=2 SV=3) HSP 1 Score: 242.662 bits (618), Expect = 1.631e-63 Identity = 116/152 (76.32%), Postives = 138/152 (90.79%), Query Frame = 3 Query: 291 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFGIPSLSGPTTIAARQSGSG 746 ++ WF I+ ME +LK+LKDG+ VHVPYSYGFAIILLTV+VK ATFPLTKKQVES +AM++L P+IKAIQ+RYAG+QE+IQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFF IPSL+GPTT+AARQ+GSG Sbjct: 92 QSNDWFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSG 243
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: ALB32_CHLRE (Inner membrane ALBINO3-like protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.2 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.213e-50 Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 3 Query: 297 GGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFGIPSLSGPTTI 722 GG +++ EFVL+ L +G+++ +PYSYGFAII LTV+VKVATFPLT+KQVESTL++Q LQP++K +Q +YA + E +QLET+RLY++AGVNPLAGC PTLATIPV+IGLY ALSN A EGLLTEGFF IPSL GPTTI Sbjct: 71 GGPIDVLAQFFEFVLQTLDEGLESAKIPYSYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPRVKELQAKYADDPENLQLETARLYKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLLTEGFFWIPSLGGPTTI 212
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: ALB31_CHLRE (Inner membrane ALBINO3-like protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.1 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.859e-50 Identity = 94/154 (61.04%), Postives = 130/154 (84.42%), Query Frame = 3 Query: 288 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL-TEGFFGIPSLSGPTTIAARQSGSG 746 Q+ GGW +++A+E VL L++G+D +HVPYSYG++IILLT+IVK+ T+PLTK+QVES +A+Q L+P+I I+ R+ ++++IQ ETS LY QAGVNPLAGCLPTLATIP++IGL+ +L+NVAN+GLL T+GF+ +PSL+GPTT+A RQSG G Sbjct: 108 QRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLG 261
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_DESVV (Inner membrane protein oxaA OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=oxaA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.221e-19 Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 653 GWFGFI+ + +L + +YG AIILLT+++K+ +PL+ K +S M+ LQP + +++++A ++E++ E RLY+ VNP GCLP L IPV+ GLYQAL N Sbjct: 323 GWFGFIARPLVTLLDFFYKYVG------NYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLN 434
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_DESVH (Inner membrane protein oxaA OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=oxaA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.221e-19 Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 653 GWFGFI+ + +L + +YG AIILLT+++K+ +PL+ K +S M+ LQP + +++++A ++E++ E RLY+ VNP GCLP L IPV+ GLYQAL N Sbjct: 323 GWFGFIARPLVTLLDFFYKYVG------NYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLN 434
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_SYNFM (Inner membrane protein oxaA OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=oxaA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.206e-19 Identity = 46/117 (39.32%), Postives = 74/117 (63.25%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 650 GWF FI++ + +VL +++G AIILLT+++K+ +PLT+K +S M+ +QPK+ I+++Y G++E++ E LYR VNP+ GCLP L IPV+ LY+ L+ Sbjct: 338 GWFTFIAKPLVYVLDWF------YRYTHNWGVAIILLTIVIKILFWPLTQKSYQSMQKMKKIQPKMTQIREKYKGDREKMNQELMGLYRTYKVNPMGGCLPMLLQIPVFFALYRMLN 448
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_ANADF (Inner membrane protein oxaA OS=Anaeromyxobacter sp. (strain Fw109-5) GN=oxaA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.494e-19 Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 306 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFGIPSLS 707 F F + + FV++ L+ + ++G AIILLTV+VKV +PLT K ++S M+ LQP+I+ ++ ++ ++E++ L T +LY+Q VNPL GCLP L +P+W LY L L E F I L+ Sbjct: 337 FAFFARLLLFVMRWLE------RLVANWGLAIILLTVLVKVLLYPLTAKSMQSMNEMRKLQPEIEKLKAKHGNDREKLNLATMQLYQQHKVNPLGGCLPMLIQLPIWFALYATLQTSVE--LYREPFLWIHDLT 462
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_PELPD (Inner membrane protein oxaA OS=Pelobacter propionicus (strain DSM 2379) GN=oxaA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.224e-18 Identity = 54/147 (36.73%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFGIPSLSGPTTIAARQSG 740 GWF I++ + + LK + +YG AII++T+I+K FPLT K +S MQ +QP + A++++Y ++E + LYR VNPL GCLP L IPV+ LY+AL + E +F I LSGP + + G Sbjct: 326 GWFTVIAKPLLYTLKYFYRYVG------NYGVAIIIITIILKALFFPLTHKSYKSMKDMQKIQPMMAALKEKYKDDREGMNKAVMELYRDHKVNPLGGCLPMLVQIPVFFALYKALM-FSIELRHAPFYFWITDLSGPDNLFGQMLG 465 The following BLAST results are available for this feature:
BLAST of CF838344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 386
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838344 ID=CF838344; Name=CF838344; organism=Citrus sinensis; type=EST; length=748bpback to top |