CF838348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838348 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 468.774 bits (1205), Expect = 1.622e-131 Identity = 238/265 (89.81%), Postives = 238/265 (89.81%), Query Frame = 3 Query: 21 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETXXXXXXXXXXXLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGXXXXXXXXXXXXXXXXVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKN 815 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLET LIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTG VTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKN Sbjct: 1 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKN 265
BLAST of CF838348 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 464.537 bits (1194), Expect = 3.060e-130 Identity = 236/265 (89.06%), Postives = 237/265 (89.43%), Query Frame = 3 Query: 21 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETXXXXXXXXXXXLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGXXXXXXXXXXXXXXXXVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKN 815 MAAMVD+KPAASVQGTPLLATATLPVFTRGIYSTKRITLET LIIVTPA KGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTG VTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKN Sbjct: 1 MAAMVDSKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAEKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKN 265
BLAST of CF838348 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.319e-40 Identity = 97/251 (38.65%), Postives = 137/251 (54.58%), Query Frame = 3 Query: 51 ASVQGTPLLATATLPV-FTRGIYSTKRITLETXXXXXXXXXXXLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSK--TTGXXXXXXXXXXXXXXXXVTVIGTGLGGV-ARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDN 767 A+++ +P ++ P F G T I ++ + I P GT+ V+LF HG L N YS + +HIASHG+I+VAPQL + PP E++ A V W + L+ +LP + AN +++GHSRGG+TAFA++L + F A+IG+DPVAGT+K T V V+GTGLG + CAP NHEEF+ CK +++AHFVA DYGHMD+LDD+ Sbjct: 2 AAIEDSPTFSSVVTPAAFEIGSLPTTEIPVDPVENDSTAPPKPVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQL-CKLLPPGGQVEVDDAGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAGTNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNHEEFYKECK-ATKAHFVAADYGHMDMLDDD 250
BLAST of CF838348 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.722e-40 Identity = 94/225 (41.78%), Postives = 131/225 (58.22%), Query Frame = 3 Query: 177 LIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSL-RYGFGA------VIGLDPVAGTSK---TTGXXXXXXXXXXXXXXXXVTVIGTGLGGVAR--CITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKN 815 L++ TP +G + V++ LHG L N YS++ H++SHGFI++APQLY SI P +E+ S AE+ +WL GL LP N+S A+ GHSRGG+TAFA++L ++G+ + +IG+DPV GT K T + VIG+GLG AR CAP G NH EFF C+ + HFVA DYGH+D+LDD+ ++ + S CKN Sbjct: 45 LLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLY-SIAGPDTMDEIKSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSNLKISTLIGIDPVDGTGKGKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNHREFFRECQGPA-WHFVAKDYGHLDMLDDDTKGIRGKS-SYCLCKN 266
BLAST of CF838348 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.487e-39 Identity = 93/210 (44.29%), Postives = 129/210 (61.43%), Query Frame = 3 Query: 177 LIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPP--PSATNELNSAAEVAEWLPQGLQ---QNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-------FGAVIGLDPVAGTS--KTTGXXXXXXXXXXXXXXXXVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDD 764 LII++P G + V+LF+HGT LSN+ YS F++IASHGFIVVAP+L+ PP PS +E++ AA VA W+P LQ Q E ++ +A+ GHSRGG++AFAL+L + F A+IG+DPVAG S T VTVIG+GLG +CAP +H++F++ CK +S +HFV T YGHMD+L++ Sbjct: 63 LIIISPKEAGVYPVLLFIHGTMLSNEDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEIDMAASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALALGFSNIKLDVTFSALIGVDPVAGRSVDDRTLPHVLTYKPNSFNLSIPVTVIGSGLGNHT---ISCAPNHVSHQQFYDECKENS-SHFVITKYGHMDMLNE 268 The following BLAST results are available for this feature:
BLAST of CF838348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838348 ID=CF838348; Name=CF838348; organism=Citrus sinensis; type=EST; length=815bpback to top |