CF838385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.457e-54 Identity = 103/113 (91.15%), Postives = 109/113 (96.46%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 MSEFD IP+AFDPFAEANAEDSGAG+KDYVH+RVQQRNGRKSLTTVQGLKK++SYNKILKDLKKEFCCNGTV QDPELGQVIQLQGDQRKNVS+FLVQAGIVKKE IKIHGF Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 7.993e-53 Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV QDPELGQVIQLQGDQRKNVS FLVQAGIVKKE IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 7.993e-53 Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV QDPELGQVIQLQGDQRKNVS FLVQAGIVKKE IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.781e-52 Identity = 102/115 (88.70%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 MS+ D QIP+AFDPF+EANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTV QDPELGQVIQLQGDQRKNVS FLVQAGIVKKE IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 1.781e-52 Identity = 99/113 (87.61%), Postives = 108/113 (95.58%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 MSE D+Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTV QD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+ IKIHGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.037e-52 Identity = 102/115 (88.70%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSY+KILKDLKKEFCCNGTV QDPELGQVIQLQGDQRKNVS FLVQAGIVKKE IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 5.181e-52 Identity = 98/113 (86.73%), Postives = 108/113 (95.58%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 MSE D+Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTV QD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+ I+IHGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.154e-51 Identity = 97/113 (85.84%), Postives = 108/113 (95.58%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 MS+ + Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTV QD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+ IKIHGF Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 4.396e-43 Identity = 84/113 (74.34%), Postives = 96/113 (84.96%), Query Frame = 3 Query: 102 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 M + D QIP++FDPFAEA D+ +K+YVHIR+QQRNGRKSLTTVQGLKKE SY+KILKDLKK CCNGTV D ELG+VIQLQGDQRKNVSTF+VQAGIVKK+ IK+H F Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
BLAST of CF838385 vs. ExPASy Swiss-Prot
Match: EIF1B_PIG (Eukaryotic translation initiation factor 1b OS=Sus scrofa GN=EIF1B PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.956e-31 Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 3 Query: 132 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVGQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 440 +FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CNGTV + PE G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113 The following BLAST results are available for this feature:
BLAST of CF838385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838385 ID=CF838385; Name=CF838385; organism=Citrus sinensis; type=EST; length=517bpback to top |