CF838455

Overview
NameCF838455
Unique NameCF838455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838455 vs. ExPASy Swiss-Prot
Match: ITPK2_ARATH (Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidopsis thaliana GN=ITPK2 PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 7.487e-62
Identity = 118/146 (80.82%), Postives = 131/146 (89.73%), Query Frame = 1
Query:  349 KLVVVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLTGKEWRQILEEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGS 786
            K ++VGYALTSKK KSFLQPKLEGLARNKGILFVAIDQN+PLS+QGPFDIVLHK  GKEWR+ILEE+R  HP+VTVLDPP AI HL NRQSMLQCVADMNLS+S G+V VP+QLVI++DASSIP+ V  AGL LPLVAKPLVADGS
Sbjct:   39 KSIIVGYALTSKKIKSFLQPKLEGLARNKGILFVAIDQNKPLSEQGPFDIVLHKQIGKEWRRILEEFRLAHPDVTVLDPPDAILHLRNRQSMLQCVADMNLSDSNGRVGVPKQLVIKKDASSIPEAVNNAGLRLPLVAKPLVADGS 184          
BLAST of CF838455 vs. ExPASy Swiss-Prot
Match: ITPK3_ARATH (Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana GN=ITPK3 PE=2 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 4.553e-51
Identity = 100/150 (66.67%), Postives = 124/150 (82.67%), Query Frame = 1
Query:  337 QQQSKLVVVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLTGKEWRQILEEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGS 786
            QQQ KLVV GYALTSKK KSFLQPKLE LAR KGI FVAID NRPLS+QGPFD+VLHKL GKEW +++E+Y+Q HPEVTVLDPP +IQ ++NRQSMLQ +AD+ LS+  G + VP+Q+V+ +D+++  D V++AGL  PLVAKPL  DG+
Sbjct:   76 QQQQKLVV-GYALTSKKKKSFLQPKLELLARRKGIFFVAIDLNRPLSEQGPFDVVLHKLLGKEWEEVIEDYQQKHPEVTVLDPPGSIQRIYNRQSMLQGMADLKLSDCSGSLFVPKQMVVLKDSAASADAVVEAGLKFPLVAKPLWIDGT 224          
BLAST of CF838455 vs. ExPASy Swiss-Prot
Match: ITPK1_MAIZE (Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.556e-30
Identity = 65/144 (45.14%), Postives = 98/144 (68.06%), Query Frame = 1
Query:  358 VVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLTGKEWRQILEEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADM-NLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGS 786
            V+GYAL  KK +SF+QP L   A ++G+  V +D ++PL++QGPF +++HKL G +WR  L  +   HP V ++DPP+AI  LHNR SMLQ V+++ + ++      +P Q+V+  DA+++ D  L A L  PL+AKPLVADG+
Sbjct:   20 VIGYALAPKKQQSFIQPSLVAQAASRGMDLVPVDASQPLAEQGPFHLLIHKLYGDDWRAQLVAFAARHPAVPIVDPPHAIDRLHNRISMLQVVSELDHAADQDSTFGIPSQVVV-YDAAALADFGLLAALRFPLIAKPLVADGT 162          
BLAST of CF838455 vs. ExPASy Swiss-Prot
Match: ITPK1_ARATH (Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidopsis thaliana GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.892e-22
Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 1
Query:  358 VVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLTGKEWRQILEEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADMNLSNSYG-KVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGS 786
            +VGYAL +KK  SF+QP L   +R +GI  V +D  + L +QG  D ++HKL    W++ L E+R+  P V V+D P AI+ LHNR SML+ +  +    S   +  VP Q+V+  D+S +        L  P++AKPL ADGS
Sbjct:   10 LVGYALAAKKQHSFIQPSLIEHSRQRGIDLVKLDPTKSLLEQGKLDCIIHKLYDVYWKENLHEFREKCPGVPVIDLPEAIERLHNRVSMLEVITQLRFPVSDSERFGVPEQVVV-MDSSVLSGGGALGELKFPVIAKPLDADGS 152          
BLAST of CF838455 vs. ExPASy Swiss-Prot
Match: ITPK1_DANRE (Inositol-tetrakisphosphate 1-kinase OS=Danio rerio GN=itpk1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.432e-12
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 1
Query:  361 VGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLT------------GKEWRQILEEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADMNLSNSYGKVDVPRQLVIERDAS-SIPDVVLKAGLTLPLVAKPLVADGS 786
            VGY L+ KK K         L R +GI  + +D ++P+  QGPFD+++HKLT                 Q +++Y   HPE  +LDP  AI+ L +R    + +  +  S    ++  P  +V++ +      + + K G+T P + KP VA G+
Sbjct:   10 VGYWLSEKKIKKLNFQTFVDLCRKQGIEMIQLDLSQPIESQGPFDVIIHKLTDHIVDADQNVTESLLLVQGVQDYIDAHPETVILDPLPAIRTLLDRCKSYKLIHKLEHSMEDDRICSPPFMVLKTECGFETLEQLHKHGITFPFICKPQVAHGT 164          
BLAST of CF838455 vs. ExPASy Swiss-Prot
Match: ITPK1_XENLA (Inositol-tetrakisphosphate 1-kinase OS=Xenopus laevis GN=itpk1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12
Identity = 47/156 (30.13%), Postives = 76/156 (48.72%), Query Frame = 1
Query:  361 VGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLT------------GKEWRQILEEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADMNLSNSYGKVDVP--RQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGS 786
            VGY ++ KK K         L R +GI  V ++  +P+ DQGP D+++HKLT              +  Q  ++Y + HPE  +LDP  AI+ L +R    + +  +       ++  P   +L+ E D  ++  ++ K GL  PLV K  VA G+
Sbjct:   10 VGYWMSEKKIKKLNFQAFADLCRKRGIEVVQLNLAKPIEDQGPLDVIIHKLTDVILEADQKDSESMQLVQRFQDYIEAHPETIILDPLPAIRTLLDRSKSYELIRRIETYMQDERICSPPFMELMAECDEDTL-KILEKNGLAFPLVCKTRVAHGT 164          
BLAST of CF838455 vs. ExPASy Swiss-Prot
Match: ITPK1_CHICK (Inositol-tetrakisphosphate 1-kinase OS=Gallus gallus GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 44/155 (28.39%), Postives = 68/155 (43.87%), Query Frame = 1
Query:  361 VGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLT------------GKEWRQILEEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADMNLSNSYGKV-DVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGS 786
            VGY L+ KK +         L R +G+  V +D  +P+ DQGP D+++HKLT              E  Q  +EY   HPE  +LDP  AI+ L +R    + +  +       ++   P   +          ++ K GL  P + K  VA G+
Sbjct:   10 VGYWLSEKKIRKLNFQAFAELCRKRGVEVVQLDLTKPIEDQGPLDVIIHKLTDVILEADQNDSQSLELVQRFQEYIDAHPETIILDPLPAIRTLLDRSKSYELIRQIEAYMQDERICSPPFMELTSACGEDTLQLIEKNGLAFPFICKTRVAHGT 164          
The following BLAST results are available for this feature:
BLAST of CF838455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ITPK2_ARATH7.487e-6280.82Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidops... [more]
ITPK3_ARATH4.553e-5166.67Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidops... [more]
ITPK1_MAIZE7.556e-3045.14Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays ... [more]
ITPK1_ARATH9.892e-2240.97Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidops... [more]
ITPK1_DANRE1.432e-1229.68Inositol-tetrakisphosphate 1-kinase OS=Danio rerio... [more]
ITPK1_XENLA5.440e-1230.13Inositol-tetrakisphosphate 1-kinase OS=Xenopus lae... [more]
ITPK1_CHICK4.606e-1128.39Inositol-tetrakisphosphate 1-kinase OS=Gallus gall... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_06K05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06K05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838455 ID=CF838455; Name=CF838455; organism=Citrus sinensis; type=EST; length=786bp
AGGGTTACATAAAACGCATTGGGAGTCTGTTGTTTATTTAGTGTCTTTTA
CTTTGTTTCTTTCTCTCGCTCTGCCTCTCTCTCCGTCTCTCGTCTCGTAT
TGTATCGTATCATCGTCTCGCTTATCGGATCTTCAAAACCGAACCAAGAC
TGTTTCTAGAGAATTCTTCGCATTCTATCCGTCCGGTCTCTCTCATTTTT
TTTTTTTTTGGGTTTGGTCTAGTTTTATAAAACCAAAATTAAATTTAAAA
AATAAAAGGGAAGAGAAATGAGGATGATGAAGGAGGAAATTGAAGAGCAA
ACTAGAGAGGAGGAATTACTCTCGTTTCCTCAAACTCAGCAGCAATCCAA
ATTAGTTGTTGTTGGTTACGCTCTTACCTCCAAGAAGACTAAGAGCTTCT
TGCAGCCTAAGCTTGAAGGCTTGGCTAGGAATAAGGGAATATTATTTGTT
GCGATTGACCAGAACCGACCACTTTCAGATCAGGGCCCTTTTGACATTGT
GCTGCATAAGTTAACCGGGAAAGAGTGGCGCCAGATTCTCGAGGAATACA
GGCAAACACATCCAGAAGTCACAGTTCTTGATCCTCCATATGCTATTCAA
CACTTGCACAACCGTCAATCCATGCTTCAGTGTGTAGCTGATATGAATCT
GTCTAACTCCTATGGTAAAGTTGATGTTCCCAGACAATTAGTTATTGAAA
GAGATGCATCATCGATCCCTGATGTGGTTTTGAAAGCTGGACTGACTCTA
CCCCTAGTTGCAAAGCCGTTGGTTGCTGATGGGAGT
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