CF838409

Overview
NameCF838409
Unique NameCF838409
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRC40_XENLA (Leucine-rich repeat-containing protein 40 OS=Xenopus laevis GN=lrrc40 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.965e-34
Identity = 86/249 (34.54%), Postives = 132/249 (53.01%), Query Frame = 3
Query:   69 ILKAARTSGXXXXXXXXXXDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            ++KAAR SG          +VP  V++ N D         + G  D+WWE  DL KLILA N ++ L ED+  LP L VL++  N+++ LP AI EL  L+ L++S N I ++P+E+     L  F    NQL+ELP S+G    L +   SNNC+ S+   +   + + K ++  NKLT L    I     L +L  + NLL  +P ++  +  L +L L QN++  +P  +     L E ++GNN +
Sbjct:   31 LIKAARKSGQLNLSARGLTEVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTE-IGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLKELHVGNNQI 277          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRC40_CHICK (Leucine-rich repeat-containing protein 40 OS=Gallus gallus GN=LRRC40 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.127e-33
Identity = 86/249 (34.54%), Postives = 136/249 (54.62%), Query Frame = 3
Query:   69 ILKAARTSGXXXXXXXXXXDVPNEVYK-NFDEA---------GEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            +++AAR SG          +VP  V++ N D           G  D+WWE  DL KLILA N +  L ED+R LP LTVL+V  N+L+ LP+A+G+L  L+ LDVS N +  IP+E+   + L       N+L  LP   G+ ++L +   SNN +T +P+  A    + +L++  N+L  L  + I++   L +L  +KN L  +P  + S++ L +L L +N++ S+P  +  C  L E + G N +
Sbjct:   31 LIRAARKSGQLNLAGRGLGEVPQHVWRINLDTPEEAHQNLSFGAADRWWEQTDLTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLKDLPAD-ISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLP-ELPSCKLLKELHAGENQI 277          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRC40_XENTR (Leucine-rich repeat-containing protein 40 OS=Xenopus tropicalis GN=lrrc40 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.922e-33
Identity = 86/249 (34.54%), Postives = 129/249 (51.81%), Query Frame = 3
Query:   69 ILKAARTSGXXXXXXXXXXDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            ++KAAR SG          DVP  V++ N D         + G  D+WWE  DL KLILA N ++ L ED+  LP L VL++  N++  LP AI EL  L+ L++S N I ++P E+     L       NQL+ELP S+G    L +   SNNC+ S+   +   + + K ++  NKLT L    I     L +L  + NLL  +P ++  +  L +L L QN++  +P  +     L E ++GNN +
Sbjct:   31 LIKAARKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTE-IGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLKELHVGNNQI 277          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRC40_DANRE (Leucine-rich repeat-containing protein 40 OS=Danio rerio GN=lrrc40 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31
Identity = 81/249 (32.53%), Postives = 131/249 (52.61%), Query Frame = 3
Query:   69 ILKAARTSGXXXXXXXXXXDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            +LKAAR SG          +VP  V++ N D   E          D+WWE  DL KL+L+ N ++ + +D++ LP L VL++  N+LS LP +IG+L  L+ L +S N + ++P  +   T L       N ++++P  LG+ +NL +   SNN +  +PE LA+   + KLD+  NKL  L    I+    L  L  S+N +  +P  +  +  L +L L  N++  +P  +  C +L E + GNN +
Sbjct:   29 LLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLP-PAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLP-ELPCCKTLKELHCGNNQI 275          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRC40_MOUSE (Leucine-rich repeat-containing protein 40 OS=Mus musculus GN=Lrrc40 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.861e-28
Identity = 83/249 (33.33%), Postives = 129/249 (51.81%), Query Frame = 3
Query:   69 ILKAARTSGXXXXXXXXXXDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            +LKAAR+SG          +VP  V++ N D   EA +       ++WW+  DL KLI++ N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S   L       N+L  +P        L D   S+N + ++P D A  S + +L++  N+L  L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L E ++  N +
Sbjct:   31 LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLKELHLAENQI 277          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRC40_HUMAN (Leucine-rich repeat-containing protein 40 OS=Homo sapiens GN=LRRC40 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.431e-28
Identity = 81/249 (32.53%), Postives = 127/249 (51.00%), Query Frame = 3
Query:   69 ILKAARTSGXXXXXXXXXXDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            +LKAAR SG          +VP  V++ N D           G  ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L  L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L E ++G N +
Sbjct:   31 LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKELHVGENQI 277          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRC40_PONAB (Leucine-rich repeat-containing protein 40 OS=Pongo abelii GN=LRRC40 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.175e-28
Identity = 81/249 (32.53%), Postives = 127/249 (51.00%), Query Frame = 3
Query:   69 ILKAARTSGXXXXXXXXXXDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            +LKAAR SG          +VP  V++ N D           G  ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L  L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L E ++G N +
Sbjct:   31 LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNELKSLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKELHVGENQI 277          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRC40_MACFA (Leucine-rich repeat-containing protein 40 OS=Macaca fascicularis GN=LRRC40 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.237e-28
Identity = 80/249 (32.13%), Postives = 126/249 (50.60%), Query Frame = 3
Query:   69 ILKAARTSGXXXXXXXXXXDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            +LKAAR SG          +VP  V++ N D           G  ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ LP+A+ EL  L+ L+VS N +   P+EI +   L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L  L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L E ++G N +
Sbjct:   31 LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKELHVGENQI 277          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: SHOC2_CHICK (Leucine-rich repeat protein SHOC-2 OS=Gallus gallus GN=SHOC2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.275e-26
Identity = 69/206 (33.50%), Postives = 115/206 (55.83%), Query Frame = 3
Query:  183 WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALS 788
            +    L  L L  N I  +++D++ L  LT+L++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS T +   D   N+L +LP ++G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L+
Sbjct:  189 YRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392          

HSP 2 Score: 111.309 bits (277), Expect = 6.196e-24
Identity = 63/199 (31.66%), Postives = 105/199 (52.76%), Query Frame = 3
Query:  192 VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 788
            V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I  +  +I + + L       N++K+LP+ +G   NL     ++N +  LPE++  C++++ LD++ N+L                          +PETIG+LS L RL L  NR+ +IP S++ C  L E  + NN +S
Sbjct:  146 VNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELL------------------------DLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNIS 320          

HSP 3 Score: 91.6633 bits (226), Expect = 5.080e-18
Identity = 66/250 (26.40%), Postives = 109/250 (43.60%), Query Frame = 3
Query:  186 EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL-------------------------------------------------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 788
            E  +L  L +AHN +E L E++ +   +T L++ HN+L +LP  IG L  L  L + +N +  IP  +   + L + +  +N +  LP  L                                                  R   LS     +N +TSLP D    + M +L++  N+LT +  + ++    L  LI S NLL  +P  IG+L +L  LDL +N++ S+P+ I+    L +  + NN L+
Sbjct:  236 ELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLT 484          

HSP 4 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 50/161 (31.06%), Postives = 81/161 (50.31%), Query Frame = 3
Query:  198 LQKLILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 677
            +  L + HN I K+   +     +L+ LN+  N+L+ LP   G    +  L+++ N + KIP+++    +L     S+N LK+LP  +G    L +     N + SLP ++A    + KL +  N+LT L    I   T LT L   +NLL  +PE IG +
Sbjct:  357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENLLTHLPEEIGKI 516          

HSP 5 Score: 75.8702 bits (185), Expect = 2.885e-13
Identity = 45/147 (30.61%), Postives = 77/147 (52.38%), Query Frame = 3
Query:  345 LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            LD++  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ L +  K+  LD+  NKL  +  +++   T L  L    N +  + + I +LS+L  L + +N+I  +P+ I   C+L    + +N L
Sbjct:  105 LDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIP-SVVYRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250          

HSP 6 Score: 75.485 bits (184), Expect = 3.768e-13
Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 3
Query:  180 WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 527
            W   V+L    LA N + K+ ED+  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++NQL  LP  +G   NL+      N +T LPE++
Sbjct:  401 WTSMVELN---LATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513          
BLAST of CF838409 vs. ExPASy Swiss-Prot
Match: LRRC1_MOUSE (Leucine-rich repeat-containing protein 1 OS=Mus musculus GN=Lrrc1 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.926e-25
Identity = 67/198 (33.84%), Postives = 111/198 (56.06%), Query Frame = 3
Query:  195 DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 788
            +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + ++P EIG+   L+  D S N+L+ LP  +    +L+    S N + ++PE +    K+S L ++ N+LT L    I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  I GCCSL  F + +N L+
Sbjct:  152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLT 348          

HSP 2 Score: 99.7525 bits (247), Expect = 1.866e-20
Identity = 72/241 (29.88%), Postives = 109/241 (45.23%), Query Frame = 3
Query:  129 VPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 785
            VP E+Y+             A  L++L+L  N + +L E    L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L                      I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL    +  N L
Sbjct:   27 VPEEIYRY------------ARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLL 255          
The following BLAST results are available for this feature:
BLAST of CF838409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
LRC40_XENLA2.965e-3434.54Leucine-rich repeat-containing protein 40 OS=Xenop... [more]
LRC40_CHICK1.127e-3334.54Leucine-rich repeat-containing protein 40 OS=Gallu... [more]
LRC40_XENTR1.922e-3334.54Leucine-rich repeat-containing protein 40 OS=Xenop... [more]
LRC40_DANRE1.377e-3132.53Leucine-rich repeat-containing protein 40 OS=Danio... [more]
LRC40_MOUSE1.861e-2833.33Leucine-rich repeat-containing protein 40 OS=Mus m... [more]
LRC40_HUMAN2.431e-2832.53Leucine-rich repeat-containing protein 40 OS=Homo ... [more]
LRC40_PONAB3.175e-2832.53Leucine-rich repeat-containing protein 40 OS=Pongo... [more]
LRC40_MACFA9.237e-2832.13Leucine-rich repeat-containing protein 40 OS=Macac... [more]
SHOC2_CHICK2.275e-2633.50Leucine-rich repeat protein SHOC-2 OS=Gallus gallu... [more]
LRRC1_MOUSE1.926e-2533.84Leucine-rich repeat-containing protein 1 OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838409 ID=CF838409; Name=CF838409; organism=Citrus sinensis; type=EST; length=789bp
TAAGCGAAGAAAATACATGTCGTCCGAGATAAAAACGAACACAAACATAA
ACACAGAGCATGGATCGGATACTGAAAGCTGCAAGAACCTCCGGTTCTCT
CAACCTATCAAATCGCTCTCTCAGGGATGTGCCCAATGAGGTATACAAAA
ATTTCGATGAGGCGGGAGAGGGCGACAAGTGGTGGGAGGCTGTGGATTTA
CAAAAGCTAATTTTGGCTCATAATAATATTGAAAAGTTGAAAGAGGATTT
GAGGAATTTGCCTTTACTGACAGTACTGAATGTTAGCCACAACAAACTCT
CTGAACTTCCAGCTGCAATTGGAGAGCTTCACATGCTGAAATCGTTAGAT
GTATCCTTTAATTCAATTATGAAAATACCAGACGAGATTGGATCAGCAAC
TGCCCTTGTCAAGTTTGATTGTTCAAGTAATCAGCTTAAAGAACTCCCAA
GCTCACTTGGAAGATGTTTAAATTTATCAGATTTCAAGGCATCAAACAAT
TGTATAACAAGCTTGCCAGAAGATCTTGCAGACTGTTCGAAAATGTCCAA
ACTGGATGTGGAGGGGAACAAGCTAACAGTTTTATCCAACAACTTGATAG
CATCATGGACCATGCTTACAGAACTCATTGCATCAAAAAATTTGCTGAAT
GGCATGCCGGAGACCATTGGAAGTCTTTCACGTCTCATTCGTCTTGACCT
TCATCAGAACAGAATTCTGTCAATCCCATCTTCAATATCGGGATGCTGTT
CCCTTGCAGAATTCTATATGGGGAATAATGCACTGTCTG
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