CF838392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838392 vs. ExPASy Swiss-Prot
Match: UFC1_DICDI (Probable Ufm1-conjugating enzyme 1 OS=Dictyostelium discoideum GN=ufc1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.783e-55 Identity = 63/90 (70.00%), Postives = 76/90 (84.44%), Query Frame = 3 Query: 270 WYLRNLLKY*FDLQCDIPVTYPATDPELELPQLDGKTEKMYRGGKICLTVHFKPLWAKNCPRLGIAHALCLGLAPWLASEIPILADSGMI 539 WY+ N KY FDL+ D+PVTYP T PE+ +P+LDGKTEKMYRGGKICLT+HFKPLW++N P GIAHAL LGLAPWLA+E+P L D+G+I Sbjct: 69 WYIYNFKKYEFDLEFDMPVTYPETAPEIAIPELDGKTEKMYRGGKICLTIHFKPLWSRNVPHFGIAHALALGLAPWLAAEVPHLVDNGII 158 HSP 2 Score: 90.1225 bits (222), Expect = 1.783e-55 Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 65 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYQALIAYTLMNKSNDNNWFRISAVNPEGTRWTGK 265 D +TK T+ QIPLL+ KAGPRDG W RLKEEYQALI Y +NK DN+WF I + NP GTRW GK Sbjct: 2 DNHTKQTVQQIPLLTVKAGPRDGDKWIDRLKEEYQALIKYVEINKKADNDWFNIES-NPLGTRWQGK 67
BLAST of CF838392 vs. ExPASy Swiss-Prot
Match: UFC1_HUMAN (Ufm1-conjugating enzyme 1 OS=Homo sapiens GN=UFC1 PE=1 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 1.593e-50 Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 3 Query: 270 WYLRNLLKY*FDLQCDIPVTYPATDPELELPQLDGKTEKMYRGGKICLTVHFKPLWAKNCPRLGIAHALCLGLAPWLASEIPILADSGMI 539 WY+ +LLKY FD++ DIP+TYP T PE+ +P+LDGKT KMYRGGKICLT HFKPLWA+N P+ G+AH + LGL PWLA EIP L G+I Sbjct: 70 WYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVI 159 HSP 2 Score: 82.4185 bits (202), Expect = 1.593e-50 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 65 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYQALIAYTLMNKSNDNNWFRISAVNPEGTRWTGK 265 D T+ +++IP+L T AGPRD W QRLKEEYQ+LI Y NK+ DN+WFR+ + N EGTRW GK Sbjct: 3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGK 68
BLAST of CF838392 vs. ExPASy Swiss-Prot
Match: UFC1_BOVIN (Ufm1-conjugating enzyme 1 OS=Bos taurus GN=UFC1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.593e-50 Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 3 Query: 270 WYLRNLLKY*FDLQCDIPVTYPATDPELELPQLDGKTEKMYRGGKICLTVHFKPLWAKNCPRLGIAHALCLGLAPWLASEIPILADSGMI 539 WY+ +LLKY FD++ DIP+TYP T PE+ +P+LDGKT KMYRGGKICLT HFKPLWA+N P+ G+AH + LGL PWLA EIP L G+I Sbjct: 70 WYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVI 159 HSP 2 Score: 82.4185 bits (202), Expect = 1.593e-50 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 65 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYQALIAYTLMNKSNDNNWFRISAVNPEGTRWTGK 265 D T+ +++IP+L T AGPRD W QRLKEEYQ+LI Y NK+ DN+WFR+ + N EGTRW GK Sbjct: 3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGK 68
BLAST of CF838392 vs. ExPASy Swiss-Prot
Match: UFC1_MOUSE (Ufm1-conjugating enzyme 1 OS=Mus musculus GN=Ufc1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.812e-50 Identity = 56/90 (62.22%), Postives = 71/90 (78.89%), Query Frame = 3 Query: 270 WYLRNLLKY*FDLQCDIPVTYPATDPELELPQLDGKTEKMYRGGKICLTVHFKPLWAKNCPRLGIAHALCLGLAPWLASEIPILADSGMI 539 WY+ + LKY FD++ +IP+TYP T PE+ +P+LDGKT KMYRGGKICLT HFKPLWA+N P+ G+AH + LGL PWLA E+P L G+I Sbjct: 70 WYIHDFLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEVPDLIQKGVI 159 HSP 2 Score: 83.5741 bits (205), Expect = 7.812e-50 Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 65 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYQALIAYTLMNKSNDNNWFRISAVNPEGTRWTGK 265 D T+ +++IP+L T AGPRD W QRLKEEYQ+LI Y NK++DN+WFR+ + N EGTRW GK Sbjct: 3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNSDNDWFRLES-NKEGTRWFGK 68
BLAST of CF838392 vs. ExPASy Swiss-Prot
Match: UFC1_RAT (Ufm1-conjugating enzyme 1 OS=Rattus norvegicus GN=Ufc1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.730e-49 Identity = 56/90 (62.22%), Postives = 71/90 (78.89%), Query Frame = 3 Query: 270 WYLRNLLKY*FDLQCDIPVTYPATDPELELPQLDGKTEKMYRGGKICLTVHFKPLWAKNCPRLGIAHALCLGLAPWLASEIPILADSGMI 539 WY+ + LKY FD++ +IP+TYP T PE+ +P+LDGKT KMYRGGKICLT HFKPLWA+N P+ G+AH + LGL PWLA E+P L G+I Sbjct: 70 WYIHDFLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEVPDLIQKGVI 159 HSP 2 Score: 82.4185 bits (202), Expect = 1.730e-49 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 65 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYQALIAYTLMNKSNDNNWFRISAVNPEGTRWTGK 265 D T+ +++IP+L T AGPRD W QRLKEEYQ+LI Y NK+ DN+WFR+ + N EGTRW GK Sbjct: 3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGK 68
BLAST of CF838392 vs. ExPASy Swiss-Prot
Match: UFC1_CAEEL (Probable Ufm1-conjugating enzyme OS=Caenorhabditis elegans GN=C40H1.6 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 8.491e-49 Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 3 Query: 270 WYLRNLLKY*FDLQCDIPVTYPATDPELELPQLDGKTEKMYRGGKICLTVHFKPLWAKNCPRLGIAHALCLGLAPWLASEIPILADSGMI 539 WY N++KY FD++ DIP+TYP T PE+ LP+LDGKT KMYRGGKICL+ HFKPLWA+N P+ GIAHA LGL PW+A EIP L + G+I Sbjct: 69 WYFHNMVKYEFDVEFDIPITYPVTAPEIALPELDGKTAKMYRGGKICLSEHFKPLWARNTPKFGIAHAFALGLGPWMAVEIPDLIEKGLI 158 HSP 2 Score: 75.485 bits (184), Expect = 8.491e-49 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 65 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYQALIAYTLMNKSNDNNWFRISAVNPEGTRWTGK 265 D TKS+L IPL TKA PRDG W +RLKEEY+A+IA NK D +WF++ + N GT+W GK Sbjct: 2 DDATKSSLKAIPLCKTKASPRDGDLWIERLKEEYEAIIAAVQNNKDCDRDWFQLES-NERGTKWFGK 67 The following BLAST results are available for this feature:
BLAST of CF838392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838392 ID=CF838392; Name=CF838392; organism=Citrus sinensis; type=EST; length=541bpback to top |